BLASTX nr result

ID: Coptis23_contig00017389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017389
         (1408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532062.1| Glucan endo-1,3-beta-glucosidase precursor, ...   338   3e-90
ref|XP_002283548.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   333   5e-89
ref|XP_002297638.1| predicted protein [Populus trichocarpa] gi|2...   330   5e-88
gb|AFK45712.1| unknown [Lotus japonicus]                              319   1e-84
emb|CAN72077.1| hypothetical protein VITISV_020314 [Vitis vinifera]   312   1e-82

>ref|XP_002532062.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus
            communis] gi|223528266|gb|EEF30317.1| Glucan
            endo-1,3-beta-glucosidase precursor, putative [Ricinus
            communis]
          Length = 436

 Score =  338 bits (866), Expect = 3e-90
 Identities = 162/255 (63%), Positives = 193/255 (75%), Gaps = 1/255 (0%)
 Frame = -3

Query: 1406 MFDAMVDAAYYSMVALNFSGIPVVVTESGWPWLGGTNEPAATIENAEAYNNNLIRRVLNN 1227
            MFDAMVDA YY++ A N +GIP+VVTE+GWPWLGG NEP AT  NAE +NNNLIRRVLN+
Sbjct: 180  MFDAMVDATYYAIDAFNSTGIPIVVTETGWPWLGGANEPDATANNAETFNNNLIRRVLND 239

Query: 1226 SGPPSQPSIPVSTYIYELFNEDSRPGPVSKKNWGMLYTNGTAVYPFRLNYSGIISGNSSK 1047
            SGPPSQP+IP+STYIYELFNED RPGPVS++NWG+ +TNGTAVY   L+ S  I+GNSS 
Sbjct: 240  SGPPSQPTIPISTYIYELFNEDKRPGPVSERNWGLYFTNGTAVYSLSLSASDRITGNSS- 298

Query: 1046 GVFCTAKEDADPSSLEAGLDWACGPGKANCDAIQEGRPCYEPDTLPNHASFAYNDYYHKM 867
             VFC AK++AD + L+ GL+WACG G ANC AIQEGRPCY P+ + NHAS+AYNDYY KM
Sbjct: 299  SVFCVAKQNADSAKLQEGLNWACGQGGANCTAIQEGRPCYAPNNIQNHASYAYNDYYQKM 358

Query: 866  QSAGGTCDFGGTAMFTDVDPSHGSCVFAXXXXXXXXGAITPFSAFGPVSPE-TARSTTMQ 690
             SAGGTCDF G+A  T VDPS+GSC+F         G I P  AFGP+SP+  + S   Q
Sbjct: 359  HSAGGTCDFDGSATTTTVDPSYGSCIFTGSSNSSTSGGIFPPVAFGPISPQGGSTSLRFQ 418

Query: 689  VSEVAFLIPAILFLF 645
             S+V  L+ A    F
Sbjct: 419  ASKVQSLLSAAFLAF 433


>ref|XP_002283548.1| PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Vitis vinifera]
          Length = 676

 Score =  333 bits (855), Expect = 5e-89
 Identities = 162/253 (64%), Positives = 190/253 (75%)
 Frame = -3

Query: 1406 MFDAMVDAAYYSMVALNFSGIPVVVTESGWPWLGGTNEPAATIENAEAYNNNLIRRVLNN 1227
            M DAMVDAAYYS+ A NFS +PVVVTESGWPWLGG NEP AT+ENAE +N+NLIRRVLNN
Sbjct: 240  MLDAMVDAAYYSVQAFNFSVVPVVVTESGWPWLGGANEPDATVENAETFNSNLIRRVLNN 299

Query: 1226 SGPPSQPSIPVSTYIYELFNEDSRPGPVSKKNWGMLYTNGTAVYPFRLNYSGIISGNSSK 1047
            SGPPSQP IP++TYIYEL NED R GPVS++NWG+  TNGTAVYP   + S   +GNSS 
Sbjct: 300  SGPPSQPDIPINTYIYELLNEDKRSGPVSERNWGVFLTNGTAVYPLSWSTSLQATGNSST 359

