BLASTX nr result

ID: Coptis23_contig00017425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017425
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553647.1| PREDICTED: homeobox protein LUMINIDEPENDENS-...   103   2e-20
ref|XP_004160562.1| PREDICTED: homeobox protein LUMINIDEPENDENS-...   100   2e-19
ref|XP_004136181.1| PREDICTED: homeobox protein LUMINIDEPENDENS-...   100   2e-19
ref|XP_003625888.1| LUMINIDEPENDENS-like protein [Medicago trunc...    96   4e-18
ref|XP_002520657.1| Homeobox protein LUMINIDEPENDENS, putative [...    95   7e-18

>ref|XP_003553647.1| PREDICTED: homeobox protein LUMINIDEPENDENS-like [Glycine max]
          Length = 1024

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/91 (52%), Positives = 66/91 (72%), Gaps = 5/91 (5%)
 Frame = +3

Query: 3   CHLPLHKAQPAQMSAILQTVNRLRFYQTSDISNRAKVLLSRWSKLFVRSHNLKRPSSTPV 182
           CHLPLHKA P  +SAILQ+VN+LRFY+TSDISNRA+VLLS+WSKLF R+  +K+P+   +
Sbjct: 260 CHLPLHKAIPMHISAILQSVNKLRFYRTSDISNRARVLLSKWSKLFARNQVIKKPNGVKI 319

Query: 183 ATQKEKNLWQSD-----ISTIEWHANLDLPE 260
           +    K +  S      + +  WH+N+D+PE
Sbjct: 320 SIDGHKEMMLSQSIGQFMGSESWHSNIDVPE 350


>ref|XP_004160562.1| PREDICTED: homeobox protein LUMINIDEPENDENS-like [Cucumis sativus]
          Length = 438

 Score =  100 bits (248), Expect = 2e-19
 Identities = 54/91 (59%), Positives = 67/91 (73%), Gaps = 5/91 (5%)
 Frame = +3

Query: 3   CHLPLHKAQPAQMSAILQTVNRLRFYQTSDISNRAKVLLSRWSKLFVRSHNLKRPSSTPV 182
           CHLPLHKA P  +SAILQ+VN LRFY+TSDISNRA++LLSRWSKL  RS  LK+P+   +
Sbjct: 295 CHLPLHKALPVHISAILQSVNYLRFYRTSDISNRARILLSRWSKLLARSQALKKPNGVKL 354

Query: 183 AT--QKEKNLWQS--DISTIE-WHANLDLPE 260
            T  Q +  L QS  DI + E W +N+D+PE
Sbjct: 355 LTNVQTDMILKQSIGDIMSDESWRSNMDMPE 385


>ref|XP_004136181.1| PREDICTED: homeobox protein LUMINIDEPENDENS-like [Cucumis sativus]
          Length = 1049

 Score =  100 bits (248), Expect = 2e-19
 Identities = 54/91 (59%), Positives = 67/91 (73%), Gaps = 5/91 (5%)
 Frame = +3

Query: 3   CHLPLHKAQPAQMSAILQTVNRLRFYQTSDISNRAKVLLSRWSKLFVRSHNLKRPSSTPV 182
           CHLPLHKA P  +SAILQ+VN LRFY+TSDISNRA++LLSRWSKL  RS  LK+P+   +
Sbjct: 273 CHLPLHKALPVHISAILQSVNYLRFYRTSDISNRARILLSRWSKLLARSQALKKPNGVKL 332

Query: 183 AT--QKEKNLWQS--DISTIE-WHANLDLPE 260
            T  Q +  L QS  DI + E W +N+D+PE
Sbjct: 333 LTNVQTDMILKQSIGDIMSDESWRSNMDMPE 363


>ref|XP_003625888.1| LUMINIDEPENDENS-like protein [Medicago truncatula]
           gi|355500903|gb|AES82106.1| LUMINIDEPENDENS-like protein
           [Medicago truncatula]
          Length = 1047

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/91 (56%), Positives = 65/91 (71%), Gaps = 5/91 (5%)
 Frame = +3

Query: 3   CHLPLHKAQPAQMSAILQTVNRLRFYQTSDISNRAKVLLSRWSKLFVRSHNLKRPSSTPV 182
           CHLPLHKA PA +SA+LQ+VNRLRFY+TSDISNRA+VLLS+WSKL  R+  +K+P+    
Sbjct: 260 CHLPLHKAIPAHISALLQSVNRLRFYRTSDISNRARVLLSKWSKLLTRNQAIKKPNGVKR 319

Query: 183 A--TQKEKNLWQSD---ISTIEWHANLDLPE 260
           +   QKE  L QS+   +    WH   D+PE
Sbjct: 320 SGDGQKETRLSQSNGQLVGPESWH--FDVPE 348


>ref|XP_002520657.1| Homeobox protein LUMINIDEPENDENS, putative [Ricinus communis]
           gi|223540042|gb|EEF41619.1| Homeobox protein
           LUMINIDEPENDENS, putative [Ricinus communis]
          Length = 1021

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/85 (54%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
 Frame = +3

Query: 3   CHLPLHKAQPAQMSAILQTVNRLRFYQTSDISNRAKVLLSRWSKLFVRSHNLKRPSSTPV 182
           CHLPLHKA P  MSAIL +VNRLRFY+TSDISNRA+VLLSRWSK+F R+  +K+P+    
Sbjct: 262 CHLPLHKAVPEHMSAILHSVNRLRFYRTSDISNRARVLLSRWSKMFARAQAMKKPNGMKS 321

Query: 183 ATQKEKNLWQSDISTIE----WHAN 245
           +   ++ + +  I  I     WH N
Sbjct: 322 SMDPQEMILKQSIDEIMGNELWHPN 346


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