BLASTX nr result

ID: Coptis23_contig00017417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017417
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281160.2| PREDICTED: thioredoxin-related transmembrane...   309   6e-82
emb|CBI20839.3| unnamed protein product [Vitis vinifera]              309   6e-82
ref|XP_002309539.1| predicted protein [Populus trichocarpa] gi|1...   277   3e-72
ref|XP_002516513.1| conserved hypothetical protein [Ricinus comm...   270   4e-70
gb|ABK25402.1| unknown [Picea sitchensis]                             260   3e-67

>ref|XP_002281160.2| PREDICTED: thioredoxin-related transmembrane protein 2 [Vitis
           vinifera]
          Length = 262

 Score =  309 bits (792), Expect = 6e-82
 Identities = 165/271 (60%), Positives = 186/271 (68%)
 Frame = +1

Query: 85  VSEPXXXXXXXXXXXXXXXRISISQYLSPHFSTRLIHREIQSLLTFFVLTVIKLVKEETW 264
           VSEP               R S SQ LSPH   RL HREIQ++L F VL VIK+VKEETW
Sbjct: 20  VSEPYYLFHFLAFFSYFVVRSSASQVLSPHILHRLFHREIQAILAFSVLAVIKVVKEETW 79

Query: 265 EGFIADALFFAKGFLIVVTLILDFHLALCYGVGFFVIYALTQXXXXXXXXXXXXXXXXXX 444
           EGFI+D LFFAK FL+ ++LI+D+HLAL Y V F                          
Sbjct: 80  EGFISDTLFFAKVFLVAISLIMDYHLALWYIVVF-------------------------- 113

Query: 445 XXXXXXVIYALTQQPLHEGLGNSSKLTPLQLEVLLTEGKTSRFWLVEFRASWSSACTRTS 624
                 VI+ L QQP +EGLG S KLTPLQLE LLTEG TSRFWLVEFRA  S  C RTS
Sbjct: 114 -----SVIFILAQQPAYEGLGTSKKLTPLQLEALLTEGNTSRFWLVEFRALCSPTCIRTS 168

Query: 625 LYFSDLSITYSNKDLSFGIVDLGLFPNVAEKFGIFLGVNMGQLPTYILFDNGVEVERFPT 804
           L+F DLSITYSNK+LSFGIVDLGLFPNVAEKFGI +G +M QLPTYILF+N VEV RFP 
Sbjct: 169 LFFPDLSITYSNKNLSFGIVDLGLFPNVAEKFGISVGGSMAQLPTYILFENAVEVTRFPE 228

Query: 805 VDFEGKSSRPPMTKRLLCRHFELDRHLIEYI 897
           +DFE K+S PP+TK+LLCRHFELDR L+EYI
Sbjct: 229 LDFEAKASHPPITKKLLCRHFELDRRLLEYI 259


>emb|CBI20839.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score =  309 bits (792), Expect = 6e-82
 Identities = 165/271 (60%), Positives = 186/271 (68%)
 Frame = +1

Query: 85  VSEPXXXXXXXXXXXXXXXRISISQYLSPHFSTRLIHREIQSLLTFFVLTVIKLVKEETW 264
           VSEP               R S SQ LSPH   RL HREIQ++L F VL VIK+VKEETW
Sbjct: 15  VSEPYYLFHFLAFFSYFVVRSSASQVLSPHILHRLFHREIQAILAFSVLAVIKVVKEETW 74

Query: 265 EGFIADALFFAKGFLIVVTLILDFHLALCYGVGFFVIYALTQXXXXXXXXXXXXXXXXXX 444
           EGFI+D LFFAK FL+ ++LI+D+HLAL Y V F                          
Sbjct: 75  EGFISDTLFFAKVFLVAISLIMDYHLALWYIVVF-------------------------- 108

