BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017451
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285053.2| PREDICTED: F-box protein GID2-like [Vitis vi...   124   1e-26
ref|XP_004141280.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   117   8e-25
ref|XP_002327183.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002510145.1| F-box protein GID2, putative [Ricinus commun...   115   3e-24
ref|XP_004163240.1| PREDICTED: F-box protein GID2-like [Cucumis ...   115   4e-24

>ref|XP_002285053.2| PREDICTED: F-box protein GID2-like [Vitis vinifera]
          Length = 184

 Score =  124 bits (310), Expect = 1e-26
 Identities = 65/114 (57%), Positives = 74/114 (64%), Gaps = 21/114 (18%)
 Frame = -3

Query: 373 KTSNDERLWEMVCTRHWVNIGCPEEQVRSVVLAFGGFRLLHSLYLRPVLK---------- 224
           +TS DERLWE++CTRHW NIGC  +QVRSVVLA GGFR LHSLYL P+ K          
Sbjct: 71  RTSQDERLWELICTRHWANIGCGNQQVRSVVLALGGFRRLHSLYLWPLSKPQASSSSSPP 130

Query: 223 -----ATALS------QYQSSTIPNKWGKDEVHLSLSLLSIRYYEMMDCNYKGR 95
                +TALS             P +WGKDEVHLSLSLLSIRYYE M+ N +GR
Sbjct: 131 SSSWPSTALSPPFAPHSMMRPKFPTRWGKDEVHLSLSLLSIRYYEKMNFNNRGR 184


>ref|XP_004141280.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein GID2-like [Cucumis
           sativus]
          Length = 185

 Score =  117 bits (294), Expect = 8e-25
 Identities = 59/114 (51%), Positives = 73/114 (64%), Gaps = 21/114 (18%)
 Frame = -3

Query: 373 KTSNDERLWEMVCTRHWVNIGCPEEQVRSVVLAFGGFRLLHSLYLRPVLKATALSQYQSS 194
           KT+ DERLWE++CTRHW N GC  +Q+RSVVLA GGFR LHSL++ P+ K  + S   SS
Sbjct: 72  KTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQSSSSSSSS 131

Query: 193 TI---------------------PNKWGKDEVHLSLSLLSIRYYEMMDCNYKGR 95
            +                     P +WGKDEVHLSLSLLSIRYYE M+ + +GR
Sbjct: 132 HLHPSSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR 185


>ref|XP_002327183.1| predicted protein [Populus trichocarpa] gi|222835498|gb|EEE73933.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/108 (53%), Positives = 72/108 (66%), Gaps = 15/108 (13%)
 Frame = -3

Query: 373 KTSNDERLWEMVCTRHWVNIGCPEEQVRSVVLAFGGFRLLHSLYLRPVLKATALSQYQSS 194
           +T  DERLWE++CT+HW NIGC  +Q+RSVVLA GGFR LHS YL P+ K  +     SS
Sbjct: 76  RTVQDERLWELICTKHWANIGCGNQQLRSVVLALGGFRRLHSQYLWPLSKPHSTPAPSSS 135

Query: 193 TIPN---------------KWGKDEVHLSLSLLSIRYYEMMDCNYKGR 95
           + P+               +WGKDEVHLSLSLLSIRYYE M+ + +GR
Sbjct: 136 SSPSAWNPFPKMIGNKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR 183


>ref|XP_002510145.1| F-box protein GID2, putative [Ricinus communis]
           gi|223550846|gb|EEF52332.1| F-box protein GID2, putative
           [Ricinus communis]
          Length = 179

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/99 (59%), Positives = 71/99 (71%), Gaps = 12/99 (12%)
 Frame = -3

Query: 373 KTSNDERLWEMVCTRHWVNIGCPEEQVRSVVLAFGGFRLLHSLYLRPVLK-------ATA 215
           +T+ DERLWE++CTRHW NIGC  +Q+RSVVLA GGFR LHS YL P+ K       A++
Sbjct: 73  RTAQDERLWELICTRHWANIGCGNQQLRSVVLALGGFRRLHSQYLWPLSKPQSSTSAASS 132

Query: 214 LSQYQS-----STIPNKWGKDEVHLSLSLLSIRYYEMMD 113
            S + S     S  P +WGKDEVHLSLSLLSIRYYE M+
Sbjct: 133 SSSWPSFPPIRSKPPARWGKDEVHLSLSLLSIRYYEKMN 171


>ref|XP_004163240.1| PREDICTED: F-box protein GID2-like [Cucumis sativus]
          Length = 190

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/119 (49%), Positives = 73/119 (61%), Gaps = 26/119 (21%)
 Frame = -3

Query: 373 KTSNDERLWEMVCTRHWVNIGCPEEQVRSVVLAFGGFRLLHSLYLRPVLKATALSQYQSS 194
           KT+ DERLWE++CTRHW N GC  +Q+RSVVLA GGFR LHSL++ P+ K  + S   SS
Sbjct: 72  KTAEDERLWELICTRHWANTGCGNQQLRSVVLALGGFRRLHSLFIWPLTKPQSSSSSSSS 131

Query: 193 TI--------------------------PNKWGKDEVHLSLSLLSIRYYEMMDCNYKGR 95
           +                           P +WGKDEVHLSLSLLSIRYYE M+ + +GR
Sbjct: 132 SSSSSSSSASSSSSASWSPFPAMIGSKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR 190