BLASTX nr result

ID: Coptis23_contig00017406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017406
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263494.1| PREDICTED: uncharacterized protein LOC100256...   432   e-118
emb|CAN72960.1| hypothetical protein VITISV_008500 [Vitis vinifera]   429   e-118
ref|XP_002527493.1| conserved hypothetical protein [Ricinus comm...   412   e-113
emb|CAN71564.1| hypothetical protein VITISV_007567 [Vitis vinifera]   407   e-111
ref|XP_002313901.1| predicted protein [Populus trichocarpa] gi|2...   402   e-109

>ref|XP_002263494.1| PREDICTED: uncharacterized protein LOC100256708 [Vitis vinifera]
          Length = 354

 Score =  432 bits (1110), Expect = e-118
 Identities = 216/351 (61%), Positives = 270/351 (76%)
 Frame = +1

Query: 70   KHLLRIDTMELKAQIVKKIGHQRADKYFLHLSRFFSMKITKSEFDKICVRTIGKENVSLH 249
            ++  RIDT+ELKA IV++IG Q+A+KYF  L R FS+K++K EFDK C+ TIG+EN+ LH
Sbjct: 5    QNFTRIDTLELKALIVRRIGRQKAEKYFDQLKRLFSLKLSKREFDKFCLWTIGRENIPLH 64

Query: 250  NRLVQAIIKNACLAKSAPTKGSKVEGPLNVKVANGYHKSSPPSLSGDAFPPSPRKVRSSF 429
            NRL+ +I+KNACL+K  P KG  V  P +VKVANGY ++   SL GDAFPPSPRK RS  
Sbjct: 65   NRLIGSILKNACLSKVPPLKGRNVGVPKDVKVANGYQRNCLQSLYGDAFPPSPRKGRSQV 124

Query: 430  IRDRKFRDRPSPLGPNGKVNSVVCDESAAKVLEQQSATELLSLGSRPPIEVFSVEDGEEV 609
             RDR+FRDR SPLGP GK  SV C+E A+K  EQQSATELLSLGSRPP EV SVEDGEEV
Sbjct: 125  NRDRRFRDRLSPLGPLGKPQSVACEELASKAQEQQSATELLSLGSRPPGEVVSVEDGEEV 184

Query: 610  EQMMGSPSIQSRSPLRAPLGVSTHLGGARKALRSSFLTSFNMDTCRNSYELPDTRSLRKR 789
            EQ+ GSPS+QSRSP+RAP G+S ++GG RK+L +  + +++ +TC NS ELPDT SLR  
Sbjct: 185  EQLAGSPSVQSRSPVRAPFGISMNMGG-RKSLCNGSICNYHPETCHNSGELPDTGSLRSH 243

Query: 790  LEQKLEKEGLGITMDCVNLLNNGLDAYLKRLIKPCMELAGTRCSQEHQAQGNDQVIHVLN 969
            LE+KLE EG G++MDCVNLLNN LD +LKRLI+PC++L G+RC  EH  Q N Q +  +N
Sbjct: 244  LERKLEMEGFGVSMDCVNLLNNSLDVFLKRLIEPCLQLVGSRCGNEHLRQLNAQTLPGMN 303

Query: 970  GMWSERDVQRTTKPVSASLLDFRVAMELNPQLLGEDWRVQRERICLRTLEE 1122
             +   R +Q++ KP  AS+LDFRVAMELNPQ+LGEDW +Q E+ICL   EE
Sbjct: 304  RILPGRYIQKSRKPKYASVLDFRVAMELNPQILGEDWPIQLEKICLHASEE 354


>emb|CAN72960.1| hypothetical protein VITISV_008500 [Vitis vinifera]
          Length = 354

 Score =  429 bits (1104), Expect = e-118
 Identities = 216/351 (61%), Positives = 269/351 (76%)
 Frame = +1

