BLASTX nr result

ID: Coptis23_contig00017453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017453
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77677.1| unknown [Picea sitchensis]                              79   3e-13
ref|XP_002274027.2| PREDICTED: protein TRANSPARENT TESTA 12 isof...    77   2e-12
ref|XP_003572490.1| PREDICTED: protein TRANSPARENT TESTA 12-like...    77   2e-12
emb|CBI23251.3| unnamed protein product [Vitis vinifera]               77   2e-12
gb|ABK24492.1| unknown [Picea sitchensis]                              77   2e-12

>gb|ADE77677.1| unknown [Picea sitchensis]
          Length = 517

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 33/70 (47%), Positives = 50/70 (71%)
 Frame = +2

Query: 2   LVGLTTGAILGFKFHFGLQGLWSGVILGIALQTVILVVITLRTDWEKEAALAKVRISTWE 181
           ++G+  G +LGFKF FG++G+WSG++ G  LQT+IL++IT RT+W KE   A  R+STW+
Sbjct: 437 VIGIPLGCLLGFKFDFGVKGIWSGMLGGTCLQTIILLIITYRTNWNKEVEKASHRLSTWD 496

Query: 182 RSTDKCLNGS 211
                 L+G+
Sbjct: 497 NKAPPNLDGN 506


>ref|XP_002274027.2| PREDICTED: protein TRANSPARENT TESTA 12 isoform 1 [Vitis vinifera]
          Length = 504

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/68 (48%), Positives = 48/68 (70%)
 Frame = +2

Query: 2   LVGLTTGAILGFKFHFGLQGLWSGVILGIALQTVILVVITLRTDWEKEAALAKVRISTWE 181
           +VG+  GA+LGFKF  G++G+WSG+I G  +QT+IL+ +T RTDW KE   AK R+ TW+
Sbjct: 437 VVGIPLGALLGFKFDLGVKGIWSGMIGGTVMQTLILLWVTYRTDWNKEVEKAKSRLETWD 496

Query: 182 RSTDKCLN 205
            +    L+
Sbjct: 497 TNNSASLD 504


>ref|XP_003572490.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Brachypodium
           distachyon]
          Length = 510

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = +2

Query: 5   VGLTTGAILGFKFHFGLQGLWSGVILGIALQTVILVVITLRTDWEKEAALAKVRISTWER 184
           +G+  G IL F  H G++G+W+G++ G+ALQTVILVVIT+RTDW KEA  A  RI  W  
Sbjct: 440 IGIPVGYILAFPMHQGIRGMWAGMLTGVALQTVILVVITMRTDWNKEAREASSRIQQWSG 499

Query: 185 STDK 196
            + K
Sbjct: 500 GSAK 503


>emb|CBI23251.3| unnamed protein product [Vitis vinifera]
          Length = 431

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/68 (48%), Positives = 48/68 (70%)
 Frame = +2

Query: 2   LVGLTTGAILGFKFHFGLQGLWSGVILGIALQTVILVVITLRTDWEKEAALAKVRISTWE 181
           +VG+  GA+LGFKF  G++G+WSG+I G  +QT+IL+ +T RTDW KE   AK R+ TW+
Sbjct: 364 VVGIPLGALLGFKFDLGVKGIWSGMIGGTVMQTLILLWVTYRTDWNKEVEKAKSRLETWD 423

Query: 182 RSTDKCLN 205
            +    L+
Sbjct: 424 TNNSASLD 431


>gb|ABK24492.1| unknown [Picea sitchensis]
          Length = 513

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 31/59 (52%), Positives = 45/59 (76%)
 Frame = +2

Query: 2   LVGLTTGAILGFKFHFGLQGLWSGVILGIALQTVILVVITLRTDWEKEAALAKVRISTW 178
           ++G+  G +LGFKF FG++G+W G++ G  LQT+IL+VIT +TDW+KE   A  R+STW
Sbjct: 434 IIGIPVGCLLGFKFGFGVKGIWLGMLGGTCLQTIILIVITYKTDWKKEVEKASQRLSTW 492


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