BLASTX nr result

ID: Coptis23_contig00017599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017599
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307463.1| predicted protein [Populus trichocarpa] gi|2...   304   3e-80
ref|XP_002520296.1| protein binding protein, putative [Ricinus c...   299   9e-79
ref|XP_002300959.1| predicted protein [Populus trichocarpa] gi|2...   299   9e-79
ref|XP_002285888.1| PREDICTED: BTB/POZ domain-containing protein...   297   3e-78
emb|CBI18956.3| unnamed protein product [Vitis vinifera]              295   1e-77

>ref|XP_002307463.1| predicted protein [Populus trichocarpa] gi|222856912|gb|EEE94459.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  304 bits (778), Expect = 3e-80
 Identities = 162/245 (66%), Positives = 190/245 (77%), Gaps = 8/245 (3%)
 Frame = -2

Query: 939 MKCISCREEYGARDAGTCKXXXXXXXXXXXXXXXXXXELKAKASFLKFSSPIDH----RS 772
           M+CISC+E YG  DAGTCK                  +LKAK +FL+F SP+DH    RS
Sbjct: 1   MRCISCKEYYGRCDAGTCKECYEEASETEEELKREIDDLKAKVAFLRFWSPLDHHITYRS 60

Query: 771 SS--CFTDVLLVAS--DGVVNEIGSPSVSAHKAILASRSPVFKAMLENEMEESRSGTIKI 604
           S+  CFTDV+LVAS  DG+     S  V AHKA+L SRSPVFKAMLENEMEESRSGTIKI
Sbjct: 61  SAGPCFTDVVLVASSDDGLTGTAPSVPVPAHKAVLVSRSPVFKAMLENEMEESRSGTIKI 120

Query: 603 SEVTYDALRSFVQYLYTAEVSLDEQMACDLLVLAEKYQVKHLKSHCETFLTSKLNAENAF 424
           S+V+YDALR+FV Y YTAE  LDEQMA DLL+LAEKYQVKHLK++CE FL SKLN EN+ 
Sbjct: 121 SDVSYDALRTFVNYFYTAEACLDEQMAYDLLILAEKYQVKHLKAYCEKFLVSKLNWENSV 180

Query: 423 MCFAFSSQHNAKNLHEASLSLITENMDKLTKQEEYQELVDKDPRLVVGIYEAYLAKQVNT 244
           + +AF+ QHNAK++ EA+LSLIT+NMDKLTK+EEY ELV+KDPRLVV IYEAYL+KQ+NT
Sbjct: 181 VSYAFAHQHNAKHMLEAALSLITDNMDKLTKREEYMELVEKDPRLVVEIYEAYLSKQINT 240

Query: 243 AAAKD 229
           AA KD
Sbjct: 241 AAHKD 245


>ref|XP_002520296.1| protein binding protein, putative [Ricinus communis]
           gi|223540515|gb|EEF42082.1| protein binding protein,
           putative [Ricinus communis]
          Length = 267

 Score =  299 bits (765), Expect = 9e-79
 Identities = 160/244 (65%), Positives = 187/244 (76%), Gaps = 8/244 (3%)
 Frame = -2

Query: 939 MKCISCREEYGARDAGTCKXXXXXXXXXXXXXXXXXXELKAKASFLKFSSPIDHRSSS-- 766
           M+CISC+EEYG  DAGTCK                  +LKAK +FL+F SP+DH  S+  
Sbjct: 24  MRCISCKEEYGTIDAGTCKECYEEASETEEELKREIEDLKAKVAFLRFWSPLDHHHSNRS 83

Query: 765 ---CFTDVLLVAS--DGVVNEIGSP-SVSAHKAILASRSPVFKAMLENEMEESRSGTIKI 604
              CFTDV+L+AS  DG     GSP  V AHKA+L SRSPVFKAMLENEMEES SGTIKI
Sbjct: 84  TGPCFTDVVLIASSDDGPT---GSPVPVPAHKAVLVSRSPVFKAMLENEMEESHSGTIKI 140

Query: 603 SEVTYDALRSFVQYLYTAEVSLDEQMACDLLVLAEKYQVKHLKSHCETFLTSKLNAENAF 424
           S+V+YDALR F+ YLYTAE  LDEQMACDLLVLAEKYQVKHLK++CE FL SKLN  N+ 
Sbjct: 141 SDVSYDALRMFINYLYTAEACLDEQMACDLLVLAEKYQVKHLKAYCEKFLVSKLNWNNSV 200

Query: 423 MCFAFSSQHNAKNLHEASLSLITENMDKLTKQEEYQELVDKDPRLVVGIYEAYLAKQVNT 244
             +AF+  HNAK++ EA+LSLIT+NMDKLTK+EEY+ELV+KDPRLVV IYEAYL+KQVNT
Sbjct: 201 PSYAFAHLHNAKHMTEAALSLITDNMDKLTKREEYKELVEKDPRLVVEIYEAYLSKQVNT 260

Query: 243 AAAK 232
           AA +
Sbjct: 261 AAPR 264


>ref|XP_002300959.1| predicted protein [Populus trichocarpa] gi|222842685|gb|EEE80232.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  299 bits (765), Expect = 9e-79
 Identities = 163/247 (65%), Positives = 192/247 (77%), Gaps = 10/247 (4%)
 Frame = -2

Query: 939 MKCISCREEYGARDAGTCKXXXXXXXXXXXXXXXXXXELKAKASFLKFSSPID----HRS 772
           M+CISC+E Y   DAGTCK                  +LKAK +FL+F SP+D    HRS
Sbjct: 24  MRCISCKEYYSRCDAGTCKECYEEASDTEEELKREIEDLKAKVAFLRFWSPLDLHITHRS 83