Query: 70   KHLLRIDTMELKAQIVKKIGHQRADKYFLHLSRFFSMKITKSEFDKICVRTIGKENVSLH 249
            ++  RIDT+ELKA IV++IG Q+A+KYF  L R FS+K++K EFDK C+ TIG+EN+ LH
Sbjct: 5    QNFTRIDTLELKALIVRRIGRQKAEKYFDQLKRLFSLKLSKREFDKFCLWTIGRENIPLH 64

Query: 250  NRLVQAIIKNACLAKSAPTKGSKVEGPLNVKVANGYHKSSPPSLSGDAFPPSPRKVRSSF 429
            NRL+ +I+KNACL+K  P KG  V  P +VKVANGY ++   SL GDAFPPSPRK RS  
Sbjct: 65   NRLIGSILKNACLSKVPPLKGRNVGVPKDVKVANGYQRNCLQSLYGDAFPPSPRKGRSQV 124

Query: 430  IRDRKFRDRPSPLGPNGKVNSVVCDESAAKVLEQQSATELLSLGSRPPIEVFSVEDGEEV 609
             RDR+FRDR SPLGP GK  SV C+E A+K  EQQSATELLSLGSRPP EV SVEDGEEV
Sbjct: 125  NRDRRFRDRLSPLGPLGKPQSVACEELASKAQEQQSATELLSLGSRPPGEVVSVEDGEEV 184

Query: 610  EQMMGSPSIQSRSPLRAPLGVSTHLGGARKALRSSFLTSFNMDTCRNSYELPDTRSLRKR 789
            EQ+ GSPS+QSRSP+RAP G+S ++GG RK+L +  + +++ +TC NS ELPDT SLR  
Sbjct: 185  EQLAGSPSVQSRSPVRAPFGISMNMGG-RKSLCNGSVCNYHPETCHNSGELPDTGSLRSH 243

Query: 790  LEQKLEKEGLGITMDCVNLLNNGLDAYLKRLIKPCMELAGTRCSQEHQAQGNDQVIHVLN 969
            LE+KLE EG  ++MDCVNLLNN LD +LKRLI+PC++L G+RC  EH  Q N Q +  +N
Sbjct: 244  LERKLEMEGFSVSMDCVNLLNNSLDVFLKRLIEPCLQLVGSRCGNEHLRQLNAQTLPGMN 303

Query: 970  GMWSERDVQRTTKPVSASLLDFRVAMELNPQLLGEDWRVQRERICLRTLEE 1122
             +   R +Q++ KP  AS+LDFRVAMELNPQ+LGEDW VQ E+ICL   EE
Sbjct: 304  RILPGRYIQKSRKPKYASVLDFRVAMELNPQILGEDWPVQLEKICLHASEE 354


>ref|XP_002527493.1| conserved hypothetical protein [Ricinus communis]
            gi|223533133|gb|EEF34891.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 357

 Score =  412 bits (1059), Expect = e-113
 Identities = 213/349 (61%), Positives = 263/349 (75%), Gaps = 2/349 (0%)
 Frame = +1

Query: 82   RIDTMELKAQIVKKIGHQRADKYFLHLSRFFSMKITKSEFDKICVRTIGKENVSLHNRLV 261
            RI+T+ELKA +VKKIGH+RADKYF  L+R F++K+ K EFDK+CVR IG+ENV LHNRL+
Sbjct: 9    RINTLELKALLVKKIGHERADKYFDQLTRLFTLKVAKCEFDKLCVRIIGRENVPLHNRLI 68

Query: 262  QAIIKNACLAKSAPTKGSK-VEGPLNVKVANGYHKSSPPSLSGDAFPPSPRKVRSSFIRD 438
            ++I+KNACLA   P KG K V   LNV+ ANGY ++   SL GDAFPPSPRK RS   RD
Sbjct: 69   RSIVKNACLANVPPPKGIKRVGSSLNVRTANGYQRNCLQSLYGDAFPPSPRKGRSPVNRD 128

