BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017378
         (1412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|2...   164   4e-38
ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|2...   164   4e-38
ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827...   159   2e-36
gb|ABA94541.2| retrotransposon protein, putative, unclassified [...   143   1e-31
ref|XP_002337925.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-28

>ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|222836623|gb|EEE75016.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  164 bits (416), Expect = 4e-38
 Identities = 112/341 (32%), Positives = 172/341 (50%), Gaps = 3/341 (0%)
 Frame = +3

Query: 27   YLKYPKLDFPHFDGTNPRCWVRKCRKFFQIYHVDECQKVNIASLYFEGKADSWFLDYQEG 206
            ++  P+++   F G +PR W+RKC+K+F+I+ +   Q + + S Y EGKAD WF     G
Sbjct: 12   HIPLPRMELSTFRGEDPRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKADVWFEGLVRG 71

Query: 207  KN-LITWEELIVELYERFGDVTRDNYVGEFNKLSQTATVTEYQEQFEELKYLMVSKNRHL 383
             + LI WEE   +L  RFG  ++D+ V EFNKL Q   + +Y E+FEEL+ LM   N  L
Sbjct: 72   SDSLIEWEEFSQDLCRRFG--SKDDIVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLL 129

Query: 384  TDEYFVLSFLSGLKDEIRTSVQMFRPTNLNQAIYLVKMQESTLEIQXXXXXXXXXXXXXA 563
             + Y+V SF+SGLKDEI+  +++     L  A  LV  +++  + +             A
Sbjct: 130  PEAYYVSSFISGLKDEIKPMLKI-----LKPARVLVAFEQAKWQEE-------------A 171

Query: 564  NSYFXXXXXXXXXXXXXXQSQNNLXXXXXXXXXXXXXXXXXXXXXXKRLTPAQMRARREK 743
            N+                +S                          K  + +    R++ 
Sbjct: 172  NNALTKKTRSLQ------RSNPPFHSGRIPGNAPSKYFGPSRTKGVKPFSDSLYEQRKKL 225

Query: 744  GLCYNCDEQYKPGHFCKSQQL*MLVSNEEDQDEVDKGTVSEEEGLLQEIETNME--ISVN 917
            G C+ C ++Y PGH C S+ L M+   E  +DE     + E E  +Q  +   E  +S+N
Sbjct: 226  GQCFKCGDKYMPGHRCNSKGLHMIEGVEGGEDE----EIGEFEDNMQGTDQIDEYGLSLN 281

Query: 918  ALAGNVSQNTIRIQGLLKKRHITILIDSGSPHSFIDLESAK 1040
            ALA N + NTIRI+G  + +++ ILIDSGS HSFI+  + K
Sbjct: 282  ALADNDTYNTIRIKGNCQGQNLIILIDSGSTHSFINESTIK 322


>ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|222832022|gb|EEE70499.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  164 bits (416), Expect = 4e-38
 Identities = 112/341 (32%), Positives = 172/341 (50%), Gaps = 3/341 (0%)
 Frame = +3

Query: 27   YLKYPKLDFPHFDGTNPRCWVRKCRKFFQIYHVDECQKVNIASLYFEGKADSWFLDYQEG 206
            ++  P+++   F G +PR W+RKC+K+F+I+ +   Q + + S Y EGKAD WF     G
Sbjct: 12   HIPLPRMELSTFRGEDPRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKADVWFEGLVRG 71

Query: 207  KN-LITWEELIVELYERFGDVTRDNYVGEFNKLSQTATVTEYQEQFEELKYLMVSKNRHL 383
             + LI WEE   +L  RFG  ++D+ V EFNKL Q   + +Y E+FEEL+ LM   N  L
Sbjct: 72   SDSLIEWEEFSQDLCRRFG--SKDDIVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLL 129

Query: 384  TDEYFVLSFLSGLKDEIRTSVQMFRPTNLNQAIYLVKMQESTLEIQXXXXXXXXXXXXXA 563
             + Y+V SF+SGLKDEI+  +++     L  A  LV  +++  + +             A
Sbjct: 130  PEAYYVSSFISGLKDEIKPMLKI-----LKPARVLVAFEQAKWQEE-------------A 171

