BLASTX nr result

ID: Coptis23_contig00017579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017579
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149525.1| PREDICTED: UPF0586 protein C9orf41 homolog [...   139   2e-31
ref|XP_002879368.1| hypothetical protein ARALYDRAFT_902264 [Arab...   132   4e-29
ref|NP_850185.1| N2227-like domain-containing protein [Arabidops...   130   1e-28
ref|XP_003543999.1| PREDICTED: UPF0586 protein C9orf41 homolog [...   119   2e-25
ref|XP_003556852.1| PREDICTED: uncharacterized protein LOC100791...   119   3e-25

>ref|XP_004149525.1| PREDICTED: UPF0586 protein C9orf41 homolog [Cucumis sativus]
          Length = 492

 Score =  139 bits (350), Expect = 2e-31
 Identities = 87/185 (47%), Positives = 105/185 (56%), Gaps = 30/185 (16%)
 Frame = +2

Query: 2   KCQQLRRCISVNSFFIQNMLEAFEPPLDMSQDIVIYEQEELEYVPKN--CFSGERN---- 163
           K ++LRRCIS NS+FI NML+AFEPPLDMSQD    +    ++   +  C  GERN    
Sbjct: 69  KFERLRRCISTNSYFIFNMLQAFEPPLDMSQDTDCCDGSYPDHAHDDQFCCRGERNANGN 128

Query: 164 -------FCSGQSASTSGRTCFSEDDQT---KGYKESQ--SSASNDVE-AVNNQAGLGS- 301
                   CSG+  STSGR C  E  Q    +G  +S   S+ + +VE  VN+   L   
Sbjct: 129 LCSRESNVCSGEPTSTSGRMCSLESKQICCPEGASDSPKASTINQEVENGVNHDQHLEEK 188

Query: 302 ----------ISESKGNVNLDPRDWLDPKFQLKVPLVDVDKVRCIIRNIVRDWASEGGKE 451
                      S+  GN      +WLDP  QL VPLVDVDKVRCIIRNIVRDWA EG KE
Sbjct: 189 EVTDKHSGHCASDCNGNDCSSSHEWLDPSLQLNVPLVDVDKVRCIIRNIVRDWAEEGQKE 248

Query: 452 RDQCY 466
           R+QCY
Sbjct: 249 REQCY 253


>ref|XP_002879368.1| hypothetical protein ARALYDRAFT_902264 [Arabidopsis lyrata subsp.
           lyrata] gi|297325207|gb|EFH55627.1| hypothetical protein
           ARALYDRAFT_902264 [Arabidopsis lyrata subsp. lyrata]
          Length = 508

 Score =  132 bits (331), Expect = 4e-29
 Identities = 76/173 (43%), Positives = 100/173 (57%), Gaps = 18/173 (10%)
 Frame = +2

Query: 2   KCQQLRRCISVNSFFIQNMLEAFEPPLDMSQDIVIYEQEELEYVPKNCFS-GERNFCSGQ 178
           K Q+LRRCIS NS+FI NML+AFEPP+D+SQ++   E   LE  P   ++  ER+  S Q
Sbjct: 99  KFQRLRRCISANSYFIFNMLQAFEPPIDLSQELDGCEDSNLECAPHERYTLDERHDSSCQ 158

Query: 179 SASTSGRTCFSEDDQTK------GYKESQSSASNDVEAVNNQAGL-----------GSIS 307
            A T+  T   E    +        +E Q   ++D  + ++ A             G ++
Sbjct: 159 PALTNSCTYKEESKHIREPITGVSIEELQRKEAHDHSSKDDSADARITNKTCECDGGQLN 218

Query: 308 ESKGNVNLDPRDWLDPKFQLKVPLVDVDKVRCIIRNIVRDWASEGGKERDQCY 466
              G+V+    DWLD   Q  VPLVDVDKVRCIIRNIVRDWA+EG +ERDQCY
Sbjct: 219 HDHGSVSFSSHDWLDSSLQTHVPLVDVDKVRCIIRNIVRDWAAEGQRERDQCY 271


>ref|NP_850185.1| N2227-like domain-containing protein [Arabidopsis thaliana]
           gi|20259498|gb|AAM13869.1| unknown protein [Arabidopsis
           thaliana] gi|22136766|gb|AAM91702.1| unknown protein
           [Arabidopsis thaliana] gi|330253550|gb|AEC08644.1|
           N2227-like domain-containing protein [Arabidopsis
           thaliana]
          Length = 504

