BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017566
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003567997.1| PREDICTED: flap endonuclease 1-A-like [Brach...    75   7e-12
gb|AFW78922.1| flap endonuclease 1a [Zea mays]                         74   1e-11
ref|XP_003555770.1| PREDICTED: flap endonuclease 1-like [Glycine...    74   1e-11
gb|AEL98739.1| endonuclease, partial [Silene latifolia] gi|34317...    74   1e-11
ref|NP_001242313.1| flap endonuclease 1 [Glycine max] gi|3173761...    74   1e-11

>ref|XP_003567997.1| PREDICTED: flap endonuclease 1-A-like [Brachypodium distachyon]
          Length = 380

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +2

Query: 206 QGMFSRTVRLLEDGLKPVYVFDGKPPDMKKQELAKWYVKR 325
           QGMF+RT+RLLE G+KPVYVFDGKPPDMKKQELAK Y KR
Sbjct: 66  QGMFNRTIRLLEAGIKPVYVFDGKPPDMKKQELAKRYAKR 105


>gb|AFW78922.1| flap endonuclease 1a [Zea mays]
          Length = 523

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +2

Query: 206 QGMFSRTVRLLEDGLKPVYVFDGKPPDMKKQELAKWYVKR 325
           QGMF+RT+RLLE G+KPVYVFDGKPPDMKKQELAK Y KR
Sbjct: 210 QGMFNRTIRLLEAGIKPVYVFDGKPPDMKKQELAKRYSKR 249


>ref|XP_003555770.1| PREDICTED: flap endonuclease 1-like [Glycine max]
          Length = 382

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +2

Query: 206 QGMFSRTVRLLEDGLKPVYVFDGKPPDMKKQELAKWYVKR 325
           QGMFSRT+RLLE G+KPVYVFDGKPPD+KKQELAK Y KR
Sbjct: 66  QGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKR 105


>gb|AEL98739.1| endonuclease, partial [Silene latifolia]
           gi|343172072|gb|AEL98740.1| endonuclease, partial
           [Silene latifolia]
          Length = 325

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +2

Query: 206 QGMFSRTVRLLEDGLKPVYVFDGKPPDMKKQELAKWYVKR 325
           QGMFSRT+RLLE G+KPVYVFDGKPPD+KKQELAK Y KR
Sbjct: 66  QGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKR 105


>ref|NP_001242313.1| flap endonuclease 1 [Glycine max]
           gi|317376195|sp|C6TEX6.1|FEN1_SOYBN RecName: Full=Flap
           endonuclease 1; Short=FEN-1; AltName: Full=Flap
           structure-specific endonuclease 1
           gi|255640175|gb|ACU20378.1| unknown [Glycine max]
          Length = 382

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +2

Query: 206 QGMFSRTVRLLEDGLKPVYVFDGKPPDMKKQELAKWYVKR 325
           QGMFSRT+RLLE G+KPVYVFDGKPPD+KKQELAK Y KR
Sbjct: 66  QGMFSRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKR 105