BLASTX nr result

ID: Coptis23_contig00017424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017424
         (1766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-25
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-24
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-24
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-23
ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...   107   8e-21

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  122 bits (305), Expect = 4e-25
 Identities = 73/224 (32%), Positives = 107/224 (47%), Gaps = 1/224 (0%)
 Frame = -3

Query: 1371 LGHSEVGKKNCTYIKPAVVDGKNVVHVKSAQFADIQKRYGKLIVGSFVGKKLGILYVKEI 1192
            LG S V  +N  +  P   DG+  V      F D  + +   +VG FVG+KL    V  I
Sbjct: 117  LGISSV--RNLHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSI 174

Query: 1191 VTRVWRLKN-SFTMKSQGNMFTFEFQSDEDRDTVLDKGSFQIASQLFIVRPWKLFIEVNT 1015
              R+W     S  + S    F F F S +    VL++  + +A++  +++ W+  ++   
Sbjct: 175  AKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLK 234

Query: 1014 RALNTIPIWIIMKKFPLEMWDSAGFSQVDSAVGIPMFTNKLMEEMTRTSFARICVEIDAD 835
              L  +P+W+ +   PLE W   G S V SAVG+P+  +       R S+AR+CVEIDA 
Sbjct: 235  DDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDAS 294

Query: 834  CTFSKEVPVVVDQVRSFMVPTEYNWKSPFCSCCKAFGHSTAKCA 703
             T  KE  +         +  EY W    CS C  FGH+TA CA
Sbjct: 295  KTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCA 338


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
            predicted protein [Populus trichocarpa]
          Length = 809

 Score =  119 bits (299), Expect = 2e-24
 Identities = 71/224 (31%), Positives = 107/224 (47%), Gaps = 1/224 (0%)
 Frame = -3

Query: 1371 LGHSEVGKKNCTYIKPAVVDGKNVVHVKSAQFADIQKRYGKLIVGSFVGKKLGILYVKEI 1192
            LG S V  +N  +  P + DG+  V      F D  + +   +VG FVG+KL    V  I
Sbjct: 117  LGISSV--RNLHFAPPTMTDGRVKVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSI 174

Query: 1191 VTRVWRLKN-SFTMKSQGNMFTFEFQSDEDRDTVLDKGSFQIASQLFIVRPWKLFIEVNT 1015
              R+W     S  + S    F F F S +    VL++  + +A++  +++ W+  ++   
Sbjct: 175  AKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLK 234

Query: 1014 RALNTIPIWIIMKKFPLEMWDSAGFSQVDSAVGIPMFTNKLMEEMTRTSFARICVEIDAD 835
                 +P+W+ +   PLE W   G S V SA+G+P+  +       R S+AR+CVEIDA 
Sbjct: 235  DDFARVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEIDAS 294

Query: 834  CTFSKEVPVVVDQVRSFMVPTEYNWKSPFCSCCKAFGHSTAKCA 703
             T  KE  +         +  EY W    CS C  FGH+TA CA
Sbjct: 295  KTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCA 338


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
            predicted protein [Populus trichocarpa]
          Length = 1166

 Score =  119 bits (299), Expect = 2e-24
 Identities = 72/224 (32%), Positives = 106/224 (47%), Gaps = 1/224 (0%)
 Frame = -3

Query: 1371 LGHSEVGKKNCTYIKPAVVDGKNVVHVKSAQFADIQKRYGKLIVGSFVGKKLGILYVKEI 1192
            LG S V  +N  +  P   DG+  V      F D  + +   +VG FVG+KL    V  I
Sbjct: 117  LGISSV--RNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSI 174

Query: 1191 VTRVWRLKN-SFTMKSQGNMFTFEFQSDEDRDTVLDKGSFQIASQLFIVRPWKLFIEVNT 1015
              R+W     S  + S    F F F   +    VL++  + +A++  +++ W+  ++   
Sbjct: 175  AKRIWSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLK 234

Query: 1014 RALNTIPIWIIMKKFPLEMWDSAGFSQVDSAVGIPMFTNKLMEEMTRTSFARICVEIDAD 835
              L  +P+W+ +   PLE W   G S V SAVG+P+  +       R S+AR+CVEIDA 
Sbjct: 235  DDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDAS 294

Query: 834  CTFSKEVPVVVDQVRSFMVPTEYNWKSPFCSCCKAFGHSTAKCA 703
             T  KE  +         +  EY W    CS C  FGH+TA CA
Sbjct: 295  KTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCA 338



