BLASTX nr result

ID: Coptis23_contig00017388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017388
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinife...    77   2e-12
ref|XP_002279115.2| PREDICTED: protein argonaute 4A-like [Vitis ...    76   4e-12
emb|CBI32885.3| unnamed protein product [Vitis vinifera]               76   4e-12
ref|NP_197602.2| PAZ and piwi domain-containing protein [Arabido...    75   6e-12
ref|XP_002527764.1| eukaryotic translation initiation factor 2c,...    75   6e-12

>ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinifera]
           gi|296083994|emb|CBI24382.3| unnamed protein product
           [Vitis vinifera]
          Length = 913

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/44 (79%), Positives = 42/44 (95%)
 Frame = +1

Query: 1   VVSSREWPLVSRYRASIRAQSPKVEMIDSLFKPISESKDEGIIR 132
           VVSSR+WPL+SRYRAS+R QSPKVEMIDSL+K +SE++DEGIIR
Sbjct: 665 VVSSRQWPLISRYRASVRTQSPKVEMIDSLYKRVSETEDEGIIR 708


>ref|XP_002279115.2| PREDICTED: protein argonaute 4A-like [Vitis vinifera]
          Length = 866

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = +1

Query: 1   VVSSREWPLVSRYRASIRAQSPKVEMIDSLFKPISESKDEGIIR 132
           VVSSR WPL+SRYRAS+R QSPKVEMIDSLFKP+S+ KD GI+R
Sbjct: 618 VVSSRCWPLISRYRASVRTQSPKVEMIDSLFKPVSDDKDLGIVR 661



 Score = 43.1 bits (100), Expect(2) = 5e-06
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = +1

Query: 133 YQRSSTAVSVVAPICYAHLAAAQVAFF 213
           YQRS+TA+S+VAP+ YAHLAA QV+ F
Sbjct: 799 YQRSTTAISIVAPVRYAHLAATQVSQF 825



 Score = 32.0 bits (71), Expect(2) = 5e-06
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +3

Query: 261 VPELPPFHPRVSSSMFFC 314
           VPELP  H +V SSMFFC
Sbjct: 849 VPELPRLHEKVCSSMFFC 866


>emb|CBI32885.3| unnamed protein product [Vitis vinifera]
          Length = 879

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = +1

Query: 1   VVSSREWPLVSRYRASIRAQSPKVEMIDSLFKPISESKDEGIIR 132
           VVSSR WPL+SRYRAS+R QSPKVEMIDSLFKP+S+ KD GI+R
Sbjct: 621 VVSSRCWPLISRYRASVRTQSPKVEMIDSLFKPVSDDKDLGIVR 664



 Score = 43.1 bits (100), Expect(2) = 5e-06
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = +1

Query: 133 YQRSSTAVSVVAPICYAHLAAAQVAFF 213
           YQRS+TA+S+VAP+ YAHLAA QV+ F
Sbjct: 812 YQRSTTAISIVAPVRYAHLAATQVSQF 838



 Score = 32.0 bits (71), Expect(2) = 5e-06
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +3

Query: 261 VPELPPFHPRVSSSMFFC 314
           VPELP  H +V SSMFFC
Sbjct: 862 VPELPRLHEKVCSSMFFC 879


>ref|NP_197602.2| PAZ and piwi domain-containing protein [Arabidopsis thaliana]
           gi|122214302|sp|Q3E984.1|AGO8_ARATH RecName:
           Full=Protein argonaute 8 gi|332005538|gb|AED92921.1| PAZ
           and piwi domain-containing protein [Arabidopsis
           thaliana]
          Length = 850

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 33/44 (75%), Positives = 40/44 (90%)
 Frame = +1

Query: 1   VVSSREWPLVSRYRASIRAQSPKVEMIDSLFKPISESKDEGIIR 132
           VVSSREWPL+S+YRA +R QSPKVEMIDSLFKP+S+  D+GI+R
Sbjct: 622 VVSSREWPLISKYRACVRTQSPKVEMIDSLFKPVSDKDDQGIMR 665



 Score = 47.8 bits (112), Expect(2) = 8e-06
 Identities = 21/25 (84%), Positives = 25/25 (100%)
 Frame = +1

Query: 133 YQRSSTAVSVVAPICYAHLAAAQVA 207
           YQRS+TA+S+VAPICYAHLAAAQ+A
Sbjct: 783 YQRSTTAISLVAPICYAHLAAAQMA 807



 Score = 26.6 bits (57), Expect(2) = 8e-06
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 261 VPELPPFHPRVSSSMFFC 314
           VP +P  +  V+SSMFFC
Sbjct: 833 VPPMPKLNTNVASSMFFC 850


>ref|XP_002527764.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223532851|gb|EEF34625.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 921

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 32/44 (72%), Positives = 42/44 (95%)
 Frame = +1

Query: 1   VVSSREWPLVSRYRASIRAQSPKVEMIDSLFKPISESKDEGIIR 132
           VVSSR+WPL+SRYRA +R QSPKVEMIDSL+KP+S+++DEG++R
Sbjct: 673 VVSSRQWPLISRYRACVRTQSPKVEMIDSLYKPVSDTEDEGMMR 716



 Score = 46.6 bits (109), Expect(2) = 4e-06
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = +1

Query: 133 YQRSSTAVSVVAPICYAHLAAAQVAFF 213
           YQRS+TA+SVVAP+CYAHLAA Q+  F
Sbjct: 854 YQRSTTAISVVAPVCYAHLAATQMGQF 880



 Score = 28.9 bits (63), Expect(2) = 4e-06
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 261 VPELPPFHPRVSSSMFFC 314
           VP++P    +VSSSMFFC
Sbjct: 904 VPQMPKLSDKVSSSMFFC 921


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