BLASTX nr result

ID: Coptis23_contig00017571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017571
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC90764.1| nucleotide-binding site leucine-rich repeat prote...    91   8e-17
gb|AFC90271.1| nucleotide-binding site leucine-rich repeat prote...    89   4e-16
gb|AFC90695.1| nucleotide-binding site leucine-rich repeat prote...    89   5e-16
gb|AFC90715.1| nucleotide-binding site leucine-rich repeat prote...    88   6e-16
gb|AFC90783.1| nucleotide-binding site leucine-rich repeat prote...    88   8e-16

>gb|AFC90764.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 268

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 43/96 (44%), Positives = 60/96 (62%)
 Frame = -3

Query: 318 ALRECSSFKKWENALMALRSSKTKIEDPEEVIYKLLRFGYSRLKNHMVQQCFLYCAFFPE 139
           +LR     ++W NAL  L SS     D E  +++ L+F YSRL N ++Q CFLYC+ +PE
Sbjct: 172 SLRGLKGIREWRNALNELISSTKDASDDESEVFERLKFSYSRLGNKVLQDCFLYCSLYPE 231

Query: 138 DYLFEPSELIRYWMAEGLINEVGDMVSEIYEGFKIL 31
           DY     ELI YW+AEGLI E+  + ++I +G  IL
Sbjct: 232 DYRIPVKELIEYWIAEGLIVEMNSVEAKINKGHTIL 267


>gb|AFC90271.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron kanehirai]
          Length = 298

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/105 (39%), Positives = 66/105 (62%)
 Frame = -3

Query: 318 ALRECSSFKKWENALMALRSSKTKIEDPEEVIYKLLRFGYSRLKNHMVQQCFLYCAFFPE 139
           +LR     + W NAL  L SS  ++ D E  +++ L+F YSRL + ++Q CFLYC+ +PE
Sbjct: 175 SLRGLKGIRGWRNALNELISSTKEVNDGEGKVFERLKFSYSRLGDELLQNCFLYCSLYPE 234

Query: 138 DYLFEPSELIRYWMAEGLINEVGDMVSEIYEGFKILKELKDAGLL 4
           D+     ELI YW+AEGLI ++  + +++ +G  IL +L  + +L
Sbjct: 235 DHEIPVEELIEYWIAEGLIGDMDSVEAQLDKGHAILGKLTSSCIL 279


>gb|AFC90695.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/96 (42%), Positives = 60/96 (62%)
 Frame = -3

Query: 318 ALRECSSFKKWENALMALRSSKTKIEDPEEVIYKLLRFGYSRLKNHMVQQCFLYCAFFPE 139
           +LR     ++W NAL  L +S     D E  +++ L+F YSRL N ++Q CFLYCA +PE
Sbjct: 171 SLRGLKRIREWRNALNELINSTKDASDDESEVFERLKFSYSRLGNKVLQDCFLYCALYPE 230

Query: 138 DYLFEPSELIRYWMAEGLINEVGDMVSEIYEGFKIL 31
           D+     ELI YW+AE LI ++G + ++I +G  IL
Sbjct: 231 DHKIPVDELIEYWIAEELIGDMGSVEAQINKGHAIL 266


>gb|AFC90715.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/96 (43%), Positives = 60/96 (62%)
 Frame = -3

Query: 318 ALRECSSFKKWENALMALRSSKTKIEDPEEVIYKLLRFGYSRLKNHMVQQCFLYCAFFPE 139
           +LR     ++W NAL  L SS     D E  +++ L+F YSRL N ++Q CFLYC+ +PE
Sbjct: 171 SLRGLKGIREWRNALNELISSAKDASDDESEVFERLKFSYSRLGNKVLQDCFLYCSLYPE 230

Query: 138 DYLFEPSELIRYWMAEGLINEVGDMVSEIYEGFKIL 31
           D+    +ELI YW+AEGLI E+  + + I +G  IL
Sbjct: 231 DHDIPVNELIEYWIAEGLIAEMNSIEAMINKGHAIL 266


>gb|AFC90783.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 268

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/96 (42%), Positives = 61/96 (63%)
 Frame = -3

Query: 318 ALRECSSFKKWENALMALRSSKTKIEDPEEVIYKLLRFGYSRLKNHMVQQCFLYCAFFPE 139
           +LR     ++W NAL  L SS  +  + E  +++ L+F YSRL N ++Q CFLYC+ +PE
Sbjct: 172 SLRGLEGIREWRNALNELNSSTKEDTNAENEVFEQLKFSYSRLGNEVLQDCFLYCSLYPE 231

Query: 138 DYLFEPSELIRYWMAEGLINEVGDMVSEIYEGFKIL 31
           D+     ELI YW+AEGLI E+  + ++I +G  IL
Sbjct: 232 DHDIHLEELIEYWIAEGLIAEMDSIEAKINKGHAIL 267


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