BLASTX nr result

ID: Coptis23_contig00017448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017448
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266933.1| PREDICTED: uncharacterized protein LOC100258...   142   1e-31
ref|XP_003536549.1| PREDICTED: uncharacterized protein LOC100788...   129   1e-27
ref|XP_002305604.1| predicted protein [Populus trichocarpa] gi|2...   128   2e-27
ref|XP_004145101.1| PREDICTED: uncharacterized protein LOC101211...   116   8e-24
ref|XP_002518522.1| conserved hypothetical protein [Ricinus comm...   116   8e-24

>ref|XP_002266933.1| PREDICTED: uncharacterized protein LOC100258839 [Vitis vinifera]
           gi|302144074|emb|CBI23179.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  142 bits (359), Expect = 1e-31
 Identities = 74/129 (57%), Positives = 96/129 (74%), Gaps = 4/129 (3%)
 Frame = +2

Query: 485 MGIRIKGICKGFRFISQIFVVSKERELEIGYPTEVKHVAHIGWESQCNT-PSWMNDFNTS 661
           M  ++KGI KGF++ISQIFVV KERE+EIGYPT+VKHVAHIGW+    + PSWMN++ ++
Sbjct: 1   MATKMKGIYKGFKYISQIFVV-KEREMEIGYPTDVKHVAHIGWDGPSGSAPSWMNEYKST 59

Query: 662 SNFSTRSLSNLGDEPRDHYTGPV---STWSSQDFEQSMARLPASDNIKESPPNGLPKVPK 832
            +FS+ SL +   EPRD  T  +   STWSSQDFEQSM + P S+  K+ PP  +P +PK
Sbjct: 60  HDFSSSSLGSF-IEPRD--TNNIVARSTWSSQDFEQSMGQHPVSEMFKDCPPTDVPNIPK 116

Query: 833 KYKRKNTKS 859
           K+KRK TKS
Sbjct: 117 KHKRKKTKS 125


>ref|XP_003536549.1| PREDICTED: uncharacterized protein LOC100788423 [Glycine max]
          Length = 186

 Score =  129 bits (324), Expect = 1e-27
 Identities = 69/126 (54%), Positives = 85/126 (67%), Gaps = 1/126 (0%)
 Frame = +2

Query: 485 MGIRIKGICKGFRFISQIFVVSKERELEIGYPTEVKHVAHIGWESQCNT-PSWMNDFNTS 661
           M   +KGI K F++I+QIFVV KERE+EIGYPT+VKHVAHIGW+    T PSWMNDF T+
Sbjct: 1   MATTLKGIYKSFKYITQIFVV-KEREMEIGYPTDVKHVAHIGWDGPSGTGPSWMNDFKTA 59

Query: 662 SNFSTRSLSNLGDEPRDHYTGPVSTWSSQDFEQSMARLPASDNIKESPPNGLPKVPKKYK 841
            +FST SL NLG+    +     ++WSSQDFE S    P S+  K  P  G+   PKK K
Sbjct: 60  PDFST-SLGNLGELSDPNAMAVTTSWSSQDFEVSTGSQPTSNIYKGIPSAGVSHAPKKSK 118

Query: 842 RKNTKS 859
           +K TKS
Sbjct: 119 KKKTKS 124


>ref|XP_002305604.1| predicted protein [Populus trichocarpa] gi|222848568|gb|EEE86115.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  128 bits (322), Expect = 2e-27
 Identities = 66/126 (52%), Positives = 87/126 (69%), Gaps = 1/126 (0%)
 Frame = +2

Query: 485 MGIRIKGICKGFRFISQIFVVSKERELEIGYPTEVKHVAHIGWESQC-NTPSWMNDFNTS 661
           M  +IKGI KGF++ISQIFVV KERE+EIGYPT+VKHVAHIGW+    + PSWMN+F T 
Sbjct: 1   MATKIKGIYKGFKYISQIFVV-KEREMEIGYPTDVKHVAHIGWDGHSGSAPSWMNEFKTP 59

Query: 662 SNFSTRSLSNLGDEPRDHYTGPVSTWSSQDFEQSMARLPASDNIKESPPNGLPKVPKKYK 841
            +FST +++N    PRD  +  +S WSSQDF+ S+      +   + PP+ LP VPKK K
Sbjct: 60  PDFSTTTVAN----PRDSSSVILSPWSSQDFDHSLGHQTMPNVFNDIPPSDLPNVPKKPK 115

Query: 842 RKNTKS 859
            +  K+
Sbjct: 116 IRKKKT 121


>ref|XP_004145101.1| PREDICTED: uncharacterized protein LOC101211354 [Cucumis sativus]
           gi|449472647|ref|XP_004153657.1| PREDICTED:
           uncharacterized protein LOC101222050 [Cucumis sativus]
           gi|449526766|ref|XP_004170384.1| PREDICTED:
           uncharacterized LOC101222050 [Cucumis sativus]
          Length = 159

 Score =  116 bits (291), Expect = 8e-24
 Identities = 65/126 (51%), Positives = 84/126 (66%), Gaps = 5/126 (3%)
 Frame = +2

Query: 485 MGIRIKGICKGFRFISQIFVVSKERELEIGYPTEVKHVAHIGWESQCNT-PSWMNDFNTS 661
           M  ++KGI K F++ISQIFVV KERE+EIGYPT+VKHVAHIGW+    T PSWMN+F T+
Sbjct: 1   MSNKLKGIYKSFKYISQIFVV-KEREMEIGYPTDVKHVAHIGWDGPSGTAPSWMNEFKTA 59

Query: 662 -SNFSTRSLSNLGDEPRDHYTGPV---STWSSQDFEQSMARLPASDNIKESPPNGLPKVP 829
             +FS  S  ++ D  RD  +  V   +TWSS DF+Q+M R   SD   E P   +P +P
Sbjct: 60  PEHFSAASFGDISDR-RDSSSTAVTAPTTWSSLDFDQAMLRQQTSDFFGELPRTEIPNLP 118

Query: 830 KKYKRK 847
            K K+K
Sbjct: 119 TKPKKK 124


>ref|XP_002518522.1| conserved hypothetical protein [Ricinus communis]
           gi|223542367|gb|EEF43909.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score =  116 bits (291), Expect = 8e-24
 Identities = 68/131 (51%), Positives = 86/131 (65%), Gaps = 8/131 (6%)
 Frame = +2

Query: 485 MGIRIKGICKG-FRFISQIFVVSKERELEIGYPTEVKHVAHIGWESQC-NTPSWMNDFNT 658
           M  +IKGI KG F+FISQIFVV KERE+EIGYPT+VKHVAHIGW+    + PSWMNDF T
Sbjct: 1   MATKIKGIYKGSFKFISQIFVV-KEREMEIGYPTDVKHVAHIGWDGPSGSAPSWMNDFKT 59

Query: 659 SSNFSTRSLSNLGDEPRDHYTGPVSTWSSQDFEQSMARLPAS----DNIKES--PPNGLP 820
             +FS+ +L+N  D          S WSSQDF+QS+   P S     NI  S  PP+ +P
Sbjct: 60  PPDFSSTTLANTRDSDS---IANFSPWSSQDFDQSIGSQPMSTKSFSNIVPSSDPPSSIP 116

Query: 821 KVPKKYKRKNT 853
           K  K+ K+ ++
Sbjct: 117 KKSKRKKKSSS 127


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