BLASTX nr result

ID: Coptis23_contig00017555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017555
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283815.1| PREDICTED: uncharacterized protein LOC100266...   150   3e-34
ref|XP_002514237.1| conserved hypothetical protein [Ricinus comm...   145   1e-32
ref|XP_002324447.1| predicted protein [Populus trichocarpa] gi|2...   131   2e-28
gb|AFK43451.1| unknown [Lotus japonicus]                              130   4e-28
ref|XP_002283976.1| PREDICTED: uncharacterized protein LOC100248...   124   2e-26

>ref|XP_002283815.1| PREDICTED: uncharacterized protein LOC100266427 [Vitis vinifera]
          Length = 201

 Score =  150 bits (380), Expect = 3e-34
 Identities = 82/164 (50%), Positives = 114/164 (69%), Gaps = 8/164 (4%)
 Frame = +1

Query: 4   HLMMKRGKTAKKAIENIVLNNNSTFGCIPQDPHLAFISPKEYEFSCSNSPAFPFH----V 171
           HLM KRGK A KA+ N++ +++S+  C   D  L+F+SPKEYEFSCSNSPA+PFH    +
Sbjct: 39  HLMFKRGKIAGKALGNLMFHHHSSLSCRSNDA-LSFVSPKEYEFSCSNSPAYPFHYPFQL 97

Query: 172 STKRRHR---RHNNGVTA-GVWKRLEMLNNEAREASPLVLYPKFGKSPLVRQLRITDSPF 339
           + ++RH    R+++  T   V + LEMLNNE  EASPL L P FG+SP+VRQLR+TDSPF
Sbjct: 98  NKRKRHHHSTRYDDVTTVCAVQRVLEMLNNEMVEASPLTL-PGFGRSPMVRQLRVTDSPF 156

Query: 340 SVGEGEANSHVDEEAGEFIERFYAQLRHQKQMAAIEEWNYSMWA 471
            + + + +  VD+ A EFI +F+  L+ QK M+A+E    +MWA
Sbjct: 157 PIKDTDEDPQVDKAAEEFIRKFHKDLKLQKMMSALESPYNNMWA 200


>ref|XP_002514237.1| conserved hypothetical protein [Ricinus communis]
           gi|223546693|gb|EEF48191.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 206

 Score =  145 bits (366), Expect = 1e-32
 Identities = 95/172 (55%), Positives = 116/172 (67%), Gaps = 15/172 (8%)
 Frame = +1

Query: 4   HLMMKRG-KTAKKAIENIVLNNN-STFGCIPQDPHLAFISPKEYEFSCSNSPA--FPFHV 171
           HLM+KRG K A KAI N+V ++N S+F C   D  L FISP+EYEFSCSNSPA  +PF  
Sbjct: 39  HLMLKRGNKLAGKAIGNLVYHHNHSSFSCRSNDA-LNFISPREYEFSCSNSPATFYPFSA 97

Query: 172 STKRRHRRH--------NNGVT--AGVWKRLEMLNNEAR-EASPLVLYPKFGKSPLVRQL 318
             KR+H  H         N VT  A V K LEMLNNE + EASP+VL P FGKSP+VRQL
Sbjct: 98  H-KRKHHHHLHFTKSYKYNDVTTVAAVQKMLEMLNNEVQVEASPMVL-PGFGKSPMVRQL 155

Query: 319 RITDSPFSVGEGEANSHVDEEAGEFIERFYAQLRHQKQMAAIEEWNYSMWAR 474
           RITDSPF + + E +S VD+ A EFI++FY  L+ QK +AA+E   + MW R
Sbjct: 156 RITDSPFPL-KDEGDSQVDKAAEEFIKKFYKDLKLQKTVAALESPYHGMWGR 206


>ref|XP_002324447.1| predicted protein [Populus trichocarpa] gi|222865881|gb|EEF03012.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  131 bits (329), Expect = 2e-28
 Identities = 92/176 (52%), Positives = 117/176 (66%), Gaps = 19/176 (10%)
 Frame = +1

