BLASTX nr result

ID: Coptis23_contig00017496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017496
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523128.1| PREDICTED: kelch domain-containing protein 4...   115   5e-24
ref|XP_003528120.1| PREDICTED: kelch domain-containing protein 4...   113   1e-23
dbj|BAB09450.1| unnamed protein product [Arabidopsis thaliana]        111   5e-23
ref|NP_568723.1| kelch repeat-containing protein [Arabidopsis th...   111   5e-23
ref|XP_004172697.1| PREDICTED: LOW QUALITY PROTEIN: kelch domain...   111   7e-23

>ref|XP_003523128.1| PREDICTED: kelch domain-containing protein 4-like [Glycine max]
          Length = 661

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/81 (66%), Positives = 60/81 (74%)
 Frame = +2

Query: 149 DDIDTILMNIQXXXXXXXXXXXXXXXXXPSPRSNCSMNINPLKETELIFYGGEFYNGNKT 328
           DDID IL++IQ                 PSPRSNCS+ +NPLKETELI YGGEFYNGNKT
Sbjct: 38  DDIDAILLSIQKEEAKKKEVHVDDNVPAPSPRSNCSLTVNPLKETELILYGGEFYNGNKT 97

Query: 329 FVYGDLYIYDVEKLEWKLITS 391
           FVYGDLY YDVEKLEWKL++S
Sbjct: 98  FVYGDLYRYDVEKLEWKLVSS 118


>ref|XP_003528120.1| PREDICTED: kelch domain-containing protein 4-like [Glycine max]
          Length = 660

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/81 (65%), Positives = 60/81 (74%)
 Frame = +2

Query: 149 DDIDTILMNIQXXXXXXXXXXXXXXXXXPSPRSNCSMNINPLKETELIFYGGEFYNGNKT 328
           DDID IL++IQ                 PSPRSNCS+ +NPLKETELI YGGEFYNGNKT
Sbjct: 38  DDIDAILLSIQKEEAKKKDVQVDDNVPAPSPRSNCSLTVNPLKETELILYGGEFYNGNKT 97

Query: 329 FVYGDLYIYDVEKLEWKLITS 391
           FVYGDL+ YDVEKLEWKL++S
Sbjct: 98  FVYGDLFRYDVEKLEWKLVSS 118


>dbj|BAB09450.1| unnamed protein product [Arabidopsis thaliana]
          Length = 596

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/81 (65%), Positives = 58/81 (71%)
 Frame = +2

Query: 149 DDIDTILMNIQXXXXXXXXXXXXXXXXXPSPRSNCSMNINPLKETELIFYGGEFYNGNKT 328
           DDID IL+NIQ                 PSPRSNCS+ INPLKETELI YGGEFYNG KT
Sbjct: 38  DDIDAILLNIQKEEAKKKEVHVEENVAAPSPRSNCSLTINPLKETELILYGGEFYNGQKT 97

Query: 329 FVYGDLYIYDVEKLEWKLITS 391
           +VYGDLY YDVEK EWKL++S
Sbjct: 98  YVYGDLYRYDVEKQEWKLVSS 118


>ref|NP_568723.1| kelch repeat-containing protein [Arabidopsis thaliana]
           gi|15724228|gb|AAL06507.1|AF412054_1 AT5g50310/MXI22_1
           [Arabidopsis thaliana] gi|332008541|gb|AED95924.1| kelch
           repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/81 (65%), Positives = 58/81 (71%)
 Frame = +2

Query: 149 DDIDTILMNIQXXXXXXXXXXXXXXXXXPSPRSNCSMNINPLKETELIFYGGEFYNGNKT 328
           DDID IL+NIQ                 PSPRSNCS+ INPLKETELI YGGEFYNG KT
Sbjct: 38  DDIDAILLNIQKEEAKKKEVHVEENVAAPSPRSNCSLTINPLKETELILYGGEFYNGQKT 97

Query: 329 FVYGDLYIYDVEKLEWKLITS 391
           +VYGDLY YDVEK EWKL++S
Sbjct: 98  YVYGDLYRYDVEKQEWKLVSS 118


>ref|XP_004172697.1| PREDICTED: LOW QUALITY PROTEIN: kelch domain-containing protein
           4-like [Cucumis sativus]
          Length = 291

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/81 (65%), Positives = 59/81 (72%)
 Frame = +2

Query: 149 DDIDTILMNIQXXXXXXXXXXXXXXXXXPSPRSNCSMNINPLKETELIFYGGEFYNGNKT 328
           DDID IL++IQ                 PSPRSNCS+ INPLKETELI YGGEFYNG KT
Sbjct: 38  DDIDAILLSIQKEEAKKKEVHVEENVPAPSPRSNCSLTINPLKETELILYGGEFYNGTKT 97

Query: 329 FVYGDLYIYDVEKLEWKLITS 391
           +VYGDLY YDVEKLEWK+I+S
Sbjct: 98  YVYGDLYRYDVEKLEWKVISS 118


Top