BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017412
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vin...   302   9e-80
ref|XP_002520109.1| nucleic acid binding protein, putative [Rici...   289   1e-75
ref|XP_003519023.1| PREDICTED: uncharacterized protein LOC100805...   288   2e-75
gb|AFK43947.1| unknown [Lotus japonicus]                              282   1e-73
gb|AFX67041.1| RNA recognition motif containing protein [Solanum...   278   2e-72

>ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vinifera]
            gi|225425750|ref|XP_002276661.1| PREDICTED: protein vip1
            isoform 2 [Vitis vinifera]
            gi|359473262|ref|XP_003631279.1| PREDICTED: protein vip1
            [Vitis vinifera]
          Length = 246

 Score =  302 bits (774), Expect = 9e-80
 Identities = 159/243 (65%), Positives = 180/243 (74%), Gaps = 5/243 (2%)
 Frame = -2

Query: 1024 MSPTGYAAEVTGLSPNATEKDVYDFFAFSGSIEHVEIVRSG-EYACTAYVTFKDAYALEN 848
            MS +G+  EVT LSP  TEKDVYDFFAFSG+IE VE+VRS  E ACTAYVTFKDAYA+E 
Sbjct: 1    MSTSGHTIEVTSLSPKVTEKDVYDFFAFSGAIERVEMVRSADECACTAYVTFKDAYAVET 60

Query: 847  AVLLSGATIIDQRVCITRWGQYEDEFDIWNRSSWKIEEETGSSHGVNGNPSIPTAGEAV- 671
            AVLLSGATI+DQRVCITRWG YEDEFD+WNR +WK+E+ET S+H    N S P AGEAV 
Sbjct: 61   AVLLSGATIVDQRVCITRWGHYEDEFDLWNRPTWKLEDETSSTHAPETNRSYPDAGEAVT 120

Query: 670  ---EIVKSMLSKGYVLGKDALSKAKALDESHQVSATAAEKVSEMSKRIGFTDKISAGVGA 500
               E+VK+ML+KGY+LGKDALSKAK  DESHQ SATA   V+E+S+RIG TDK  AGV A
Sbjct: 121  MAQEVVKTMLAKGYILGKDALSKAKTFDESHQFSATAVATVAELSQRIGLTDKFCAGVEA 180

Query: 499  VMSVDEKYGVSETTKSAVSATGRTXXXXXXXXXXXSYFSMGALWVSXXXXXXXXXXXXLG 320
              SVD++Y +SE TKSAVSATGRT           SYFS GALWVS            LG
Sbjct: 181  AKSVDQRYHISEITKSAVSATGRTAAAAATTVVNSSYFSKGALWVSDALSRAAKAAGDLG 240

Query: 319  SHG 311
            SHG
Sbjct: 241  SHG 243


>ref|XP_002520109.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223540601|gb|EEF42164.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 245

 Score =  289 bits (739), Expect = 1e-75
 Identities = 147/225 (65%), Positives = 177/225 (78%), Gaps = 4/225 (1%)
 Frame = -2

Query: 1024 MSPTGYAAEVTGLSPNATEKDVYDFFAFSGSIEHVEIVRSGEYACTAYVTFKDAYALENA 845
            M   G+A EVTGLSP+ TEKD+YDFF+FSGSIEHVEIVR G+YACTAYVTFK+AY+ E A
Sbjct: 1    MDQDGHAVEVTGLSPSTTEKDLYDFFSFSGSIEHVEIVRCGDYACTAYVTFKNAYSQETA 60

Query: 844  VLLSGATIIDQRVCITRWGQYEDEFDIWNRSSWKIEEETGSSHGVNGNPSIPTAGEAV-- 671
            VLLSGATI+++RVCITRWG Y DEFD+WN  S ++E+E  S+H    +  +P+AGEAV  
Sbjct: 61   VLLSGATILEERVCITRWGHYIDEFDLWNTPSLRVEDERESTHPPERSQYVPSAGEAVIM 120

Query: 670  --EIVKSMLSKGYVLGKDALSKAKALDESHQVSATAAEKVSEMSKRIGFTDKISAGVGAV 497
              E+VK+M++KGYVLGKD LSKAKA DESHQV+ATAA KV+E ++RIG  DKI AG+ A+
Sbjct: 121  AQEVVKNMVAKGYVLGKDTLSKAKAFDESHQVTATAAAKVAEFTERIGLADKIFAGMEAM 180

Query: 496  MSVDEKYGVSETTKSAVSATGRTXXXXXXXXXXXSYFSMGALWVS 362
             SVD+KY VS+ TKSAVSATGRT           SYFS GALWVS
Sbjct: 181  KSVDQKYHVSDMTKSAVSATGRTAVAAASTVVNSSYFSKGALWVS 225


>ref|XP_003519023.1| PREDICTED: uncharacterized protein LOC100805907 [Glycine max]
          Length = 244

 Score =  288 bits (736), Expect = 2e-75
 Identities = 152/241 (63%), Positives = 178/241 (73%), Gaps = 4/241 (1%)
 Frame = -2

Query: 1024 MSPTGYAAEVTGLSPNATEKDVYDFFAFSGSIEHVEIVRSGEYACTAYVTFKDAYALENA 845
            M+  GYA EVTGLSP AT+KDV DFFAFSG IE+VEI+RSG+YACTAYVTFKDAYA E A
Sbjct: 1    MNSGGYAVEVTGLSPKATDKDVRDFFAFSGVIENVEIIRSGDYACTAYVTFKDAYAQETA 60