Query: 1046 GVFCTAKEDADPSSLEAGLDWACGPGKANCDAIQEGRPCYEPDTLPNHASFAYNDYYHKM 867
             VFC AKE AD   LE GL+WACG  + NC AIQEG+PCY P+T  NHAS+AYNDYY KM
Sbjct: 360  -VFCVAKEGADSDDLEKGLNWACGQSQVNCTAIQEGQPCYSPNTYQNHASYAYNDYYQKM 418

Query: 866  QSAGGTCDFGGTAMFTDVDPSHGSCVFAXXXXXXXXGAITPFSAFGPVSPETARSTTMQV 687
            +S GGTCDF GTA  T  DPS+GSC+F+        G  +P SAF P S  ++RS T+QV
Sbjct: 419  RSGGGTCDFRGTATTTTADPSYGSCIFSGSSNSSSSGGTSPSSAFAPES-LSSRSPTLQV 477

Query: 686  SEVAFLIPAILFL 648
              +  LIPA+L +
Sbjct: 478  PRLGVLIPAMLLI 490


>ref|XP_002297638.1| predicted protein [Populus trichocarpa] gi|222844896|gb|EEE82443.1|
            predicted protein [Populus trichocarpa]
          Length = 461

 Score =  330 bits (846), Expect = 5e-88
 Identities = 160/253 (63%), Positives = 192/253 (75%), Gaps = 3/253 (1%)
 Frame = -3

Query: 1406 MFDAMVDAAYYSMVALNFSGIPVVVTESGWPWLGGTNEPAATIENAEAYNNNLIRRVLNN 1227
            MFDA+VDA YYS+ ALN SGI +VVTE+GWPWLGG NEP AT ENAE +N+NLIRRVLN+
Sbjct: 204  MFDALVDATYYSIEALNMSGISIVVTETGWPWLGGANEPDATAENAETFNSNLIRRVLND 263

Query: 1226 SGPPSQPSIPVSTYIYELFNEDSRPGPVSKKNWGMLYTNGTAVYPFRLNYSGIISGNSSK 1047
            SGPPSQP +P++TYIYELFNED RPGPVS+KNWG+ +TNG+AVY F L+ S  I+GN+S 
Sbjct: 264  SGPPSQPKVPINTYIYELFNEDKRPGPVSEKNWGLFFTNGSAVYTFSLSTSNQITGNNSD 323

Query: 1046 GVFCTAKEDADPSSLEAGLDWACGPGKANCDAIQEGRPCYEPDTLPNHASFAYNDYYHKM 867
              FC AK +ADP  L+AGLDWACG G ANCDAIQEG+PCY P+T  NHAS+AYNDYY K 
Sbjct: 324  --FCVAKPNADPGKLQAGLDWACGQGGANCDAIQEGKPCYLPNTYQNHASYAYNDYYKKK 381

Query: 866  QSAGGTCDFGGTAMFTDVDPSHGSCVF--AXXXXXXXXGAITPFSAFGPVSPETARST-T 696
            +S G TCDF GTA  T VDPS+GSC F  +        G  T   A GPV+P+   +T  
Sbjct: 382  RSVGATCDFDGTAATTTVDPSYGSCKFTGSSTITPNSNGGFTTTVAPGPVTPQGGSATVN 441

Query: 695  MQVSEVAFLIPAI 657
            + VS++ FLI A+
Sbjct: 442  LPVSKIQFLISAV 454


>gb|AFK45712.1| unknown [Lotus japonicus]
          Length = 336

 Score =  319 bits (817), Expect = 1e-84
 Identities = 155/254 (61%), Positives = 188/254 (74%)
 Frame = -3

