BLASTX nr result

ID: Coptis23_contig00017379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017379
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263972.1| PREDICTED: uncharacterized protein LOC100242...   190   1e-46
ref|NP_188591.2| uncharacterized protein [Arabidopsis thaliana] ...   189   3e-46
dbj|BAB02541.1| unnamed protein product [Arabidopsis thaliana]        189   3e-46
ref|NP_850614.1| uncharacterized protein [Arabidopsis thaliana] ...   189   3e-46
ref|XP_002313172.1| predicted protein [Populus trichocarpa] gi|2...   184   7e-45

>ref|XP_002263972.1| PREDICTED: uncharacterized protein LOC100242868 [Vitis vinifera]
          Length = 639

 Score =  190 bits (483), Expect = 1e-46
 Identities = 108/204 (52%), Positives = 129/204 (63%), Gaps = 11/204 (5%)
 Frame = +1

Query: 1   WQETNSRLRRLQDPSST------PKLVSSKRFXXXXXXXXXXXXXXXXGMAPPLRGPARP 162
           WQETNSRLRRLQDP S        ++  + +F                 M  P+RG  RP
Sbjct: 311 WQETNSRLRRLQDPGSPLSTSPGSRMAVAAKFIQSKKFPSDNPLASPRTMMSPIRGATRP 370

Query: 163 VSPSKLMVPCXXXXXXXXXXXXTR--NATPSAMGAQVSSMPSILCFS---GRAKLGESRV 327
            SPSKLM                R  NA  S + +  S  PSIL FS    R K+GE+R+
Sbjct: 371 ASPSKLMASSMPVSSPIRASSPARLRNAVASPLSSSSSIAPSILSFSVDVRRGKMGENRI 430

Query: 328 VDAHLLRLLYNRQLQWGFVNARADAALFVQRLTAEKNLYDAWISMSELRESVTLKRIKLQ 507
           VDAHLLRLLYNR LQW FVNARADAAL VQR+ AE+NL++AWI++S+LR+SVT KR+KLQ
Sbjct: 431 VDAHLLRLLYNRHLQWRFVNARADAALLVQRMRAERNLWNAWITISKLRDSVTSKRMKLQ 490

Query: 508 LVRQNLKLTSILKGQMTYLEEWGL 579
            +R+ LKLTSILKGQM YLEEW L
Sbjct: 491 WLRRKLKLTSILKGQMAYLEEWAL 514


>ref|NP_188591.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332642738|gb|AEE76259.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 627

 Score =  189 bits (480), Expect = 3e-46
 Identities = 110/205 (53%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
 Frame = +1

Query: 1   WQETNSRLRRLQDP--------SSTPKLVSSKRFXXXXXXXXXXXXXXXXGMAPPLRGPA 156
           WQETNSRLRR+QDP        SS    +SSK                  GM  P+RG  
Sbjct: 328 WQETNSRLRRMQDPGSPQCSSPSSRISSISSKFSQSKRFSSDSPLTSSPRGMTSPIRGAT 387

Query: 157 RPVSPSKLMVPCXXXXXXXXXXXX-TRNATPSAMGAQVSSMPSILCFSG---RAKLGESR 324
           RP SPSKL                  RN     M A   ++PSILCFS    R K+GE R
Sbjct: 388 RPASPSKLWATATSAPARTSSSPSRVRNGVSEQMNAYNRTLPSILCFSADIRRGKIGEDR 447

Query: 325 VVDAHLLRLLYNRQLQWGFVNARADAALFVQRLTAEKNLYDAWISMSELRESVTLKRIKL 504
           V+DAHLLRLLYNR LQW F NARAD+ L VQRL+AEK L++AW+S+SELR SVTLKRIKL
Sbjct: 448 VMDAHLLRLLYNRDLQWRFANARADSTLMVQRLSAEKILWNAWVSISELRHSVTLKRIKL 507

Query: 505 QLVRQNLKLTSILKGQMTYLEEWGL 579
            L+RQ LKL SILK QM YLEEW L
Sbjct: 508 LLMRQKLKLASILKEQMCYLEEWSL 532


>dbj|BAB02541.1| unnamed protein product [Arabidopsis thaliana]
          Length = 701

 Score =  189 bits (480), Expect = 3e-46
 Identities = 110/205 (53%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
 Frame = +1

Query: 1   WQETNSRLRRLQDP--------SSTPKLVSSKRFXXXXXXXXXXXXXXXXGMAPPLRGPA 156
           WQETNSRLRR+QDP        SS    +SSK                  GM  P+RG  
Sbjct: 328 WQETNSRLRRMQDPGSPQCSSPSSRISSISSKFSQSKRFSSDSPLTSSPRGMTSPIRGAT 387