Query: 439  RKFRDRPSPLGPNGKVNSVVCDESAAKVLEQQSATELLSLGSRPPIEVFSVEDGEEVEQM 618
            RKFRDRPSPLGP GK  S+VC+E  ++  EQQSATELLSLGSRPP EV SVE+GEEVEQ 
Sbjct: 129  RKFRDRPSPLGPLGKPQSMVCEELNSRAQEQQSATELLSLGSRPPAEVASVEEGEEVEQA 188

Query: 619  MGSPSIQSRSPLRAPLGVSTHLGGARKALRS-SFLTSFNMDTCRNSYELPDTRSLRKRLE 795
             GSP +QSRSP+ APLGVS +LGGARKA+ + S  +S   +TC +S  LPDTRSLR RLE
Sbjct: 189  AGSPCVQSRSPVTAPLGVSMNLGGARKAISNVSICSSHLRETCLSSGMLPDTRSLRSRLE 248

Query: 796  QKLEKEGLGITMDCVNLLNNGLDAYLKRLIKPCMELAGTRCSQEHQAQGNDQVIHVLNGM 975
            +KLE E L +++DCVNLLNN LD+YLK+LI+PCM LA +RC ++H  + +DQ     N +
Sbjct: 249  RKLEMEDLSVSVDCVNLLNNALDSYLKKLIEPCMGLASSRCGRDHLRKDSDQFAPGSNEI 308

Query: 976  WSERDVQRTTKPVSASLLDFRVAMELNPQLLGEDWRVQRERICLRTLEE 1122
               R +QR T+ V AS+LDF  AM++NPQ+LG DW    E+I L   EE
Sbjct: 309  LPGRYMQRPTESVYASMLDFHAAMQVNPQILGGDWATSLEKISLGAFEE 357


>emb|CAN71564.1| hypothetical protein VITISV_007567 [Vitis vinifera]
          Length = 355

 Score =  407 bits (1047), Expect = e-111
 Identities = 205/351 (58%), Positives = 263/351 (74%)
 Frame = +1

Query: 70   KHLLRIDTMELKAQIVKKIGHQRADKYFLHLSRFFSMKITKSEFDKICVRTIGKENVSLH 249
            ++  RI T+ELK QI KK+G  +A+KYF  L+++ S+K++K+EF+K+C+ TIG+ENV LH
Sbjct: 5    RNFSRIHTLELKIQIEKKLGRAKAEKYFDLLTKYLSLKLSKNEFNKLCIDTIGRENVLLH 64

Query: 250  NRLVQAIIKNACLAKSAPTKGSKVEGPLNVKVANGYHKSSPPSLSGDAFPPSPRKVRSSF 429
            N+L+ +IIKNACL+KS P K SK EG LNVKVANGY +SS  S+  D FP SPRK R+  
Sbjct: 65   NQLIGSIIKNACLSKSPPPKQSKTEGSLNVKVANGYQRSSLQSICRDVFPQSPRKGRTPS 124

Query: 430  IRDRKFRDRPSPLGPNGKVNSVVCDESAAKVLEQQSATELLSLGSRPPIEVFSVEDGEEV 609
            +RDRKFRDRPSPLGP+GK +SVVC+++  K+ EQQSATELLSLGSRPP EV SVEDGEEV
Sbjct: 125  LRDRKFRDRPSPLGPHGKNHSVVCEDTVPKIQEQQSATELLSLGSRPPGEVNSVEDGEEV 184

Query: 610  EQMMGSPSIQSRSPLRAPLGVSTHLGGARKALRSSFLTSFNMDTCRNSYELPDTRSLRKR 789
            EQ   SP I SRSP+ APLG+       RK L +   ++F +++C+   ELPDT SLR R
Sbjct: 185  EQAARSPGIHSRSPVTAPLGIPKTTXVTRKVLCNEAPSAFQIESCQIMGELPDTHSLRNR 244

