BLASTX nr result

ID: Coptis23_contig00017433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017433
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280587.1| PREDICTED: uncharacterized protein At1g01500...    82   3e-14
ref|XP_004143843.1| PREDICTED: uncharacterized protein LOC101203...    71   8e-11
dbj|BAC42625.1| unknown protein [Arabidopsis thaliana]                 68   7e-10
ref|NP_194142.1| uncharacterized protein [Arabidopsis thaliana] ...    68   7e-10
ref|XP_002297941.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10

>ref|XP_002280587.1| PREDICTED: uncharacterized protein At1g01500-like [Vitis vinifera]
          Length = 250

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/79 (55%), Positives = 55/79 (69%), Gaps = 7/79 (8%)
 Frame = +1

Query: 1   DEIPEETELEV-CDSCV------EEMESEFDGAEDCKELSKDMEIQLEGVRWAVDVGIWV 159
           +EIPEE E+E   D C       EE + E DG  DC+  SK+ME+ +EG  WAVD+GIWV
Sbjct: 169 EEIPEEREVETESDGCNCFCEEDEEKDYESDGG-DCEVNSKEMEMDIEGFGWAVDLGIWV 227

Query: 160 MCLGVGYLVSKVSTKSLRR 216
           MCLG GYL+S+ S+KSLRR
Sbjct: 228 MCLGAGYLLSRASSKSLRR 246


>ref|XP_004143843.1| PREDICTED: uncharacterized protein LOC101203014 [Cucumis sativus]
           gi|449509396|ref|XP_004163576.1| PREDICTED:
           uncharacterized protein LOC101227908 [Cucumis sativus]
          Length = 256

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 9/80 (11%)
 Frame = +1

Query: 4   EIPEETEL----EVCDSCVEE--MESEFDGAEDCKELS--KDMEIQLEGVRWAVDVGIWV 159
           EIPE  E+    E CD C  +    SE DG +D  E     ++E+++EGVRWAVD+GIW 
Sbjct: 173 EIPEGREVDGYCEGCDCCCGDDGSSSEDDGGDDDSEDGGGTEVEMEVEGVRWAVDLGIWA 232

Query: 160 MCLGVGYLVSKVS-TKSLRR 216
           +CLGVGYLVS+V+ +K+LRR
Sbjct: 233 VCLGVGYLVSRVAHSKTLRR 252


>dbj|BAC42625.1| unknown protein [Arabidopsis thaliana]
          Length = 250

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 8/78 (10%)
 Frame = +1

Query: 1   DEIPEETELEVCDS------CVEEMESEFDGAEDCKEL--SKDMEIQLEGVRWAVDVGIW 156
           +EIPEE E E  DS      C    ES+ DG  + +E+  + +ME + EG+ WAVD+GIW
Sbjct: 162 EEIPEERE-EGRDSDGGVCFCTCSGESD-DGEGEWEEVEWTAEMESETEGMGWAVDLGIW 219

Query: 157 VMCLGVGYLVSKVSTKSL 210
           VMCLGVGYLVSK STK+L
Sbjct: 220 VMCLGVGYLVSKASTKTL 237


>ref|NP_194142.1| uncharacterized protein [Arabidopsis thaliana]
           gi|2262106|gb|AAB63614.1| hypothetical protein
           [Arabidopsis thaliana] gi|5668639|emb|CAB51654.1|
           putative protein [Arabidopsis thaliana]
           gi|7269260|emb|CAB81329.1| putative protein [Arabidopsis
           thaliana] gi|332659451|gb|AEE84851.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 250

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 8/78 (10%)
 Frame = +1

Query: 1   DEIPEETELEVCDS------CVEEMESEFDGAEDCKEL--SKDMEIQLEGVRWAVDVGIW 156
           +EIPEE E E  DS      C    ES+ DG  + +E+  + +ME + EG+ WAVD+GIW
Sbjct: 162 EEIPEERE-EGRDSDGGVCFCTCSGESD-DGEGEWEEVEWTAEMESETEGMGWAVDLGIW 219

Query: 157 VMCLGVGYLVSKVSTKSL 210
           VMCLGVGYLVSK STK+L
Sbjct: 220 VMCLGVGYLVSKASTKTL 237


>ref|XP_002297941.1| predicted protein [Populus trichocarpa] gi|222845199|gb|EEE82746.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = +1

Query: 70  DGAEDCKELSKDMEIQLEGVRWAVDVGIWVMCLGVGYLVSKVSTKSLRRMI 222
           D  E C    + +E++LEGVRWA+DVG+WV+CLGVG++VS+ S KSLRR++
Sbjct: 200 DLEEWCGPDCEKVEMELEGVRWAIDVGVWVVCLGVGFMVSRASAKSLRRLL 250


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