BLASTX nr result

ID: Coptis23_contig00017540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017540
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135068.1| PREDICTED: fruit protein pKIWI502-like [Cucu...   198   4e-49
ref|XP_002311484.1| predicted protein [Populus trichocarpa] gi|2...   197   7e-49
ref|XP_002283966.1| PREDICTED: fruit protein pKIWI502 [Vitis vin...   196   1e-48
ref|XP_002315901.1| predicted protein [Populus trichocarpa] gi|2...   195   4e-48
emb|CAN69513.1| hypothetical protein VITISV_018719 [Vitis vinifera]   193   1e-47

>ref|XP_004135068.1| PREDICTED: fruit protein pKIWI502-like [Cucumis sativus]
           gi|449506357|ref|XP_004162727.1| PREDICTED: fruit
           protein pKIWI502-like [Cucumis sativus]
          Length = 304

 Score =  198 bits (503), Expect = 4e-49
 Identities = 91/133 (68%), Positives = 115/133 (86%)
 Frame = -3

Query: 399 DTTVWTQSPITTIQQAADSLFHIKINVSDSPDLISTHTRPGQYLQLRLPDTDKPSFLAIA 220
           DT  WTQ+P+  ++ AA+SLFH+ I+VSD+PDL ++HTR GQYLQLR+PD +KP+FLAIA
Sbjct: 63  DTAAWTQAPLAEVEPAAESLFHVSIDVSDAPDLAASHTRAGQYLQLRVPDVEKPTFLAIA 122

Query: 219 SPPLITSSIGVFEFLVKSVPGSTAQLVCQLKEGDVVELSHVMGKGFDIDRIQPAQDFPTV 40
           SPPL+ S+ GVF+FLVKSV GS A+L+C LK+GDVV+LS VMGKGFD+D+I P QDFP+V
Sbjct: 123 SPPLLASAEGVFQFLVKSVEGSIAELLCGLKKGDVVQLSQVMGKGFDVDQIAPPQDFPSV 182

Query: 39  LIFATGSGVSPIR 1
            IFATGSG+SPIR
Sbjct: 183 FIFATGSGISPIR 195


>ref|XP_002311484.1| predicted protein [Populus trichocarpa] gi|222851304|gb|EEE88851.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  197 bits (501), Expect = 7e-49
 Identities = 93/133 (69%), Positives = 116/133 (87%)
 Frame = -3

Query: 399 DTTVWTQSPITTIQQAADSLFHIKINVSDSPDLISTHTRPGQYLQLRLPDTDKPSFLAIA 220
           DTTVWTQ+P++ I+ AA+SLFH++I+V DSPDL ++HTR GQYLQLR+PD +KPSFLAIA
Sbjct: 14  DTTVWTQAPLSGIEPAAESLFHVRIDVLDSPDLAASHTRAGQYLQLRVPDVEKPSFLAIA 73

Query: 219 SPPLITSSIGVFEFLVKSVPGSTAQLVCQLKEGDVVELSHVMGKGFDIDRIQPAQDFPTV 40
           SPP   +S G F+FLVKSV GSTA+L+C LK GDVVELS  MG+GFDI++I+PA+ +PTV
Sbjct: 74  SPPSDAASKGAFDFLVKSVAGSTAELLCGLKRGDVVELSQAMGRGFDIEQIEPAEKYPTV 133

Query: 39  LIFATGSGVSPIR 1
           LIFATGSG+SPIR
Sbjct: 134 LIFATGSGISPIR 146


>ref|XP_002283966.1| PREDICTED: fruit protein pKIWI502 [Vitis vinifera]
          Length = 290

 Score =  196 bits (499), Expect = 1e-48
 Identities = 93/133 (69%), Positives = 115/133 (86%)
 Frame = -3

Query: 399 DTTVWTQSPITTIQQAADSLFHIKINVSDSPDLISTHTRPGQYLQLRLPDTDKPSFLAIA 220
           DTTVWT +P++++  AADSLFH+ I+VSDSPD++S+H+  GQYLQLRLPD  KPSFLAIA
Sbjct: 49  DTTVWTPAPLSSVHPAADSLFHVTIDVSDSPDILSSHSSAGQYLQLRLPDFAKPSFLAIA 108

Query: 219 SPPLITSSIGVFEFLVKSVPGSTAQLVCQLKEGDVVELSHVMGKGFDIDRIQPAQDFPTV 40
           SPP + ++ G FEFLVKSVPGSTA+L+C LK+GDVVEL+  MG+GFDIDRI P +D+ TV
Sbjct: 109 SPPSLAAARGEFEFLVKSVPGSTAELLCGLKKGDVVELTPAMGRGFDIDRISPPEDYHTV 168

Query: 39  LIFATGSGVSPIR 1
           LIFATGSG+SPIR
Sbjct: 169 LIFATGSGISPIR 181


>ref|XP_002315901.1| predicted protein [Populus trichocarpa] gi|222864941|gb|EEF02072.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  195 bits (495), Expect = 4e-48
 Identities = 91/133 (68%), Positives = 114/133 (85%)
 Frame = -3

Query: 399 DTTVWTQSPITTIQQAADSLFHIKINVSDSPDLISTHTRPGQYLQLRLPDTDKPSFLAIA 220
           DTT+WTQ+P++ I+ AA+SLFH+ I+VSD PDL ++HTR GQYLQLR+PD +KPSFLAIA
Sbjct: 14  DTTIWTQAPLSEIEPAAESLFHVSIDVSDYPDLAASHTRAGQYLQLRVPDVEKPSFLAIA 73

Query: 219 SPPLITSSIGVFEFLVKSVPGSTAQLVCQLKEGDVVELSHVMGKGFDIDRIQPAQDFPTV 40
           SPP   +  G FEFLVKSV GSTA+L+C LK+GDVVELS   G+GF+ID+I+PA+ +PTV
Sbjct: 74  SPPSYAAEKGAFEFLVKSVAGSTAELLCGLKKGDVVELSQATGRGFEIDQIEPAEKYPTV 133

Query: 39  LIFATGSGVSPIR 1
           LIFATGSG+SPIR
Sbjct: 134 LIFATGSGISPIR 146


>emb|CAN69513.1| hypothetical protein VITISV_018719 [Vitis vinifera]
          Length = 290

 Score =  193 bits (491), Expect = 1e-47
 Identities = 92/133 (69%), Positives = 114/133 (85%)
 Frame = -3

Query: 399 DTTVWTQSPITTIQQAADSLFHIKINVSDSPDLISTHTRPGQYLQLRLPDTDKPSFLAIA 220
           DTTVWT +P++++  AADSLFH+ I+VSDSPD++S+H+  GQYLQLRLPD  KPSFLAIA
Sbjct: 49  DTTVWTPAPLSSVHPAADSLFHVTIDVSDSPDILSSHSSAGQYLQLRLPDFAKPSFLAIA 108

Query: 219 SPPLITSSIGVFEFLVKSVPGSTAQLVCQLKEGDVVELSHVMGKGFDIDRIQPAQDFPTV 40
           SP  + ++ G FEFLVKSVPGSTA+L+C LK+GDVVEL+  MG+GFDIDRI P +D+ TV
Sbjct: 109 SPXSLAAARGEFEFLVKSVPGSTAELLCGLKKGDVVELTPAMGRGFDIDRISPPEDYHTV 168

Query: 39  LIFATGSGVSPIR 1
           LIFATGSG+SPIR
Sbjct: 169 LIFATGSGISPIR 181


Top