Query: 157 RPVSPSKLMVPCXXXXXXXXXXXX-TRNATPSAMGAQVSSMPSILCFSG---RAKLGESR 324
           RP SPSKL                  RN     M A   ++PSILCFS    R K+GE R
Sbjct: 388 RPASPSKLWATATSAPARTSSSPSRVRNGVSEQMNAYNRTLPSILCFSADIRRGKIGEDR 447

Query: 325 VVDAHLLRLLYNRQLQWGFVNARADAALFVQRLTAEKNLYDAWISMSELRESVTLKRIKL 504
           V+DAHLLRLLYNR LQW F NARAD+ L VQRL+AEK L++AW+S+SELR SVTLKRIKL
Sbjct: 448 VMDAHLLRLLYNRDLQWRFANARADSTLMVQRLSAEKILWNAWVSISELRHSVTLKRIKL 507

Query: 505 QLVRQNLKLTSILKGQMTYLEEWGL 579
            L+RQ LKL SILK QM YLEEW L
Sbjct: 508 LLMRQKLKLASILKEQMCYLEEWSL 532


>ref|NP_850614.1| uncharacterized protein [Arabidopsis thaliana]
           gi|26451622|dbj|BAC42908.1| unknown protein [Arabidopsis
           thaliana] gi|28973259|gb|AAO63954.1| unknown protein
           [Arabidopsis thaliana] gi|332642739|gb|AEE76260.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 644

 Score =  189 bits (480), Expect = 3e-46
 Identities = 110/205 (53%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
 Frame = +1

Query: 1   WQETNSRLRRLQDP--------SSTPKLVSSKRFXXXXXXXXXXXXXXXXGMAPPLRGPA 156
           WQETNSRLRR+QDP        SS    +SSK                  GM  P+RG  
Sbjct: 328 WQETNSRLRRMQDPGSPQCSSPSSRISSISSKFSQSKRFSSDSPLTSSPRGMTSPIRGAT 387

Query: 157 RPVSPSKLMVPCXXXXXXXXXXXX-TRNATPSAMGAQVSSMPSILCFSG---RAKLGESR 324
           RP SPSKL                  RN     M A   ++PSILCFS    R K+GE R
Sbjct: 388 RPASPSKLWATATSAPARTSSSPSRVRNGVSEQMNAYNRTLPSILCFSADIRRGKIGEDR 447

Query: 325 VVDAHLLRLLYNRQLQWGFVNARADAALFVQRLTAEKNLYDAWISMSELRESVTLKRIKL 504
           V+DAHLLRLLYNR LQW F NARAD+ L VQRL+AEK L++AW+S+SELR SVTLKRIKL
Sbjct: 448 VMDAHLLRLLYNRDLQWRFANARADSTLMVQRLSAEKILWNAWVSISELRHSVTLKRIKL 507

Query: 505 QLVRQNLKLTSILKGQMTYLEEWGL 579
            L+RQ LKL SILK QM YLEEW L
Sbjct: 508 LLMRQKLKLASILKEQMCYLEEWSL 532


>ref|XP_002313172.1| predicted protein [Populus trichocarpa] gi|222849580|gb|EEE87127.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  184 bits (468), Expect = 7e-45
 Identities = 107/206 (51%), Positives = 127/206 (61%), Gaps = 15/206 (7%)
 Frame = +1

Query: 1   WQETNSRLRRLQDPSS------------TPKLVSSKRFXXXXXXXXXXXXXXXXGMAPPL 144
           WQETNSRLRRLQDP S            +PK + SKRF                  A P+
Sbjct: 289 WQETNSRLRRLQDPGSPLSTSPGSRMGVSPKAIQSKRFSSDGPLSSPRMLA-----ASPI 343

Query: 145 RGPARPVSPSKLMVPCXXXXXXXXXXXXTRNATPSAMGAQVSSMPSILCFS---GRAKLG 315
           RG  RP SPSKL                   ++PS + +  SS PSIL FS    R K+G
Sbjct: 344 RGATRPASPSKLWTTSASSPSRGM-------SSPSRVRSMSSSSPSILSFSVDLRRGKMG 396

Query: 316 ESRVVDAHLLRLLYNRQLQWGFVNARADAALFVQRLTAEKNLYDAWISMSELRESVTLKR 495
           E R+VDAH+LRLLYNR LQW FVNAR DA   VQRL AEKNL++AW+++SELR SVTL+R
Sbjct: 397 EDRIVDAHVLRLLYNRYLQWRFVNAREDATFMVQRLNAEKNLWNAWVTISELRHSVTLRR 456

Query: 496 IKLQLVRQNLKLTSILKGQMTYLEEW 573
           +KL L+RQ LKLTSILKGQ+ +LEEW
Sbjct: 457 VKLLLLRQKLKLTSILKGQIAHLEEW 482


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