 Score =  119 bits (299), Expect = 2e-24
 Identities = 72/224 (32%), Positives = 106/224 (47%), Gaps = 1/224 (0%)
 Frame = -3

Query: 1371 LGHSEVGKKNCTYIKPAVVDGKNVVHVKSAQFADIQKRYGKLIVGSFVGKKLGILYVKEI 1192
            LG S V  +N  +  P   DG+  V      F D  + +   +VG FVG+KL    V  I
Sbjct: 910  LGISSV--RNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSI 967

Query: 1191 VTRVWRLKN-SFTMKSQGNMFTFEFQSDEDRDTVLDKGSFQIASQLFIVRPWKLFIEVNT 1015
              R+W     S  + S    F F F   +    VL++  + +A++  +++ W+  ++   
Sbjct: 968  AKRIWSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLK 1027

Query: 1014 RALNTIPIWIIMKKFPLEMWDSAGFSQVDSAVGIPMFTNKLMEEMTRTSFARICVEIDAD 835
              L  +P+W+ +   PLE W   G S V SAVG+P+  +       R S+AR+CVEIDA 
Sbjct: 1028 DDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDAS 1087

Query: 834  CTFSKEVPVVVDQVRSFMVPTEYNWKSPFCSCCKAFGHSTAKCA 703
             T  KE  +         +  EY W    CS C  FGH+TA CA
Sbjct: 1088 KTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCA 1131


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
            predicted protein [Populus trichocarpa]
          Length = 761

 Score =  115 bits (288), Expect = 4e-23
 Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 1/224 (0%)
 Frame = -3

Query: 1371 LGHSEVGKKNCTYIKPAVVDGKNVVHVKSAQFADIQKRYGKLIVGSFVGKKLGILYVKEI 1192
            LG S V  +N  +  P + DG+  V      F D  + +   +VG F+G+KL    V  I
Sbjct: 117  LGISSV--RNLHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFMGQKLPYPVVNSI 174

Query: 1191 VTRVWRLKNSFTMKSQGN-MFTFEFQSDEDRDTVLDKGSFQIASQLFIVRPWKLFIEVNT 1015
              R+W       + S  N  F F F S +    VL++  + +A+   +++ W+  ++   
Sbjct: 175  AKRIWSSYGLLEVLSSDNGFFIFNFDSVDRATNVLERAPWHMANMPLVLKRWQPNMQFLK 234

Query: 1014 RALNTIPIWIIMKKFPLEMWDSAGFSQVDSAVGIPMFTNKLMEEMTRTSFARICVEIDAD 835
              L  +P+W+ +   PLE W   G S V SA+G+P+  +       R S+AR+CVEIDA 
Sbjct: 235  DDLARVPVWVWLYNVPLEYWTIKGLSCVASAIGVPLHADHTTFLRKRLSYARVCVEIDAS 294

Query: 834  CTFSKEVPVVVDQVRSFMVPTEYNWKSPFCSCCKAFGHSTAKCA 703
             T  KE  +         +  EY W    CS C  FGH+   CA
Sbjct: 295  KTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTRTLCA 338


>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
            sativus]
          Length = 169

 Score =  107 bits (268), Expect = 8e-21
 Identities = 54/167 (32%), Positives = 90/167 (53%)
 Frame = -3

Query: 1146 QGNMFTFEFQSDEDRDTVLDKGSFQIASQLFIVRPWKLFIEVNTRALNTIPIWIIMKKFP 967
            +  +  F+F+     + +L +G + +  +  ++R W   I   T   +++P+WI + + P
Sbjct: 2    ENGIICFQFKCLNSIEWILSRGPWHLGGKPMLLRKWTPGIVPETFVFDSVPVWIKLGRIP 61

Query: 966  LEMWDSAGFSQVDSAVGIPMFTNKLMEEMTRTSFARICVEIDADCTFSKEVPVVVDQVRS 787
            LE+W  AG   V SA+G P+  +   +E  R S+ARICVE++ D T   E+ V + +   
Sbjct: 62   LELWTDAGLVVVASAIGKPLSVDLATKERCRLSYARICVELNVDSTMPIEITVNL-RGEE 120

Query: 786  FMVPTEYNWKSPFCSCCKAFGHSTAKCAKSATELQEKPKVWVKKSTP 646
            F+VP  Y WK   C+ C +FGHS + C K   E+++  K  V K  P
Sbjct: 121  FIVPVTYEWKPRKCNLCHSFGHSQSTCPKK-IEIEDNKKEAVGKEDP 166


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