BLASTX nr result

ID: Coptis23_contig00017521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017521
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274667.1| PREDICTED: uncharacterized protein LOC100254...   207   2e-51
ref|XP_004139947.1| PREDICTED: uncharacterized protein LOC101205...   204   1e-50
ref|XP_004154547.1| PREDICTED: uncharacterized LOC101205427 [Cuc...   203   2e-50
emb|CBI21871.3| unnamed protein product [Vitis vinifera]              198   1e-48
ref|XP_003540925.1| PREDICTED: unconventional prefoldin RPB5 int...   195   7e-48

>ref|XP_002274667.1| PREDICTED: uncharacterized protein LOC100254110 [Vitis vinifera]
          Length = 340

 Score =  207 bits (526), Expect = 2e-51
 Identities = 108/152 (71%), Positives = 118/152 (77%)
 Frame = -2

Query: 456 MEEGVKGTVTSLASLFPXXXXXXXXXXXXXXXXXKQQELDQLHNFIADNNNLVKLVKKLP 277
           M+E VKGTVT LASLFP                 +Q ELD+L  FIADN  LV LV++LP
Sbjct: 1   MQEPVKGTVTPLASLFPPEEAQKASKRVQDALADRQSELDRLQGFIADNTALVNLVQRLP 60

Query: 276 DELFHDVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVDILQRRGKALDFQVD 97
           DEL HD+MVPFGKAAFFPGRL+HTNEFLVLLGEGYYAERTSKQTV+IL RRGKAL+ QVD
Sbjct: 61  DELHHDIMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILDRRGKALESQVD 120

Query: 96  SLKAVMLDLKTEASFFGTTAAEAAEGLVEIRE 1
           SLKA+M DLK E SFF  TAAEA EGLVEIRE
Sbjct: 121 SLKAMMKDLKAEVSFFDATAAEAVEGLVEIRE 152


>ref|XP_004139947.1| PREDICTED: uncharacterized protein LOC101205427 [Cucumis sativus]
          Length = 375

 Score =  204 bits (520), Expect = 1e-50
 Identities = 109/153 (71%), Positives = 123/153 (80%), Gaps = 1/153 (0%)
 Frame = -2

Query: 456 MEEG-VKGTVTSLASLFPXXXXXXXXXXXXXXXXXKQQELDQLHNFIADNNNLVKLVKKL 280
           ME G VKGTVTSLASLFP                 KQ+EL+QL  FI DN+NL+KLV+KL
Sbjct: 1   MESGRVKGTVTSLASLFPAQDARKAASRVQDAISEKQRELEQLRGFITDNDNLIKLVQKL 60

Query: 279 PDELFHDVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVDILQRRGKALDFQV 100
           P+EL H+VMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQT +IL+RRGKALD QV
Sbjct: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTAEILKRRGKALDSQV 120

Query: 99  DSLKAVMLDLKTEASFFGTTAAEAAEGLVEIRE 1
           DSLKA+M +LK EASFF  TA+EA +GLVEI+E
Sbjct: 121 DSLKAMMDNLKAEASFFDATASEAEDGLVEIKE 153


>ref|XP_004154547.1| PREDICTED: uncharacterized LOC101205427 [Cucumis sativus]
          Length = 375

 Score =  203 bits (517), Expect = 2e-50
 Identities = 108/153 (70%), Positives = 123/153 (80%), Gaps = 1/153 (0%)
 Frame = -2

Query: 456 MEEG-VKGTVTSLASLFPXXXXXXXXXXXXXXXXXKQQELDQLHNFIADNNNLVKLVKKL 280
           ME G VKGTVTSL+SLFP                 KQ+EL+QL  FI DN+NL+KLV+KL
Sbjct: 1   MESGRVKGTVTSLSSLFPAQDARKAASRVQDAISEKQRELEQLRGFITDNDNLIKLVQKL 60

Query: 279 PDELFHDVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVDILQRRGKALDFQV 100
           P+EL H+VMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQT +IL+RRGKALD QV
Sbjct: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTAEILKRRGKALDSQV 120

Query: 99  DSLKAVMLDLKTEASFFGTTAAEAAEGLVEIRE 1
           DSLKA+M +LK EASFF  TA+EA +GLVEI+E
Sbjct: 121 DSLKAMMDNLKAEASFFDATASEAEDGLVEIKE 153


>emb|CBI21871.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  198 bits (503), Expect = 1e-48
 Identities = 108/164 (65%), Positives = 118/164 (71%), Gaps = 12/164 (7%)
 Frame = -2

Query: 456 MEEGVKGTVTSLASLFPXXXXXXXXXXXXXXXXXKQQELDQLHNFIADNNNLVKLVKKLP 277
           M+E VKGTVT LASLFP                 +Q ELD+L  FIADN  LV LV++LP
Sbjct: 1   MQEPVKGTVTPLASLFPPEEAQKASKRVQDALADRQSELDRLQGFIADNTALVNLVQRLP 60

Query: 276 DELFHDVM------------VPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVDIL 133
           DEL HD+M            VPFGKAAFFPGRL+HTNEFLVLLGEGYYAERTSKQTV+IL
Sbjct: 61  DELHHDIMARKNPPQPNQTVVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEIL 120

Query: 132 QRRGKALDFQVDSLKAVMLDLKTEASFFGTTAAEAAEGLVEIRE 1
            RRGKAL+ QVDSLKA+M DLK E SFF  TAAEA EGLVEIRE
Sbjct: 121 DRRGKALESQVDSLKAMMKDLKAEVSFFDATAAEAVEGLVEIRE 164


>ref|XP_003540925.1| PREDICTED: unconventional prefoldin RPB5 interactor-like [Glycine
           max]
          Length = 374

 Score =  195 bits (496), Expect = 7e-48
 Identities = 102/151 (67%), Positives = 116/151 (76%)
 Frame = -2

Query: 453 EEGVKGTVTSLASLFPXXXXXXXXXXXXXXXXXKQQELDQLHNFIADNNNLVKLVKKLPD 274
           E   KG+VTSLASLFP                 KQ ELD+L  F  DNN+L+ LV KLP+
Sbjct: 3   ESTKKGSVTSLASLFPVEEAQRAAKRVEDTIADKQSELDRLRGFATDNNSLINLVHKLPE 62

Query: 273 ELFHDVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVDILQRRGKALDFQVDS 94
           +L HD+MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTV+ILQRRGK+LD QVDS
Sbjct: 63  QLSHDIMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILQRRGKSLDSQVDS 122

Query: 93  LKAVMLDLKTEASFFGTTAAEAAEGLVEIRE 1
           L+A + DL+ EASFF  TA++ AEGLVEIRE
Sbjct: 123 LEANIKDLEAEASFFNATASQVAEGLVEIRE 153


Top