Query: 1406 MFDAMVDAAYYSMVALNFSGIPVVVTESGWPWLGGTNEPAATIENAEAYNNNLIRRVLNN 1227
            MFDAMVDA YYS+ ALNF GIP+VVTE+GWP  GG NEP AT +NAE Y+NN+IRRV+N+
Sbjct: 82   MFDAMVDATYYSIDALNFKGIPIVVTETGWPSFGGANEPDATEKNAETYSNNMIRRVMND 141

Query: 1226 SGPPSQPSIPVSTYIYELFNEDSRPGPVSKKNWGMLYTNGTAVYPFRLNYSGIISGNSSK 1047
            SGPPSQPSIP++TYIYELFNED R GP+S+KNWG+ YTNG+AVYP   +  G ++GNSS 
Sbjct: 142  SGPPSQPSIPINTYIYELFNEDKRNGPISEKNWGIFYTNGSAVYPLSFSAFGQVTGNSS- 200

Query: 1046 GVFCTAKEDADPSSLEAGLDWACGPGKANCDAIQEGRPCYEPDTLPNHASFAYNDYYHKM 867
             +FC AK+ AD   L+ GL WACG G ANC AIQ+G+PCY P+ L +HAS+AYNDYY K 
Sbjct: 201  AIFCVAKDGADADELQTGLSWACGQGGANCAAIQQGQPCYLPNDLKSHASYAYNDYYQKK 260

Query: 866  QSAGGTCDFGGTAMFTDVDPSHGSCVFAXXXXXXXXGAITPFSAFGPVSPETARSTTMQV 687
             +AGGTCDF GTA  T  DPSHGSC+F+        G   P +A GP SP  A S  +QV
Sbjct: 261  NNAGGTCDFDGTAEVTTQDPSHGSCIFS--GSSNPGGVSLPPTALGPSSPFGA-SMNLQV 317

Query: 686  SEVAFLIPAILFLF 645
            + + +LI AI   F
Sbjct: 318  TSLQYLISAIAVFF 331


>emb|CAN72077.1| hypothetical protein VITISV_020314 [Vitis vinifera]
          Length = 473

 Score =  312 bits (800), Expect = 1e-82
 Identities = 145/208 (69%), Positives = 166/208 (79%)
 Frame = -3

Query: 1406 MFDAMVDAAYYSMVALNFSGIPVVVTESGWPWLGGTNEPAATIENAEAYNNNLIRRVLNN 1227
            M DAMVDAAYYS+ A NFS +PVVVTESGWPWLGG NEP AT+ENAE +N+NLIRRVLNN
Sbjct: 240  MLDAMVDAAYYSVQAFNFSVVPVVVTESGWPWLGGANEPDATVENAETFNSNLIRRVLNN 299

Query: 1226 SGPPSQPSIPVSTYIYELFNEDSRPGPVSKKNWGMLYTNGTAVYPFRLNYSGIISGNSSK 1047
            SGPPSQP IP++TYIYEL NED R GPVS++NWG+  TNGTAVYP   + S   +GNSS 
Sbjct: 300  SGPPSQPDIPINTYIYELLNEDKRSGPVSERNWGVFLTNGTAVYPLSWSTSLQATGNSST 359

Query: 1046 GVFCTAKEDADPSSLEAGLDWACGPGKANCDAIQEGRPCYEPDTLPNHASFAYNDYYHKM 867
             VFC AKE AD   LE GL+WACG  + NC AIQEG+PCY P+T  NHAS+AYNDYY KM
Sbjct: 360  -VFCVAKEGADSDDLEKGLNWACGQSQVNCTAIQEGQPCYSPNTYQNHASYAYNDYYQKM 418

Query: 866  QSAGGTCDFGGTAMFTDVDPSHGSCVFA 783
            +S GGTCDF GTA  T  DPS+GSC+F+
Sbjct: 419  RSGGGTCDFRGTATTTTADPSYGSCIFS 446


Top