Query: 445 XXXXXXVIYALTQQPLHEGLGNSSKLTPLQLEVLLTEGKTSRFWLVEFRASWSSACTRTS 624
                 VI+ L QQP +EGLG S KLTPLQLE LLTEG TSRFWLVEFRA  S  C RTS
Sbjct: 109 -----SVIFILAQQPAYEGLGTSKKLTPLQLEALLTEGNTSRFWLVEFRALCSPTCIRTS 163

Query: 625 LYFSDLSITYSNKDLSFGIVDLGLFPNVAEKFGIFLGVNMGQLPTYILFDNGVEVERFPT 804
           L+F DLSITYSNK+LSFGIVDLGLFPNVAEKFGI +G +M QLPTYILF+N VEV RFP 
Sbjct: 164 LFFPDLSITYSNKNLSFGIVDLGLFPNVAEKFGISVGGSMAQLPTYILFENAVEVTRFPE 223

Query: 805 VDFEGKSSRPPMTKRLLCRHFELDRHLIEYI 897
           +DFE K+S PP+TK+LLCRHFELDR L+EYI
Sbjct: 224 LDFEAKASHPPITKKLLCRHFELDRRLLEYI 254


>ref|XP_002309539.1| predicted protein [Populus trichocarpa] gi|118487276|gb|ABK95466.1|
           unknown [Populus trichocarpa]
           gi|222855515|gb|EEE93062.1| predicted protein [Populus
           trichocarpa]
          Length = 247

 Score =  277 bits (708), Expect = 3e-72
 Identities = 149/272 (54%), Positives = 175/272 (64%)
 Frame = +1

Query: 85  VSEPXXXXXXXXXXXXXXXRISISQYLSPHFSTRLIHREIQSLLTFFVLTVIKLVKEETW 264
           +SEP               R S +  LSPH   RL +REIQ++L F +L   K+V++ETW
Sbjct: 6   LSEPYYLLHFLTFFSYLITRTSATSLLSPHLIHRLFYREIQAVLAFALLATYKIVRDETW 65

Query: 265 EGFIADALFFAKGFLIVVTLILDFHLALCYGVGFFVIYALTQXXXXXXXXXXXXXXXXXX 444
           E FI++ LFFAK FL+ ++LI+D+HLAL Y V F                          
Sbjct: 66  EAFISNMLFFAKIFLVAISLIMDYHLALWYMVVF-------------------------- 99

Query: 445 XXXXXXVIYALTQQPLHEGLGNSSKLTPLQLEVLLTEGKTSRFWLVEFRASWSSACTRTS 624
                 VIY +TQ P  EGLG SSKLTPLQLE LLTEG TSRFWLVEFRA  SSAC   S
Sbjct: 100 -----SVIYLITQPPAFEGLGTSSKLTPLQLETLLTEGNTSRFWLVEFRALCSSACIHAS 154

Query: 625 LYFSDLSITYSNKDLSFGIVDLGLFPNVAEKFGIFLGVNMGQLPTYILFDNGVEVERFPT 804
             F +LSITYSNK+LSFGIVDLGLFPN AEKFGI L   M QLPTYILF+N  EV RFP 
Sbjct: 155 RCFPELSITYSNKNLSFGIVDLGLFPNAAEKFGISLSGGMDQLPTYILFENATEVTRFPE 214

Query: 805 VDFEGKSSRPPMTKRLLCRHFELDRHLIEYIN 900
            D+E K+S PP+TKR+L RHFELDRHL+ Y+N
Sbjct: 215 WDYEAKASHPPVTKRVLSRHFELDRHLLGYVN 246


>ref|XP_002516513.1| conserved hypothetical protein [Ricinus communis]
           gi|223544333|gb|EEF45854.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score =  270 bits (690), Expect = 4e-70
 Identities = 150/274 (54%), Positives = 172/274 (62%)
 Frame = +1

Query: 85  VSEPXXXXXXXXXXXXXXXRISISQYLSPHFSTRLIHREIQSLLTFFVLTVIKLVKEETW 264
           VSEP               RIS S  LSP  +  L++RE Q+ L   VL  IKLVKEETW
Sbjct: 21  VSEPYYLFHFLAFFSYLVVRISSSSLLSPPIAHHLLYREFQAFLALSVLASIKLVKEETW 80

