BLASTX nr result

ID: Coptis23_contig00017470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017470
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336707.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32
ref|XP_002329297.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002336687.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
dbj|BAA36225.1| transposase [Ipomoea purpurea]                        127   1e-27
ref|XP_002333722.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27

>ref|XP_002336707.1| predicted protein [Populus trichocarpa] gi|222836562|gb|EEE74969.1|
           predicted protein [Populus trichocarpa]
          Length = 740

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/127 (53%), Positives = 89/127 (70%)
 Frame = +3

Query: 3   RWSSHFLSVKRLIVSFSALSRILENNTKNGSTNSNRGEAKGNLIALRSFKFVFMLHLLHK 182
           RWSSHF S+  LI  + A   +LEN   +GST S RG+A  +   L SF F   LH++  
Sbjct: 411 RWSSHFKSICSLIKMYGATCLVLENIALDGSTYSQRGDAAFSFKLLMSFDFALFLHIMKN 470

Query: 183 TMGITDILCKALQDQSQDIINAMHLVSTTKVLLQKLRDDGWSTFFYEVDLFSKKNNIDMP 362
            MGITD+LC+ALQ +SQDI+NAMHLV++TK L+QKLRDDGW T   EV +F K  +I++P
Sbjct: 471 VMGITDVLCQALQQKSQDILNAMHLVTSTKTLIQKLRDDGWETLLEEVTIFCKHQDIEVP 530

Query: 363 DMDARYT 383
           DMDA ++
Sbjct: 531 DMDACFS 537


>ref|XP_002329297.1| predicted protein [Populus trichocarpa] gi|222870751|gb|EEF07882.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/127 (54%), Positives = 89/127 (70%)
 Frame = +3

Query: 3   RWSSHFLSVKRLIVSFSALSRILENNTKNGSTNSNRGEAKGNLIALRSFKFVFMLHLLHK 182
           RWSSHF S+  LI  + A   +LEN   +GST S  G+A  +   L SF F F+LH++  
Sbjct: 234 RWSSHFKSICSLIKMYGATCLVLENIALDGSTYSQCGDAAFSFKLLMSFDFAFILHIMKN 293

Query: 183 TMGITDILCKALQDQSQDIINAMHLVSTTKVLLQKLRDDGWSTFFYEVDLFSKKNNIDMP 362
            MGITD+LC+ALQ +SQDI+NAMHLV+TTK L+QKLRDDGW T   EV  F K  +I++P
Sbjct: 294 VMGITDVLCQALQQKSQDILNAMHLVTTTKTLIQKLRDDGWETLLEEVISFCKHQDIEVP 353

Query: 363 DMDARYT 383
           DMDA ++
Sbjct: 354 DMDACFS 360


>ref|XP_002336687.1| predicted protein [Populus trichocarpa] gi|222836527|gb|EEE74934.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  140 bits (352), Expect = 1e-31
 Identities = 67/127 (52%), Positives = 89/127 (70%)
 Frame = +3

Query: 3   RWSSHFLSVKRLIVSFSALSRILENNTKNGSTNSNRGEAKGNLIALRSFKFVFMLHLLHK 182
           RWSSHF S+  LI  + A   +LEN   +GST S R +A  +   L SF F   LH++  
Sbjct: 166 RWSSHFKSICSLIKMYGATCLVLENIALDGSTYSQRADAAFSFKLLMSFDFALFLHIMKN 225

Query: 183 TMGITDILCKALQDQSQDIINAMHLVSTTKVLLQKLRDDGWSTFFYEVDLFSKKNNIDMP 362
            MGITD+LC+ALQ +SQDI+NAMHLV++TK+L+QKLRDDGW T   EV +F K  +I++P
Sbjct: 226 VMGITDVLCQALQQKSQDILNAMHLVTSTKILIQKLRDDGWETLLEEVTIFCKHQDIEVP 285

Query: 363 DMDARYT 383
           DMDA ++
Sbjct: 286 DMDACFS 292


>dbj|BAA36225.1| transposase [Ipomoea purpurea]
          Length = 808

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/126 (49%), Positives = 88/126 (69%)
 Frame = +3

Query: 3   RWSSHFLSVKRLIVSFSALSRILENNTKNGSTNSNRGEAKGNLIALRSFKFVFMLHLLHK 182
           RWSSH  S+  L+  FSA   +L N  ++G+T+++RG+A      L SF+FVF++HL+ K
Sbjct: 479 RWSSHLKSISSLMRMFSATCEVLLNIIEDGTTHAHRGDADAAYEVLTSFEFVFIMHLMKK 538

Query: 183 TMGITDILCKALQDQSQDIINAMHLVSTTKVLLQKLRDDGWSTFFYEVDLFSKKNNIDMP 362
            + I+++LC+ALQ QSQDI+NAMHLVS+TK+L+Q LRD GW      V  F +  NI +P
Sbjct: 539 VLEISNMLCQALQLQSQDILNAMHLVSSTKLLIQTLRDSGWDELVASVKSFCETVNITVP 598

Query: 363 DMDARY 380
           D DA+Y
Sbjct: 599 DFDAQY 604


>ref|XP_002333722.1| predicted protein [Populus trichocarpa] gi|222838364|gb|EEE76729.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/112 (54%), Positives = 80/112 (71%)
 Frame = +3

Query: 48  FSALSRILENNTKNGSTNSNRGEAKGNLIALRSFKFVFMLHLLHKTMGITDILCKALQDQ 227
           + A   +LEN   +GST S RG+A  +   L SF F F+LH++   MGITD+LC+ALQ +
Sbjct: 2   YGATCLVLENIALDGSTYSQRGDAAFSFKLLMSFDFAFILHIMKNVMGITDVLCQALQQK 61

Query: 228 SQDIINAMHLVSTTKVLLQKLRDDGWSTFFYEVDLFSKKNNIDMPDMDARYT 383
           SQDI+NAMHLV+TTK L+QKLRDDGW T   EV  F K  +I++PDMDA ++
Sbjct: 62  SQDILNAMHLVTTTKTLIQKLRDDGWETLLEEVTSFCKHQDIEVPDMDACFS 113


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