BLASTX nr result

ID: Coptis23_contig00017468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017468
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330418.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-12
ref|XP_002319389.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-09
ref|XP_003534675.1| PREDICTED: uncharacterized protein At5g23160...    69   2e-09
ref|XP_002525789.1| conserved hypothetical protein [Ricinus comm...    68   4e-09
ref|XP_002523770.1| conserved hypothetical protein [Ricinus comm...    65   3e-08

>ref|XP_002330418.1| predicted protein [Populus trichocarpa] gi|222871803|gb|EEF08934.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 20/302 (6%)
 Frame = +3

Query: 129 TPFKMTNN---KNRVRRTKSSWL-CFGPVSCTGSDK----ETDHDHDLGPVYMKVVKEDN 284
           T  K TN+   +NR  + K+ +L CF PV   G ++    E    +  G   +K VK + 
Sbjct: 4   TKTKKTNSSTDQNRKNKNKNKFLLCFRPVVMDGLERQGLEEGGGHYGGGDPVLKCVKLEI 63

Query: 285 ----------PKKMKSTSEKMIVGRSQKRSPRRIFSRIAKAVFFEASMKKSRKVQQDPYH 434
                     P  + S+S++      +KR  ++  SR+ KA+ FE S+ K  K ++    
Sbjct: 64  KDGEVFPQIFPTNLPSSSKES-TAYPEKRGHKKNISRLLKAILFETSLAKKNKKRK---- 118

Query: 435 ILRNLSTKNEKISDVKSSRKLLKTPKIEEEGNSKNXXXXXXXXXXXXXXXXXXXXXXXXX 614
           +L+ L  ++EK+    +  K     K +E    K+                         
Sbjct: 119 LLQKLK-QSEKVEKESNPEKNSVDSKNKELAK-KDDGINISNSNMTGSSHSSLWSSSSSS 176

Query: 615 XXXXXXXXXXXXKSFRSIS--FEPKQNALEDLKPKTIKKIYSSTANGXXXXXXXXXXXIF 788
                       +SFRS S  F+PKQ+ ++        K ++ST  G           + 
Sbjct: 177 LSLNSRSLSDTSRSFRSNSSEFKPKQDNMQGNG-----KGHTSTI-GLCLVLVSLMVLVL 230

Query: 789 WGRVCAIICTSTWIYFSPLRRKTEDEDEQVVERKIEKERMESREYKKRVVMEGFLERSHS 968
           WG+VCAI+CTSTW++  P  R ++     + ++ ++ E ++S+EYKK ++MEG LERS +
Sbjct: 231 WGKVCAILCTSTWLFLVP--RCSKARINNLSQKILDYEGIDSKEYKKMIIMEGLLERSRN 288

Query: 969 RV 974
            V
Sbjct: 289 HV 290


>ref|XP_002319389.1| predicted protein [Populus trichocarpa] gi|222857765|gb|EEE95312.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 66/256 (25%), Positives = 100/256 (39%), Gaps = 5/256 (1%)
 Frame = +3

Query: 222 KETDHDHDLGPVYMKVVKEDNP--KKMKSTSEKMIVGRSQKRSPRRIFSRIAKAVFFEAS 395
           KE DH   L P    ++ EDN     + S+SE  ++  S K++     SR+ KAVFFE  
Sbjct: 30  KERDHMKRLVP-NSSLLSEDNDTCSAIISSSENSLILHSSKKN----LSRVIKAVFFETI 84

Query: 396 MKKSRKVQQDPYHILRNLSTKNEKISDVKSSRKLLKTPKIEEEGNSKNXXXXXXXXXXXX 575
           +  S+++     ++ ++ S    K S   SS      P      +SK             
Sbjct: 85  L--SKRIHDRKGNLCQD-SNIGSKPSSSSSSSSSSSPPPPPPSMDSKKSLDDTSDHDNTN 141