 Score =  130 bits (326), Expect = 1e-28
 Identities = 75/173 (43%), Positives = 99/173 (57%), Gaps = 18/173 (10%)
 Frame = +2

Query: 2   KCQQLRRCISVNSFFIQNMLEAFEPPLDMSQDIVIYEQEELEYVPKNCFS-GERNFCSGQ 178
           K Q+LRRCIS NS+FI NML+AFEPP+D+SQ++   E   L+  P   ++  ER+  S Q
Sbjct: 94  KFQRLRRCISANSYFIFNMLQAFEPPIDLSQELDGCEDSNLDCAPHERYTLDERHDSSCQ 153

Query: 179 SASTSGRTCFSEDDQTK------GYKESQSSASNDVEAVNNQAGL-----------GSIS 307
            A T+  T   E    +        +E Q   ++D    ++ A             G ++
Sbjct: 154 PALTNSCTYKEESKHIRDPITGVSIEELQRKEAHDHSPKDDSADTRINDKTCDCHEGQLN 213

Query: 308 ESKGNVNLDPRDWLDPKFQLKVPLVDVDKVRCIIRNIVRDWASEGGKERDQCY 466
              G+V+    DWLD   Q  VPLVDVDKVRCIIRNIVRDWA+EG +ERDQCY
Sbjct: 214 HDHGSVSFSSHDWLDSSLQTHVPLVDVDKVRCIIRNIVRDWAAEGQRERDQCY 266


>ref|XP_003543999.1| PREDICTED: UPF0586 protein C9orf41 homolog [Glycine max]
          Length = 456

 Score =  119 bits (299), Expect = 2e-25
 Identities = 73/159 (45%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
 Frame = +2

Query: 2   KCQQLRRCISVNSFFIQNMLEAFEPPLDMSQDIVIYEQEELEYVPKNCFSGER-NFCSGQ 178
           K Q+LR CIS+N+ FI +ML+AFEPPLDMSQD    E    E   K+    E  + CS +
Sbjct: 65  KFQRLRWCISMNTHFIFSMLQAFEPPLDMSQDADFSEDPHPESAQKDHLVSEGISACSCE 124

Query: 179 SASTSGRTCFSEDDQTKGYKESQSSASNDVEAVNNQAGLGS-ISESKGNV--NLDPRDWL 349
           SA   G        +++    + + +   +     +   GS I++SKGNV      + WL
Sbjct: 125 SAPEVGI-------ESRHQSNTGNHSPRLIHTKETREYCGSPIADSKGNVPDTSSQQQWL 177

Query: 350 DPKFQLKVPLVDVDKVRCIIRNIVRDWASEGGKERDQCY 466
            P  +L VPLVD DKVRCIIRNIVRDWA+EG KERDQCY
Sbjct: 178 APSLKLNVPLVDADKVRCIIRNIVRDWAAEGKKERDQCY 216


>ref|XP_003556852.1| PREDICTED: uncharacterized protein LOC100791662 [Glycine max]
          Length = 627

 Score =  119 bits (297), Expect = 3e-25
 Identities = 79/187 (42%), Positives = 101/187 (54%), Gaps = 31/187 (16%)
 Frame = +2

Query: 2   KCQQLRRCISVNSFFIQNMLEAFEPPLDMSQDIVIYEQEELEYVPKNCFSGER-NFCSGQ 178
           K Q+LR CIS+N+ FI  ML+AFEPPLDMSQD+   E    E   K+    E  + CS +
Sbjct: 205 KFQRLRWCISMNTHFIFGMLQAFEPPLDMSQDVDFSEDPHPESTQKDHLVSEGISACSCE 264

Query: 179 SASTSGRTCFSEDDQTK----------GYKESQSSASNDVEAVNNQAGLGS--------- 301
           S     R   S  DQ +             +  S+   D+E+ + Q+  GS         
Sbjct: 265 SVPV--RITCSVSDQHRCVEGGNHTCISQAQMHSNEEVDIESCH-QSNTGSHSPSMIHPK 321

Query: 302 ---------ISESKGNVNL--DPRDWLDPKFQLKVPLVDVDKVRCIIRNIVRDWASEGGK 448
                    I++S GNV +    + WLDP  +L VPLVDVDKVRCIIRNIVRDWA+EG  
Sbjct: 322 ETSEYCGSPIADSNGNVPVTSSQQQWLDPSLKLNVPLVDVDKVRCIIRNIVRDWAAEGKN 381

Query: 449 ERDQCYT 469
           ERDQCY+
Sbjct: 382 ERDQCYS 388


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