BLASTX nr result

ID: Coptis23_contig00017455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017455
         (973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284059.1| PREDICTED: uncharacterized protein LOC100259...    86   9e-17
emb|CBI20877.3| unnamed protein product [Vitis vinifera]               86   9e-17
ref|XP_002516549.1| catalytic, putative [Ricinus communis] gi|22...    79   4e-16
ref|XP_003636412.1| hypothetical protein MTR_040s0041 [Medicago ...    83   1e-14
ref|XP_002308612.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-14

>ref|XP_002284059.1| PREDICTED: uncharacterized protein LOC100259497 [Vitis vinifera]
          Length = 406

 Score = 86.3 bits (212), Expect(2) = 9e-17
 Identities = 38/56 (67%), Positives = 46/56 (82%)
 Frame = -1

Query: 256 VAPGLASKFDSPDTIPAIAPRPLLILNGAEDPRCPLEGLNTPISKAQAAYKAVDSP 89
           +APGLAS FDSP T+P I+PRPLLILNGAEDPRCPL GL+ P+S+A  AY+  + P
Sbjct: 318 IAPGLASSFDSPYTVPIISPRPLLILNGAEDPRCPLAGLDAPVSRASKAYEEANCP 373



 Score = 27.3 bits (59), Expect(2) = 9e-17
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -2

Query: 102 QLIAQPKIGHQMTPLMV 52
           +LIA+P IGHQMT  MV
Sbjct: 377 KLIAEPGIGHQMTSSMV 393


>emb|CBI20877.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 86.3 bits (212), Expect(2) = 9e-17
 Identities = 38/56 (67%), Positives = 46/56 (82%)
 Frame = -1

Query: 256 VAPGLASKFDSPDTIPAIAPRPLLILNGAEDPRCPLEGLNTPISKAQAAYKAVDSP 89
           +APGLAS FDSP T+P I+PRPLLILNGAEDPRCPL GL+ P+S+A  AY+  + P
Sbjct: 267 IAPGLASSFDSPYTVPIISPRPLLILNGAEDPRCPLAGLDAPVSRASKAYEEANCP 322



 Score = 27.3 bits (59), Expect(2) = 9e-17
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -2

Query: 102 QLIAQPKIGHQMTPLMV 52
           +LIA+P IGHQMT  MV
Sbjct: 326 KLIAEPGIGHQMTSSMV 342


>ref|XP_002516549.1| catalytic, putative [Ricinus communis] gi|223544369|gb|EEF45890.1|
           catalytic, putative [Ricinus communis]
          Length = 431

 Score = 79.0 bits (193), Expect(2) = 4e-16
 Identities = 37/55 (67%), Positives = 42/55 (76%)
 Frame = -1

Query: 256 VAPGLASKFDSPDTIPAIAPRPLLILNGAEDPRCPLEGLNTPISKAQAAYKAVDS 92
           +APGLAS  DSP TIP IAPRPLLI+NGAEDPRCPL G+  P  +AQ AY+   S
Sbjct: 343 IAPGLASSLDSPYTIPTIAPRPLLIVNGAEDPRCPLAGIEIPKLRAQKAYEEAHS 397



 Score = 32.3 bits (72), Expect(2) = 4e-16
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = -2

Query: 102 QLIAQPKIGHQMTPLMV 52
           +LIA+P +GHQMTPLMV
Sbjct: 402 KLIAEPGVGHQMTPLMV 418


>ref|XP_003636412.1| hypothetical protein MTR_040s0041 [Medicago truncatula]
           gi|355502347|gb|AES83550.1| hypothetical protein
           MTR_040s0041 [Medicago truncatula]
          Length = 427

 Score = 82.8 bits (203), Expect(2) = 1e-14
 Identities = 39/54 (72%), Positives = 45/54 (83%)
 Frame = -1

Query: 256 VAPGLASKFDSPDTIPAIAPRPLLILNGAEDPRCPLEGLNTPISKAQAAYKAVD 95
           +APGLAS+FDSP +IP+IAPRPLLILNGAEDPRCPL GL  P +KA  A+K  D
Sbjct: 333 IAPGLASQFDSPYSIPSIAPRPLLILNGAEDPRCPLAGLEIPRAKASQAHKNFD 386



 Score = 23.5 bits (49), Expect(2) = 1e-14
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 102 QLIAQPKIGHQMTPLMV 52
           Q IA+P I HQ+T  MV
Sbjct: 392 QFIAEPGIEHQITKFMV 408


>ref|XP_002308612.1| predicted protein [Populus trichocarpa] gi|222854588|gb|EEE92135.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 76.3 bits (186), Expect(2) = 2e-14
 Identities = 35/50 (70%), Positives = 41/50 (82%)
 Frame = -1

Query: 256 VAPGLASKFDSPDTIPAIAPRPLLILNGAEDPRCPLEGLNTPISKAQAAY 107
           +APGLAS FDSP T+PA+APRP+LI+NGAEDPRC L GL  P S+A  AY
Sbjct: 272 IAPGLASCFDSPYTVPAVAPRPMLIVNGAEDPRCSLAGLEVPKSRAIKAY 321



 Score = 29.3 bits (64), Expect(2) = 2e-14
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -2

Query: 102 QLIAQPKIGHQMTPLMV 52
           +L+A+P IGH+MTP MV
Sbjct: 331 KLVAEPGIGHRMTPFMV 347


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