Query: 265 EGFIADALFFAKGFLIVVTLILDFHLALCYGVGFFVIYALTQXXXXXXXXXXXXXXXXXX 444
           E FIAD LF+AK  L+ V+LILD+HL L Y + F                          
Sbjct: 81  EAFIADVLFYAKLLLVAVSLILDYHLTLWYIMVF-------------------------- 114

Query: 445 XXXXXXVIYALTQQPLHEGLGNSSKLTPLQLEVLLTEGKTSRFWLVEFRASWSSACTRTS 624
                 VIY +TQQP +EGLG +SKLTPLQLE LLTEG TSRFWLVEFRA  SS C R S
Sbjct: 115 -----SVIYIVTQQPAYEGLGTASKLTPLQLETLLTEGNTSRFWLVEFRALCSSTCIRAS 169

Query: 625 LYFSDLSITYSNKDLSFGIVDLGLFPNVAEKFGIFLGVNMGQLPTYILFDNGVEVERFPT 804
             F +LSI YSNK+LSFGIVDLG+FPN AEKFGI L   M QLPTY+L +N  EV RFP 
Sbjct: 170 RCFPELSIIYSNKNLSFGIVDLGVFPNAAEKFGISLSGGMSQLPTYVLVENAAEVTRFPE 229

Query: 805 VDFEGKSSRPPMTKRLLCRHFELDRHLIEYINLK 906
            DFE KSS  P TK+LL +HFELDRHL+EY++ K
Sbjct: 230 WDFEAKSSHLPATKKLLSKHFELDRHLVEYLHGK 263


>gb|ABK25402.1| unknown [Picea sitchensis]
          Length = 259

 Score =  260 bits (665), Expect = 3e-67
 Identities = 142/272 (52%), Positives = 170/272 (62%)
 Frame = +1

Query: 85  VSEPXXXXXXXXXXXXXXXRISISQYLSPHFSTRLIHREIQSLLTFFVLTVIKLVKEETW 264
           V+EP               R S +++LS  FS  LI REIQ+LLTF VL  IK+VK +TW
Sbjct: 16  VTEPFYAFHGLTFFSYFVIRQSTAEFLSEGFSYHLIRREIQTLLTFGVLVAIKMVKSKTW 75

Query: 265 EGFIADALFFAKGFLIVVTLILDFHLALCYGVGFFVIYALTQXXXXXXXXXXXXXXXXXX 444
           E FIAD + +AKGFLI++T IL+  LA  Y V F VI+ L Q                  
Sbjct: 76  EAFIADTMLYAKGFLIMLTFILNHCLAFWYVVIFLVIFLLCQ------------------ 117

Query: 445 XXXXXXVIYALTQQPLHEGLGNSSKLTPLQLEVLLTEGKTSRFWLVEFRASWSSACTRTS 624
                        QP + G GN   LTPLQLE +LTEG TS+FWLVEFRA WSS C + S
Sbjct: 118 -------------QPPYSGQGNVKHLTPLQLETILTEGSTSQFWLVEFRALWSSRCIQAS 164

Query: 625 LYFSDLSITYSNKDLSFGIVDLGLFPNVAEKFGIFLGVNMGQLPTYILFDNGVEVERFPT 804
              SDLS+ YS ++L FG+VDLG FPN A KFGI + VNMGQLPTY+LF NGVEV R P 
Sbjct: 165 RCLSDLSLVYSTENLQFGLVDLGRFPNAAAKFGITMSVNMGQLPTYVLFKNGVEVSRIPD 224

Query: 805 VDFEGKSSRPPMTKRLLCRHFELDRHLIEYIN 900
           VDFE K++ P +TK LL RHFELD+HLIEYI+
Sbjct: 225 VDFEAKAATPTITKDLLARHFELDQHLIEYIS 256


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