BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017598
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159374.1| PREDICTED: LOW QUALITY PROTEIN: RRP12-like p...   132   4e-29
ref|XP_004144131.1| PREDICTED: RRP12-like protein-like [Cucumis ...   132   4e-29
ref|XP_002267256.2| PREDICTED: RRP12-like protein-like [Vitis vi...   125   5e-27
ref|XP_003590720.1| RRP12-like protein [Medicago truncatula] gi|...   122   3e-26
ref|XP_003590714.1| RRP12-like protein [Medicago truncatula] gi|...   117   1e-24

>ref|XP_004159374.1| PREDICTED: LOW QUALITY PROTEIN: RRP12-like protein-like [Cucumis
           sativus]
          Length = 1265

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/129 (48%), Positives = 94/129 (72%)
 Frame = -1

Query: 389 GLEMDTIVSTIEENEDIGNTVLFRYTNSTQEDHQHLCAVVGAMSQELKDQKLPLTPITYF 210
           GLEM+      E N+D  N++LFR+++ST E+HQHLCAV+GAM+QEL+DQ LP TP+ YF
Sbjct: 5   GLEMEASFD-FESNDDFCNSILFRFSDSTNEEHQHLCAVIGAMAQELRDQSLPSTPLAYF 63

Query: 209 GATISSLDRLSTDPKQADSVITALLTFLSMVLPQILVAVLRKRRAFVMEPVLRVIRFEDM 30
           GAT SSLDR+S++P+ +  ++ ALLT LS++LP+I   +L K++ F+   ++RV+R   +
Sbjct: 64  GATCSSLDRISSEPEPSPHLLEALLTILSLLLPRISSPILNKKKDFLSYLLIRVLRVPSL 123

Query: 29  SVAAVNAGL 3
           +  A   GL
Sbjct: 124 TPGAATFGL 132


>ref|XP_004144131.1| PREDICTED: RRP12-like protein-like [Cucumis sativus]
          Length = 1264

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/129 (48%), Positives = 94/129 (72%)
 Frame = -1

Query: 389 GLEMDTIVSTIEENEDIGNTVLFRYTNSTQEDHQHLCAVVGAMSQELKDQKLPLTPITYF 210
           GLEM+      E N+D  N++LFR+++ST E+HQHLCAV+GAM+QEL+DQ LP TP+ YF
Sbjct: 5   GLEMEASFD-FESNDDFCNSILFRFSDSTNEEHQHLCAVIGAMAQELRDQSLPSTPLAYF 63

Query: 209 GATISSLDRLSTDPKQADSVITALLTFLSMVLPQILVAVLRKRRAFVMEPVLRVIRFEDM 30
           GAT SSLDR+S++P+ +  ++ ALLT LS++LP+I   +L K++ F+   ++RV+R   +
Sbjct: 64  GATCSSLDRISSEPEPSPHLLEALLTILSLLLPRISSPILNKKKDFLSYLLIRVLRVPSL 123

Query: 29  SVAAVNAGL 3
           +  A   GL
Sbjct: 124 TPGAATFGL 132


>ref|XP_002267256.2| PREDICTED: RRP12-like protein-like [Vitis vinifera]
          Length = 1439

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/123 (52%), Positives = 88/123 (71%)
 Frame = -1

Query: 386 LEMDTIVSTIEENEDIGNTVLFRYTNSTQEDHQHLCAVVGAMSQELKDQKLPLTPITYFG 207
           +EM+     ++E +  G+ +L R++NSTQE+HQHLC V+G MSQELKDQ L  TP+TYFG
Sbjct: 171 IEMEVPQFQMDETDFCGS-ILSRFSNSTQEEHQHLCTVLGTMSQELKDQNLSTTPVTYFG 229

Query: 206 ATISSLDRLSTDPKQADSVITALLTFLSMVLPQILVAVLRKRRAFVMEPVLRVIRFEDMS 27
            T SSLDRLS+DP      I +LLT LSMVLP+I  A+L+K+R F+ E ++RV+R +   
Sbjct: 230 VTCSSLDRLSSDPDSPTHSIDSLLTILSMVLPRISPAILKKKREFLSELLVRVLRSKSPP 289

Query: 26  VAA 18
            A+
Sbjct: 290 AAS 292


>ref|XP_003590720.1| RRP12-like protein [Medicago truncatula]
           gi|355479768|gb|AES60971.1| RRP12-like protein [Medicago
           truncatula]
          Length = 589

 Score =  122 bits (306), Expect = 3e-26
 Identities = 63/129 (48%), Positives = 90/129 (69%)
 Frame = -1

Query: 389 GLEMDTIVSTIEENEDIGNTVLFRYTNSTQEDHQHLCAVVGAMSQELKDQKLPLTPITYF 210
           G+EM+      E N+DI N++L R++NST  +HQHLCAV+GAMSQELKD  L  +P+ YF
Sbjct: 3   GIEMEESTFNNESNDDICNSILSRFSNSTAVNHQHLCAVIGAMSQELKDHNLSSSPVAYF 62

Query: 209 GATISSLDRLSTDPKQADSVITALLTFLSMVLPQILVAVLRKRRAFVMEPVLRVIRFEDM 30
            AT SSLDR +++P     ++ ALLTFLS+V+ ++ VAVL+++R F+ E V +V+     
Sbjct: 63  CATCSSLDRTASEPNPPIHLMDALLTFLSIVMFKVPVAVLKEKREFLSELVTKVVMLPSS 122

Query: 29  SVAAVNAGL 3
           S +AV  GL
Sbjct: 123 SESAVVHGL 131


>ref|XP_003590714.1| RRP12-like protein [Medicago truncatula]
           gi|355479762|gb|AES60965.1| RRP12-like protein [Medicago
           truncatula]
          Length = 1328

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/115 (49%), Positives = 81/115 (70%)
 Frame = -1

Query: 389 GLEMDTIVSTIEENEDIGNTVLFRYTNSTQEDHQHLCAVVGAMSQELKDQKLPLTPITYF 210
           G+EM+      E N+DI N++L R++ ST   HQHLC V+GAMSQELKD  LP TP+ YF
Sbjct: 3   GIEMEQPTFNNESNDDICNSILSRFSKSTAVSHQHLCTVIGAMSQELKDHNLPSTPVAYF 62

Query: 209 GATISSLDRLSTDPKQADSVITALLTFLSMVLPQILVAVLRKRRAFVMEPVLRVI 45
           GAT SSL+R+  +P   D VI +L+T LS+V+ ++ +AVL+K R  + E +++VI
Sbjct: 63  GATCSSLNRIVPEPNPPDHVIDSLVTILSIVIVKVPMAVLKKERESLSELIVKVI 117