BLASTX nr result

ID: Coptis23_contig00017530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017530
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002335943.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002335943.1| predicted protein [Populus trichocarpa] gi|222836494|gb|EEE74901.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = +1

Query: 16  CLVTTGLTDLKFSCFFYTWSNNAEGPNKKMSKIDRVLTNTAWNTHF-RTEAIFAPPGISD 192
           C+    + DL++S   YTWSN     N  M K+DRVL N  WN +F  +EA F P G+SD
Sbjct: 226 CIREAKVDDLRYSGMHYTWSNQCP-ENLIMRKLDRVLVNEKWNLNFPLSEARFLPSGMSD 284

Query: 193 HS 198
           HS
Sbjct: 285 HS 286


Top