BLASTX nr result

ID: Coptis23_contig00017582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017582
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25767.3| unnamed protein product [Vitis vinifera]               72   4e-11
ref|XP_002303367.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
emb|CAN67292.1| hypothetical protein VITISV_040598 [Vitis vinifera]    66   3e-09
ref|XP_002532354.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
ref|XP_004147260.1| PREDICTED: uncharacterized protein LOC101212...    63   3e-08

>emb|CBI25767.3| unnamed protein product [Vitis vinifera]
          Length = 644

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = +3

Query: 15  EMKIPGSSCSASLLSEPPDIRNWFSSYVYESPALDTEDELKCFISKKSELEKVGFDTEEH 194
           + ++ GSS S SL SEPPDIRNWFSSY YESPA DT ++  C   K S+ EK   DTEE 
Sbjct: 9   DSQVLGSSFSLSLPSEPPDIRNWFSSYEYESPASDTLNDFGCSSFKGSQCEKEELDTEES 68

Query: 195 NEFGTKGICLGKRQSTPKVCDEETFGGK 278
           N    K   LG+  +T ++ DE   G K
Sbjct: 69  NR--VKDENLGEFMNT-ELIDELASGEK 93


>ref|XP_002303367.1| predicted protein [Populus trichocarpa] gi|222840799|gb|EEE78346.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/57 (61%), Positives = 39/57 (68%)
 Frame = +3

Query: 21  KIPGSSCSASLLSEPPDIRNWFSSYVYESPALDTEDELKCFISKKSELEKVGFDTEE 191
           K+P S CS SLLSEPPDIRNWF SY YESP LDT +     + K+SE E  GF  EE
Sbjct: 100 KMPDSLCSLSLLSEPPDIRNWFPSYEYESPVLDTAEYFIESVIKESEGENDGFAIEE 156



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
 Frame = +3

Query: 21  KIPGSSCSASLLSEPPDIRNWFSSYVYESPALDTEDELKCFISKKSELEKVGF-DTEEHN 197
           K+P SS S+S LSEPPDIRNWF SYVYESP L    E   F+  K+E E   F + +   
Sbjct: 206 KVPDSSQSSSFLSEPPDIRNWFPSYVYESPVL---GESVGFLHDKTEREGDDFANQDSKR 262

Query: 198 EFGTKGICLGKRQSTPKVCDEETF------GGKHKEENSSSRLEQS 317
           +  T    LG+ +S+ ++     F       G+HK+E   +++  S
Sbjct: 263 DKETNSWKLGQNRSSDEIEHSNGFLKFNSSLGEHKQEKLLNKVSPS 308


>emb|CAN67292.1| hypothetical protein VITISV_040598 [Vitis vinifera]
          Length = 352

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 42/88 (47%), Positives = 52/88 (59%)
 Frame = +3

Query: 15  EMKIPGSSCSASLLSEPPDIRNWFSSYVYESPALDTEDELKCFISKKSELEKVGFDTEEH 194
           + ++ GSS S SL SEPPDIRNWFSSY YESPA D  ++      K S+ EK   DTEE 
Sbjct: 9   DSQVLGSSXSLSLPSEPPDIRNWFSSYEYESPASDXLNDFGXSSFKGSQCEKEELDTEES 68

Query: 195 NEFGTKGICLGKRQSTPKVCDEETFGGK 278
           N    K   LG+  +T ++ DE   G K
Sbjct: 69  NR--VKDENLGEFXNT-ELIDELASGEK 93


>ref|XP_002532354.1| conserved hypothetical protein [Ricinus communis]
           gi|223527941|gb|EEF30027.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 534

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/50 (60%), Positives = 39/50 (78%)
 Frame = +3

Query: 48  SLLSEPPDIRNWFSSYVYESPALDTEDELKCFISKKSELEKVGFDTEEHN 197
           + L++PP IRNWFSSYVYESP LDT D+LK  ++K+ E EK G  +EE+N
Sbjct: 107 TFLAKPPHIRNWFSSYVYESPELDTLDDLKLSVTKECEYEK-GMASEENN 155



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
 Frame = +3

Query: 21  KIPGSSCSASLLSEPPDIRNWFSSYVYESPALDTEDELKCFISKKSELEKVGFDTEEHNE 200
           +IP SS S+ +L EPPDIRNW+ SYV+ESP      E    + K++E  + G     H+E
Sbjct: 198 QIPDSSHSSPILLEPPDIRNWYFSYVHESP------ETNECVGKETERGEDGL--VNHHE 249

Query: 201 FGTKGIC-LGKRQSTPKV-CDEET-------FGGKHKEENSSSRLEQSVISCSSK 338
              + +C  G+ ++T +V  DEE        F    ++E  +  L + +I  SSK
Sbjct: 250 AKGRNLCKFGQSRNTDEVIIDEEVGPNGFLKFDNSIRDELENQSLNKGIILLSSK 304


>ref|XP_004147260.1| PREDICTED: uncharacterized protein LOC101212491 [Cucumis sativus]
           gi|449517561|ref|XP_004165814.1| PREDICTED:
           uncharacterized protein LOC101226092 [Cucumis sativus]
          Length = 409

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/102 (39%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
 Frame = +3

Query: 33  SSCSASLLSEPPDIRNWFSSYVYESPALDTEDELKCFISKKSELEKVGFDTEEHNEFGTK 212
           S CS SLLSEPPDI NWFSSYVYESP L+   E     SKK+ L   G + EE  + G +
Sbjct: 112 SWCSQSLLSEPPDIGNWFSSYVYESPTLNPSQEFGYCESKKTGL---GHEIEETLDNGGE 168

Query: 213 GICL-----------GKRQSTPKVCDEETFGGKHKEENSSSR 305
           G+ L           G RQ       +  F  +  E++   +
Sbjct: 169 GVQLNLFEISNGDSTGNRQDNQPPSKQNLFSERTSEQDPKEK 210



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 34/83 (40%), Positives = 45/83 (54%)
 Frame = +3

Query: 15  EMKIPGSSCSASLLSEPPDIRNWFSSYVYESPALDTEDELKCFISKKSELEKVGFDTEEH 194
           + ++P SS   S  SEPPDI NWFSSY YESP LD+ D     +S++ E E VG D +  
Sbjct: 8   DSQVPHSSFLHSPSSEPPDIGNWFSSYEYESPELDSNDNFGDSVSREREFE-VGEDEQTV 66

Query: 195 NEFGTKGICLGKRQSTPKVCDEE 263
            E          R +  K+ +EE
Sbjct: 67  GEL---------RDNVTKIEEEE 80


Top