Query: 771 SS--CFTDVLLVAS--DGVVNEIGSPSVS--AHKAILASRSPVFKAMLENEMEESRSGTI 610
            +  CFTDV+L+AS  DG    IG+PSV   AHKA+L SRSPVFKAMLENEMEESRSGTI
Sbjct: 84  PAGPCFTDVVLIASSDDGF---IGTPSVPVPAHKAVLVSRSPVFKAMLENEMEESRSGTI 140

Query: 609 KISEVTYDALRSFVQYLYTAEVSLDEQMACDLLVLAEKYQVKHLKSHCETFLTSKLNAEN 430
           KIS+V+YDALRSFV YLYTAE  LDEQMACDLLVLAEKY+VKHLK++CE FL SKLN +N
Sbjct: 141 KISDVSYDALRSFVNYLYTAEACLDEQMACDLLVLAEKYEVKHLKAYCEKFLVSKLNWDN 200

Query: 429 AFMCFAFSSQHNAKNLHEASLSLITENMDKLTKQEEYQELVDKDPRLVVGIYEAYLAKQV 250
           + M +AF+ QHNAK++ E +LSLIT+NMDKLTK++EY ELV++DPRLVV IYEAYL+KQV
Sbjct: 201 SVMSYAFAHQHNAKHMLETALSLITDNMDKLTKRKEYIELVEEDPRLVVEIYEAYLSKQV 260

Query: 249 NTAAAKD 229
           NTAA KD
Sbjct: 261 NTAAHKD 267


>ref|XP_002285888.1| PREDICTED: BTB/POZ domain-containing protein At4g08455-like [Vitis
           vinifera]
          Length = 264

 Score =  297 bits (760), Expect = 3e-78
 Identities = 158/243 (65%), Positives = 186/243 (76%)
 Frame = -2

Query: 957 ETVVVKMKCISCREEYGARDAGTCKXXXXXXXXXXXXXXXXXXELKAKASFLKFSSPIDH 778
           ET    M+CISCRE+YG  DAGTCK                  ELKAK +FL+ SSP+DH
Sbjct: 18  ETETELMRCISCREDYGRIDAGTCKECYEEASETEEELKREIEELKAKVAFLRCSSPLDH 77

Query: 777 RSSSCFTDVLLVASDGVVNEIGSPSVSAHKAILASRSPVFKAMLENEMEESRSGTIKISE 598
                F+DV+LVAS+       +P V AHK++LASRSPVFKAMLENEMEES SGTIKIS+
Sbjct: 78  SHRRSFSDVILVASNDDSAASAAP-VPAHKSVLASRSPVFKAMLENEMEESLSGTIKISD 136

Query: 597 VTYDALRSFVQYLYTAEVSLDEQMACDLLVLAEKYQVKHLKSHCETFLTSKLNAENAFMC 418
           V+Y+ALR FV YLYTAE  LDE MACDLLVLAEKYQVKHLK++CE F+ SKLN +N+ + 
Sbjct: 137 VSYEALRCFVNYLYTAEACLDEPMACDLLVLAEKYQVKHLKAYCEKFMVSKLNWDNSVIS 196

Query: 417 FAFSSQHNAKNLHEASLSLITENMDKLTKQEEYQELVDKDPRLVVGIYEAYLAKQVNTAA 238
           FAF+ QHNAK L +A+LS+IT+NMDKLTK+EEY ELV+KDPRLVV IYEAYL+KQVNTAA
Sbjct: 197 FAFAHQHNAKLLIDAALSVITDNMDKLTKREEYIELVEKDPRLVVEIYEAYLSKQVNTAA 256

Query: 237 AKD 229
            KD
Sbjct: 257 HKD 259


>emb|CBI18956.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  295 bits (756), Expect = 1e-77
 Identities = 156/237 (65%), Positives = 184/237 (77%)
 Frame = -2

Query: 939 MKCISCREEYGARDAGTCKXXXXXXXXXXXXXXXXXXELKAKASFLKFSSPIDHRSSSCF 760
           M+CISCRE+YG  DAGTCK                  ELKAK +FL+ SSP+DH     F
Sbjct: 1   MRCISCREDYGRIDAGTCKECYEEASETEEELKREIEELKAKVAFLRCSSPLDHSHRRSF 60

Query: 759 TDVLLVASDGVVNEIGSPSVSAHKAILASRSPVFKAMLENEMEESRSGTIKISEVTYDAL 580
           +DV+LVAS+       +P V AHK++LASRSPVFKAMLENEMEES SGTIKIS+V+Y+AL
Sbjct: 61  SDVILVASNDDSAASAAP-VPAHKSVLASRSPVFKAMLENEMEESLSGTIKISDVSYEAL 119

Query: 579 RSFVQYLYTAEVSLDEQMACDLLVLAEKYQVKHLKSHCETFLTSKLNAENAFMCFAFSSQ 400
           R FV YLYTAE  LDE MACDLLVLAEKYQVKHLK++CE F+ SKLN +N+ + FAF+ Q
Sbjct: 120 RCFVNYLYTAEACLDEPMACDLLVLAEKYQVKHLKAYCEKFMVSKLNWDNSVISFAFAHQ 179

Query: 399 HNAKNLHEASLSLITENMDKLTKQEEYQELVDKDPRLVVGIYEAYLAKQVNTAAAKD 229
           HNAK L +A+LS+IT+NMDKLTK+EEY ELV+KDPRLVV IYEAYL+KQVNTAA KD
Sbjct: 180 HNAKLLIDAALSVITDNMDKLTKREEYIELVEKDPRLVVEIYEAYLSKQVNTAAHKD 236


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