Query: 4   HLMMKRG-KTAKKAIENIVLNN--NSTFGCIPQDPHLAFISPKEYEFSCSNSPAF--PFH 168
           HLM+KRG K A+KAI N++ +N  +S+F C   D  L+FISP+EYEFSCSNSPA   PF+
Sbjct: 38  HLMLKRGNKLAEKAICNLMFHNYHHSSFSCRSNDA-LSFISPREYEFSCSNSPANFNPFY 96

Query: 169 VSTKRRHR--------RHNNGVTAG-VWKRLEMLNN----EAREASPLVLYPKFGKSPLV 309
              KR+H+        ++++  TA  V K LEMLNN     A EASPL L P FGKSP+V
Sbjct: 97  TH-KRKHQLNLFAKSYKYDDVTTAAAVQKMLEMLNNPEVASAVEASPLSL-PGFGKSPMV 154

Query: 310 RQLRITDSPFSVGEGEANSHVDEEAGEFIERFYAQLRHQKQMAAIEEWNYS-MWAR 474
           RQLRITDSPF + + E +S VD+ A EFI++FY  L+ QK  AA  E  Y+ MW R
Sbjct: 155 RQLRITDSPFPL-KDEGDSQVDKAAEEFIKKFYKDLKLQKTAAAALESPYNGMWGR 209


>gb|AFK43451.1| unknown [Lotus japonicus]
          Length = 209

 Score =  130 bits (327), Expect = 4e-28
 Identities = 76/166 (45%), Positives = 98/166 (59%), Gaps = 16/166 (9%)
 Frame = +1

Query: 1   HHLMMKRGKTAKKAIENIVLNNN--STFGCIPQDPHLAFISPKEYEFSCSNSPAFPFHVS 174
           HHLM+KRGK A KAI N ++ ++  +   C   + HL+  SP+EYEFSCSNSP F    +
Sbjct: 39  HHLMLKRGKLAGKAIANTLMFHHQYAALACRSHNTHLSVFSPREYEFSCSNSPVF--QPT 96

Query: 175 TKRRHRRHNN-----------GVTAGVWKRLEMLNNEARE---ASPLVLYPKFGKSPLVR 312
            +RRH  H+               + V K LEMLNN+  E   +SPLV  P FGKSP+ R
Sbjct: 97  KRRRHHHHHRYSKPSSQYDDFSTYSAVQKVLEMLNNDKVEVDSSSPLVTLPGFGKSPVCR 156

Query: 313 QLRITDSPFSVGEGEANSHVDEEAGEFIERFYAQLRHQKQMAAIEE 450
           QLR+TDSPF + +   +S VD E  EFI+RFY  L  QK+  A  E
Sbjct: 157 QLRVTDSPFPLKDESGDSQVDVEVEEFIKRFYKDLNLQKRSMAFFE 202


>ref|XP_002283976.1| PREDICTED: uncharacterized protein LOC100248099 [Vitis vinifera]
          Length = 208

 Score =  124 bits (312), Expect = 2e-26
 Identities = 75/161 (46%), Positives = 101/161 (62%), Gaps = 19/161 (11%)
 Frame = +1

Query: 4   HLMMKRGKTAKKAIENIVLNNNSTFGCIPQ-DPHLAFISPKEYEFSCSNSPAFPFHVS-- 174
           ++MMKRGK A KAI N++ +++S+       D H++F +P+EYEFSCSNSPA+P+H    
Sbjct: 45  NMMMKRGKIAGKAIGNLMFHHHSSSAARRSADGHISFAAPREYEFSCSNSPAYPYHFPFN 104

Query: 175 -TKRRHRRHN--------------NGVTAGVWKR-LEMLNNEAREASPLVLYPKFGKSPL 306
             KR+H  HN              +  T    K  LEMLN+E   ASP +  P FG+SP+
Sbjct: 105 FNKRKHNHHNIFSCVFQTPPTSDDDFTTVNAVKAVLEMLNSEV--ASPAL--PGFGRSPM 160

Query: 307 VRQLRITDSPFSVGEGEANSHVDEEAGEFIERFYAQLRHQK 429
           VRQLRITDSPF + + + +S VD+ A EFIERFY  L+ QK
Sbjct: 161 VRQLRITDSPFPLKDIDEDSEVDKAAEEFIERFYNDLKKQK 201


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