Query: 576 XXXXXXXXXXXXXXXXXXXXXXXXXKSFRSISFEPKQNALEDLKPKTIKKIYSSTANGXX 755
                                    +    I      N   + K KT+ K      +G  
Sbjct: 142 LVNKVLIDTHQANEVTSCPSSISESRKLSKIKNSRNPNQELEFKAKTMDK------SGIY 195

Query: 756 XXXXXXXXXIFWGRVCAIICTSTWIYFSPLRRKTEDEDEQVVERKIEKERMESRE---YK 926
                    + WG++CAI  T  W+YF P R+      + V       E+ ES++   YK
Sbjct: 196 LFLISLTVTVLWGKLCAIFFTIIWLYFLPRRQHNTSRPQNVTRSLWLPEKEESKDQYSYK 255

Query: 927 KRVVMEGFLERSHSRV 974
           K+V+MEG LER+H RV
Sbjct: 256 KKVIMEGLLERNHQRV 271


>ref|XP_003534675.1| PREDICTED: uncharacterized protein At5g23160-like [Glycine max]
          Length = 253

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 30/64 (46%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
 Frame = +3

Query: 783 IFWGRVCAIICTSTWIYFSPLRRKT---EDEDEQVVERKIEKERMESREYKKRVVMEGFL 953
           +FWGR+CAI+CTS W+Y +P  RK+    ++DE +   K ++  ++S EYKK+V+MEG L
Sbjct: 186 LFWGRLCAILCTSAWLYCTPRFRKSGGYVNDDEDLQTTKSKEVDLDSEEYKKKVIMEGLL 245

Query: 954 ERSH 965
            R+H
Sbjct: 246 GRNH 249


>ref|XP_002525789.1| conserved hypothetical protein [Ricinus communis]
           gi|223534939|gb|EEF36625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 280

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 3/232 (1%)
 Frame = +3

Query: 285 PKKMKSTSEKMIVGRSQKRSPRRIFSRIAKAVFFEASMKKSRKVQQDPYHILRNLSTKNE 464
           P    S      + R  K+S ++ F R  KAVFFE S+ K  K+++      +  ST  E
Sbjct: 61  PSVYPSPEGDAAIARQNKKSKKK-FLRAVKAVFFETSLAK--KIKKRTSTKKKKYST-GE 116

Query: 465 KISDVKSSRKLLKTPKIEEEGNSKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 644
            IS+V     L+K   + ++ + K                                    
Sbjct: 117 TISNVDKDLDLVKEKLLHQKLSKK---------FTGRNIVSYYAPSVNSSSVCSSAPSLN 167

Query: 645 XXKSF--RSISFEPKQNALED-LKPKTIKKIYSSTANGXXXXXXXXXXXIFWGRVCAIIC 815
             K F  R IS  P    LE+ +K +   K +  +  G           + WG+V AI+C
Sbjct: 168 NSKRFLERVISLGPSNPILENNIKKQENGKGHYGSNTGLFLLLVTLTVLVLWGKVYAILC 227

Query: 816 TSTWIYFSPLRRKTEDEDEQVVERKIEKERMESREYKKRVVMEGFLERSHSR 971
           TSTW++F P       + + +   ++  + M+  EYKK+++MEGFL+R+ +R
Sbjct: 228 TSTWLFFVPNWSNVSGK-KLLKNGRVHSQSMDLEEYKKKIIMEGFLDRNRNR 278


>ref|XP_002523770.1| conserved hypothetical protein [Ricinus communis]
           gi|223536982|gb|EEF38619.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 282

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 31/64 (48%), Positives = 41/64 (64%)
 Frame = +3

Query: 783 IFWGRVCAIICTSTWIYFSPLRRKTEDEDEQVVERKIEKERMESREYKKRVVMEGFLERS 962
           + WGR+CAI+CT  W+YF+  RR   D   + +E+   +    S EYKKRVV+EGFLER 
Sbjct: 220 LLWGRLCAILCTCAWLYFT--RRLKTDMSPRQIEKIRGEPDFSSDEYKKRVVLEGFLERD 277

Query: 963 HSRV 974
           H  V
Sbjct: 278 HRPV 281


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