Query: 844  VLLSGATIIDQRVCITRWGQYEDEFDIWNRSSWKIEEETGSSHGVNGNPSIPTAGEAV-- 671
             LLSGATI+DQRVCITRWG YEDEFD WN+ S+  E+ET S+     N  + +AGEAV  
Sbjct: 61   CLLSGATILDQRVCITRWGHYEDEFDFWNQPSYSHEDETAST-TPQSNQFVSSAGEAVTM 119

Query: 670  --EIVKSMLSKGYVLGKDALSKAKALDESHQVSATAAEKVSEMSKRIGFTDKISAGVGAV 497
              E+V++MLSKGYVL KDAL+KAK  DESHQVSATA  KVSE+S+RIG +DKISAG+GAV
Sbjct: 120  AQEVVRTMLSKGYVLSKDALAKAKDFDESHQVSATATAKVSELSQRIGLSDKISAGIGAV 179

Query: 496  MSVDEKYGVSETTKSAVSATGRTXXXXXXXXXXXSYFSMGALWVSXXXXXXXXXXXXLGS 317
             SVD++Y VSETT +A S  GR+           SYFS GALWVS            +G+
Sbjct: 180  KSVDQRYNVSETTMAAASTAGRSVAAAANSLVNSSYFSKGALWVSGALTRAAQVASDMGT 239

Query: 316  H 314
            H
Sbjct: 240  H 240


>gb|AFK43947.1| unknown [Lotus japonicus]
          Length = 245

 Score =  282 bits (722), Expect = 1e-73
 Identities = 149/240 (62%), Positives = 177/240 (73%), Gaps = 4/240 (1%)
 Frame = -2

Query: 1012 GYAAEVTGLSPNATEKDVYDFFAFSGSIEHVEIVRSGEYACTAYVTFKDAYALENAVLLS 833
            GY  EVTGLSPNATEKDV+DFF+FSG+I+HVEI+RSG+YACTAYVTFKDAY+ E A LLS
Sbjct: 6    GYTVEVTGLSPNATEKDVHDFFSFSGAIQHVEIIRSGDYACTAYVTFKDAYSQETACLLS 65

Query: 832  GATIIDQRVCITRWGQYEDEFDIWNRSSWKIEEETGSSHGVNGNPSIPTAGEAV----EI 665
            GATI+DQRVCITRWG YED +D WNR S+  EEE  +S   + N  + +AGEAV    E+
Sbjct: 66   GATILDQRVCITRWGNYEDAYDFWNRPSYSHEEER-TSTTPHSNQFVSSAGEAVTVAQEV 124

Query: 664  VKSMLSKGYVLGKDALSKAKALDESHQVSATAAEKVSEMSKRIGFTDKISAGVGAVMSVD 485
            VK+ML+KGYVL KDAL+KAK  DESHQVSATA  KVSE+S+RIG ++K+SAGV AV  VD
Sbjct: 125  VKTMLAKGYVLSKDALTKAKDFDESHQVSATATAKVSELSRRIGLSEKVSAGVKAVKYVD 184

Query: 484  EKYGVSETTKSAVSATGRTXXXXXXXXXXXSYFSMGALWVSXXXXXXXXXXXXLGSHGSK 305
            + Y VS TTK+A SATGR+           SYFS GALWVS            LG+ G +
Sbjct: 185  QMYNVSGTTKAAASATGRSVASATSTVVNNSYFSKGALWVSGALTRAAQVTSDLGTRGGR 244


>gb|AFX67041.1| RNA recognition motif containing protein [Solanum tuberosum]
          Length = 245

 Score =  278 bits (710), Expect = 2e-72
 Identities = 145/242 (59%), Positives = 175/242 (72%), Gaps = 4/242 (1%)
 Frame = -2

Query: 1024 MSPTGYAAEVTGLSPNATEKDVYDFFAFSGSIEHVEIVRSGEYACTAYVTFKDAYALENA 845
            M+P GY AEVTGLSP ATEKDV +FF F G+IEHVEIVR+GE+A TAYVTF++ +ALE A
Sbjct: 1    MNPGGYTAEVTGLSPTATEKDVQEFFGFCGAIEHVEIVRAGEHASTAYVTFRNPHALETA 60

Query: 844  VLLSGATIIDQRVCITRWGQYEDEFDIWNRSSWKIEEETGSSHGVNGNPSIPTAGEAV-- 671
            VLLSGA I+DQRVCIT WG Y+DEFD WN SSWK +E+  SS    G+  + +AGEAV  
Sbjct: 61   VLLSGAAILDQRVCITSWGHYQDEFDYWNHSSWKPQEDCYSSQDSQGHYFVSSAGEAVTL 120

Query: 670  --EIVKSMLSKGYVLGKDALSKAKALDESHQVSATAAEKVSEMSKRIGFTDKISAGVGAV 497
              ++VK+MLS+GYVLGK AL KAKA DESH +SATA  KV+++S+RIG TDK  AGV   
Sbjct: 121  TQDVVKTMLSQGYVLGKGALGKAKAFDESHGLSATAVSKVADLSERIGLTDKFCAGVEVA 180

Query: 496  MSVDEKYGVSETTKSAVSATGRTXXXXXXXXXXXSYFSMGALWVSXXXXXXXXXXXXLGS 317
             SVD++Y +S+TT+SAVSATGRT           SYFS GALW+S            LGS
Sbjct: 181  RSVDQRYHISDTTRSAVSATGRTAISAATAVVNSSYFSKGALWMSGALSKAAQAAADLGS 240

Query: 316  HG 311
             G
Sbjct: 241  RG 242