BLASTX nr result

ID: Coptis23_contig00017584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017584
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002437784.1| hypothetical protein SORBIDRAFT_10g002510 [S...    80   2e-13
ref|XP_002511735.1| Kinesin-II 85 kDa subunit, putative [Ricinus...    78   6e-13
ref|XP_002320731.1| predicted protein [Populus trichocarpa] gi|2...    78   6e-13
ref|XP_004147564.1| PREDICTED: armadillo repeat-containing kines...    78   8e-13
sp|Q5VQ09.1|ARK2_ORYSJ RecName: Full=Armadillo repeat-containing...    78   8e-13

>ref|XP_002437784.1| hypothetical protein SORBIDRAFT_10g002510 [Sorghum bicolor]
           gi|241916007|gb|EER89151.1| hypothetical protein
           SORBIDRAFT_10g002510 [Sorghum bicolor]
          Length = 903

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 47/82 (57%), Positives = 52/82 (63%)
 Frame = -1

Query: 248 GGXXXXXXXXXXSEDEMIRRVVANAIANLAMNCECLMSLIHSTLITETNKELIMDQGGIS 69
           GG          SEDE IRRV A AIANLAMN              ETN++LIMDQGG++
Sbjct: 686 GGLTSLLTLLRSSEDETIRRVAAGAIANLAMN--------------ETNQDLIMDQGGVT 731

Query: 68  LLLMTAADVNDPQTLRMVAGAI 3
           LL MTA+D  DPQTLRMVAGAI
Sbjct: 732 LLSMTASDAEDPQTLRMVAGAI 753


>ref|XP_002511735.1| Kinesin-II 85 kDa subunit, putative [Ricinus communis]
           gi|223548915|gb|EEF50404.1| Kinesin-II 85 kDa subunit,
           putative [Ricinus communis]
          Length = 896

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 47/82 (57%), Positives = 49/82 (59%)
 Frame = -1

Query: 248 GGXXXXXXXXXXSEDEMIRRVVANAIANLAMNCECLMSLIHSTLITETNKELIMDQGGIS 69
           GG           EDE +RRV A AIANLAMN              E N+ELIM QGGIS
Sbjct: 679 GGLTSLLMLLRSFEDETVRRVAAGAIANLAMN--------------EANQELIMAQGGIS 724

Query: 68  LLLMTAADVNDPQTLRMVAGAI 3
           LL MTAAD  DPQTLRMVAGAI
Sbjct: 725 LLSMTAADAEDPQTLRMVAGAI 746


>ref|XP_002320731.1| predicted protein [Populus trichocarpa] gi|222861504|gb|EEE99046.1|
           predicted protein [Populus trichocarpa]
          Length = 905

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 48/82 (58%), Positives = 49/82 (59%)
 Frame = -1

Query: 248 GGXXXXXXXXXXSEDEMIRRVVANAIANLAMNCECLMSLIHSTLITETNKELIMDQGGIS 69
           GG           EDE IRRV A AIANLAMN              E N+ELIM QGGIS
Sbjct: 688 GGLTSLLMLLRSFEDETIRRVAAGAIANLAMN--------------EANQELIMVQGGIS 733

Query: 68  LLLMTAADVNDPQTLRMVAGAI 3
           LL MTAAD  DPQTLRMVAGAI
Sbjct: 734 LLSMTAADAEDPQTLRMVAGAI 755


>ref|XP_004147564.1| PREDICTED: armadillo repeat-containing kinesin-like protein 3-like
           [Cucumis sativus] gi|449513383|ref|XP_004164312.1|
           PREDICTED: armadillo repeat-containing kinesin-like
           protein 3-like [Cucumis sativus]
          Length = 906

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 47/82 (57%), Positives = 51/82 (62%)
 Frame = -1

Query: 248 GGXXXXXXXXXXSEDEMIRRVVANAIANLAMNCECLMSLIHSTLITETNKELIMDQGGIS 69
           GG          +EDE I RV A AIANLAMN              ETN+ELIM QGGIS
Sbjct: 689 GGLTSLLMLLRSTEDETIHRVAAGAIANLAMN--------------ETNQELIMSQGGIS 734

Query: 68  LLLMTAADVNDPQTLRMVAGAI 3
           LL MTAA+ +DPQTLRMVAGAI
Sbjct: 735 LLSMTAANADDPQTLRMVAGAI 756


>sp|Q5VQ09.1|ARK2_ORYSJ RecName: Full=Armadillo repeat-containing kinesin-like protein 2
           gi|55296991|dbj|BAD68466.1| putative kinesin [Oryza
           sativa Japonica Group] gi|125553964|gb|EAY99569.1|
           hypothetical protein OsI_21543 [Oryza sativa Indica
           Group]
          Length = 891

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 47/82 (57%), Positives = 51/82 (62%)
 Frame = -1

Query: 248 GGXXXXXXXXXXSEDEMIRRVVANAIANLAMNCECLMSLIHSTLITETNKELIMDQGGIS 69
           GG          SEDE IRRV A AIANLAMN              ETN++LIM QGG+S
Sbjct: 674 GGLTSLLMLLRSSEDETIRRVAAGAIANLAMN--------------ETNQDLIMAQGGVS 719

Query: 68  LLLMTAADVNDPQTLRMVAGAI 3
           LL MTA+D  DPQTLRMVAGAI
Sbjct: 720 LLSMTASDAEDPQTLRMVAGAI 741


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