Query: 790  LEQKLEKEGLGITMDCVNLLNNGLDAYLKRLIKPCMELAGTRCSQEHQAQGNDQVIHVLN 969
            LEQKLE EG  I+ DC++LLNNGLD +LKRLIKPC+ELA +R  Q+H +Q +  V+    
Sbjct: 245  LEQKLEMEGFKISGDCISLLNNGLDVFLKRLIKPCLELASSRSGQKHLSQKHGHVVSGPK 304

Query: 970  GMWSERDVQRTTKPVSASLLDFRVAMELNPQLLGEDWRVQRERICLRTLEE 1122
            GMW  R VQ+    + AS+LDFRVAM+LNP +LGEDW V+ E++CLR   E
Sbjct: 305  GMWPVRYVQKPAGSIPASILDFRVAMDLNPYILGEDWPVKLEKVCLRASGE 355


>ref|XP_002313901.1| predicted protein [Populus trichocarpa] gi|222850309|gb|EEE87856.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  402 bits (1032), Expect = e-109
 Identities = 214/348 (61%), Positives = 262/348 (75%), Gaps = 1/348 (0%)
 Frame = +1

Query: 79   LRIDTMELKAQIVKKIGHQRADKYFLHLSRFFSMKITKSEFDKICVRTIGKENVSLHNRL 258
            +RI+T+ELK+ IVKKIG QRADKYF  L+   ++KITK EFDK  V  IG+EN+ LHNR 
Sbjct: 9    MRINTLELKSLIVKKIGRQRADKYFYQLTGLLNLKITKCEFDKFFVGIIGRENIPLHNRF 68

Query: 259  VQAIIKNACLAKSAPTKGSKVEGPLNVKVANGYHKSSPPSLSGDAFPPSPRKVRSSFIRD 438
            +Q+I+KN C +K  P+K +K  G  N+ V NGY K+S  SL GDAFP SPRK RS   RD
Sbjct: 69   IQSILKNPCCSKVPPSKSAKRAGS-NLTVTNGYQKNSLQSLYGDAFPSSPRKGRSPVNRD 127

Query: 439  RKFRDRPSPLGPNGKVNSVVCDESAAKVLEQQSATELLSLGSRPPIEVFSVEDGEEVEQM 618
             KFRDRPSPLGP GK  SV C+E  A+  EQQSATELLSLGSRPP+EV SVEDGEEV+QM
Sbjct: 128  CKFRDRPSPLGPLGKPQSVECEELNARGQEQQSATELLSLGSRPPVEVASVEDGEEVDQM 187

Query: 619  MGSPSIQSRSPLRAPLGVSTHLGGARKALRSSFLTSFNMD-TCRNSYELPDTRSLRKRLE 795
             GSPS+QSRSP+ APLG+S +  G+RKAL ++ L + ++  TC NS ELPDTRSLR RLE
Sbjct: 188  AGSPSVQSRSPVTAPLGISMNF-GSRKALSNASLCNNHLKRTCLNSGELPDTRSLRSRLE 246

Query: 796  QKLEKEGLGITMDCVNLLNNGLDAYLKRLIKPCMELAGTRCSQEHQAQGNDQVIHVLNGM 975
            QKLE EG+  ++DCVNLLNNGLDAYLKRLI+PCM LAG+R  +E+  + + Q I  LN M
Sbjct: 247  QKLEMEGISASLDCVNLLNNGLDAYLKRLIEPCMALAGSRHGKEYLKKASGQFIPGLNEM 306

Query: 976  WSERDVQRTTKPVSASLLDFRVAMELNPQLLGEDWRVQRERICLRTLE 1119
               + +QR TK + AS+LDFRV+ME NPQ+LGEDW  Q E+I L+  E
Sbjct: 307  LPGKYMQRETKSIYASMLDFRVSMESNPQILGEDWPTQLEKISLQGFE 354


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