BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017551
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containi...   167   6e-40
ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   165   3e-39
ref|XP_003550790.1| PREDICTED: pentatricopeptide repeat-containi...   165   3e-39
ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago t...   165   3e-39
emb|CBI28530.3| unnamed protein product [Vitis vinifera]              165   3e-39

>ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Cucumis sativus]
           gi|449477571|ref|XP_004155060.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Cucumis sativus]
          Length = 487

 Score =  167 bits (424), Expect = 6e-40
 Identities = 73/106 (68%), Positives = 94/106 (88%)
 Frame = +1

Query: 37  SGRFGKGNMIVDEMIKEGVTPEPRFYHDLLGVLCGVERVGHALELFERMKKSGIGDYGSV 216
           +GRFGKG  IVDEMI+EG+TP+ +FY+DL+G+LCGVER  +ALELFE+MK+S +G YG V
Sbjct: 346 TGRFGKGREIVDEMIEEGLTPDRKFYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPV 405

Query: 217 YDLLIPKLCRGGEFEKGRLLWDEAMKMGITLQCSSDVLDPTVTEVF 354
           YD+LIPKLCRGGEFE GR LW+EAM MG++L CSS++LDP++T+VF
Sbjct: 406 YDVLIPKLCRGGEFEMGRQLWEEAMAMGVSLNCSSEILDPSITKVF 451


>ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61370, mitochondrial-like [Vitis vinifera]
          Length = 505

 Score =  165 bits (418), Expect = 3e-39
 Identities = 73/106 (68%), Positives = 93/106 (87%)
 Frame = +1

Query: 37  SGRFGKGNMIVDEMIKEGVTPEPRFYHDLLGVLCGVERVGHALELFERMKKSGIGDYGSV 216
           +GRFGKGN IVDEMI+EG+ P+ +FY+DL+GVLCGVERV +ALE+FERMK+S +G YG V
Sbjct: 336 TGRFGKGNQIVDEMIEEGLVPDRKFYYDLIGVLCGVERVNYALEMFERMKRSSLGGYGPV 395

Query: 217 YDLLIPKLCRGGEFEKGRLLWDEAMKMGITLQCSSDVLDPTVTEVF 354
           YD+LIPKLCR G+F KGR LWDEA ++G+ L CSS+VLDP++T+VF
Sbjct: 396 YDVLIPKLCRSGDFGKGRELWDEATRVGVLLHCSSEVLDPSITKVF 441


>ref|XP_003550790.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Glycine max]
          Length = 451

 Score =  165 bits (418), Expect = 3e-39
 Identities = 75/106 (70%), Positives = 91/106 (85%)
 Frame = +1

Query: 37  SGRFGKGNMIVDEMIKEGVTPEPRFYHDLLGVLCGVERVGHALELFERMKKSGIGDYGSV 216
           SGRFGKG  +VD+MI +G+ P  +FY+ L+G+LCGVERV +ALELFE+MKKS +G YG V
Sbjct: 303 SGRFGKGKEMVDQMIGKGLVPNHKFYYSLIGILCGVERVNYALELFEKMKKSSMGGYGPV 362

Query: 217 YDLLIPKLCRGGEFEKGRLLWDEAMKMGITLQCSSDVLDPTVTEVF 354
           YD+LIPKLCRGG+FEKGR LWDEA  MGITLQCS DVLDP++TEV+
Sbjct: 363 YDVLIPKLCRGGDFEKGRELWDEASGMGITLQCSEDVLDPSITEVY 408


>ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355497182|gb|AES78385.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 563

 Score =  165 bits (418), Expect = 3e-39
 Identities = 74/106 (69%), Positives = 90/106 (84%)
 Frame = +1

Query: 37  SGRFGKGNMIVDEMIKEGVTPEPRFYHDLLGVLCGVERVGHALELFERMKKSGIGDYGSV 216
           SGRFGKG  IVD+MI++G+ P  +FY+ L+G+LCGVERV HAL+LFE+MK S +G YG V
Sbjct: 410 SGRFGKGKEIVDQMIEKGLVPNHKFYYSLIGILCGVERVNHALDLFEKMKGSSVGGYGPV 469

Query: 217 YDLLIPKLCRGGEFEKGRLLWDEAMKMGITLQCSSDVLDPTVTEVF 354
           YD+LIPKLCRGG+FEKGR LWDE   MGITLQCS DVLDP++TEV+
Sbjct: 470 YDVLIPKLCRGGDFEKGRELWDEGTYMGITLQCSKDVLDPSITEVY 515


>emb|CBI28530.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  165 bits (418), Expect = 3e-39
 Identities = 73/106 (68%), Positives = 93/106 (87%)
 Frame = +1

Query: 37  SGRFGKGNMIVDEMIKEGVTPEPRFYHDLLGVLCGVERVGHALELFERMKKSGIGDYGSV 216
           +GRFGKGN IVDEMI+EG+ P+ +FY+DL+GVLCGVERV +ALE+FERMK+S +G YG V
Sbjct: 305 TGRFGKGNQIVDEMIEEGLVPDRKFYYDLIGVLCGVERVNYALEMFERMKRSSLGGYGPV 364

Query: 217 YDLLIPKLCRGGEFEKGRLLWDEAMKMGITLQCSSDVLDPTVTEVF 354
           YD+LIPKLCR G+F KGR LWDEA ++G+ L CSS+VLDP++T+VF
Sbjct: 365 YDVLIPKLCRSGDFGKGRELWDEATRVGVLLHCSSEVLDPSITKVF 410