BLASTX nr result

ID: Coptis23_contig00017418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017418
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003561320.1| PREDICTED: AAA ATPase forming ring-shaped co...    86   3e-15
ref|NP_189501.2| AAA-type ATPase family protein [Arabidopsis tha...    84   9e-15
dbj|BAB02175.1| mitochondrial protein-like [Arabidopsis thaliana]      84   9e-15
ref|XP_003543646.1| PREDICTED: probable mitochondrial chaperone ...    83   3e-14
ref|XP_004152542.1| PREDICTED: probable mitochondrial chaperone ...    82   4e-14

>ref|XP_003561320.1| PREDICTED: AAA ATPase forming ring-shaped complexes-like
           [Brachypodium distachyon]
          Length = 476

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 5/101 (4%)
 Frame = -2

Query: 331 ALLRPGRMDKHINLTYCEIEAFKMLAKNYLGINKHQLMKEVEVMLPAIKMTPADIGEIFM 152
           AL+R GRMD+HI ++YC  EAFK LAKNYLG+++H L  ++E +L A K+T AD+ E  M
Sbjct: 374 ALIRHGRMDRHIEMSYCCFEAFKFLAKNYLGLDEHHLFDDIEALLQAAKITTADVAEQLM 433

Query: 151 --SCDDDAD---LGMKKVLEKMVSLKKIVDSKLHHGIQVED 44
               DDDAD     + K L   V   K+ ++K+  G +V +
Sbjct: 434 IKCADDDADSCLANLLKALALKVEENKLAETKIIKGKKVSE 474


>ref|NP_189501.2| AAA-type ATPase family protein [Arabidopsis thaliana]
           gi|332643943|gb|AEE77464.1| AAA-type ATPase family
           protein [Arabidopsis thaliana]
          Length = 477

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
 Frame = -2

Query: 331 ALLRPGRMDKHINLTYCEIEAFKMLAKNYLGINKHQLMKEVEVMLPAIKMTPADIGEIFM 152
           AL+R GRMD HI L+YC  EAFK+LAKNYL ++ H L K++E +L   K+ PAD+ E  M
Sbjct: 367 ALIRRGRMDMHIELSYCSFEAFKILAKNYLDLDTHPLFKKIESLLKETKIAPADVAENLM 426

Query: 151 --SCDDDADLGMKKVLEKMVSLKKIVDSKLHHGIQVED 44
             + + DAD  +K +++ +   KKI      HG QV++
Sbjct: 427 KKNTEIDADGSLKDLIQALEGKKKI------HGAQVDE 458


>dbj|BAB02175.1| mitochondrial protein-like [Arabidopsis thaliana]
          Length = 475

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
 Frame = -2

Query: 331 ALLRPGRMDKHINLTYCEIEAFKMLAKNYLGINKHQLMKEVEVMLPAIKMTPADIGEIFM 152
           AL+R GRMD HI L+YC  EAFK+LAKNYL ++ H L K++E +L   K+ PAD+ E  M
Sbjct: 365 ALIRRGRMDMHIELSYCSFEAFKILAKNYLDLDTHPLFKKIESLLKETKIAPADVAENLM 424

Query: 151 --SCDDDADLGMKKVLEKMVSLKKIVDSKLHHGIQVED 44
             + + DAD  +K +++ +   KKI      HG QV++
Sbjct: 425 KKNTEIDADGSLKDLIQALEGKKKI------HGAQVDE 456


>ref|XP_003543646.1| PREDICTED: probable mitochondrial chaperone BCS1-B-like [Glycine
           max]
          Length = 488

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
 Frame = -2

Query: 331 ALLRPGRMDKHINLTYCEIEAFKMLAKNYLGINKHQLMKEVEVMLPAIKMTPADIGEIFM 152
           AL+R GRMDKHI L+YC  EAFK+LA+NYLG+  HQL  ++E +L   KMTPAD+ E  M
Sbjct: 371 ALIRRGRMDKHIELSYCCYEAFKVLAQNYLGLESHQLFPKIEKLLEETKMTPADVAENLM 430

Query: 151 --SCDDDADLGMKKVLEKMVSLKKIVDSK 71
             S D++ D  +  +++ +   K  ++ K
Sbjct: 431 PKSLDEEVDTCLHNLIQALERSKVDLEKK 459


>ref|XP_004152542.1| PREDICTED: probable mitochondrial chaperone BCS1-B-like [Cucumis
           sativus] gi|449487875|ref|XP_004157844.1| PREDICTED:
           probable mitochondrial chaperone BCS1-B-like [Cucumis
           sativus]
          Length = 507

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 38/83 (45%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
 Frame = -2

Query: 331 ALLRPGRMDKHINLTYCEIEAFKMLAKNYLGINKHQLMKEVEVMLPAIKMTPADIGEIFM 152
           AL+R GRMDKHI L+YC  EAFK+LAKNYL +  H L  +++ ++  +K+TPAD+ E  M
Sbjct: 407 ALIRTGRMDKHIELSYCSFEAFKVLAKNYLNLETHLLFDQIKELIRCVKITPADVAENLM 466

Query: 151 --SCDDDADLGMKKVLEKMVSLK 89
             S +DD D  ++K+++ +  +K
Sbjct: 467 PKSPNDDPDKLLRKLIQTLEGVK 489


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