Query: 564  NSYFXXXXXXXXXXXXXXQSQNNLXXXXXXXXXXXXXXXXXXXXXXKRLTPAQMRARREK 743
            N+                +S                          K  + +    R++ 
Sbjct: 172  NNALTKKTRSLQ------RSNPPFHSGRIPGNAPSKYFGPSRTKGVKPFSDSLYEQRKKL 225

Query: 744  GLCYNCDEQYKPGHFCKSQQL*MLVSNEEDQDEVDKGTVSEEEGLLQEIETNME--ISVN 917
            G C+ C ++Y PGH C S+ L M+   E  +DE     + E E  +Q  +   E  +S+N
Sbjct: 226  GQCFKCGDKYMPGHRCNSKGLHMIEGVEGGEDE----EIGEFEDNMQGTDQIDEYGLSLN 281

Query: 918  ALAGNVSQNTIRIQGLLKKRHITILIDSGSPHSFIDLESAK 1040
            ALA N + NTIRI+G  + +++ ILIDSGS HSFI+  + K
Sbjct: 282  ALADNDTYNTIRIKGNCQGQNLIILIDSGSTHSFINESTIK 322


>ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827899 [Brachypodium
            distachyon]
          Length = 1665

 Score =  159 bits (401), Expect = 2e-36
 Identities = 91/347 (26%), Positives = 163/347 (46%)
 Frame = +3

Query: 24   NYLKYPKLDFPHFDGTNPRCWVRKCRKFFQIYHVDECQKVNIASLYFEGKADSWFLDYQE 203
            ++ + PK DFP FDG NP+ W     K+F +YHV        A+++F G A  W   Y+ 
Sbjct: 329  SHSRMPKTDFPKFDGDNPKWWKAVAEKYFSMYHVPRDTWARFATMHFLGNAALWLQTYEA 388

Query: 204  GKNLITWEELIVELYERFGDVTRDNYVGEFNKLSQTATVTEYQEQFEELKYLMVSKNRHL 383
               + +WEEL+V ++ +FG      Y+    +  QT +V  Y  +FEEL++ ++  NRH 
Sbjct: 389  EHEVDSWEELVVVVHAKFGKDKHHRYLEALERCKQTESVNNYFHKFEELRHKVLVHNRHY 448

Query: 384  TDEYFVLSFLSGLKDEIRTSVQMFRPTNLNQAIYLVKMQESTLEIQXXXXXXXXXXXXXA 563
             + +FV  F++GLK EI+ ++++ +P  ++ A+ L + QE  LE                
Sbjct: 449  DEAFFVTKFVAGLKREIQKAIRLHKPRTVDAALSLAETQEEMLEEARLYSSSKLKHDYKP 508

Query: 564  NSYFXXXXXXXXXXXXXXQSQNNLXXXXXXXXXXXXXXXXXXXXXXKRLTPAQMRARREK 743
            +  F              + + +                            A    RR +
Sbjct: 509  SYQFPGIGKGILTVPAEDKKKGD------------------SKPVWSEKMAALRAQRRAR 550

Query: 744  GLCYNCDEQYKPGHFCKSQQL*MLVSNEEDQDEVDKGTVSEEEGLLQEIETNMEISVNAL 923
            G C+ C ++Y+PGH C +     +V    +  +V   + +E+E    + ++ M +S+ A 
Sbjct: 551  GECFKCGDKYQPGHKCAASVPLHMVEELLEVLQVSTESDTEQENEDSDSDSLMHLSICAT 610

Query: 924  AGNVSQNTIRIQGLLKKRHITILIDSGSPHSFIDLESAKQGGCSVEP 1064
            +G  ++ ++R+QG+++ + + ILIDSGS  SFI   +       V+P
Sbjct: 611  SGTSNKKSMRLQGVMEGKQVLILIDSGSNGSFISQAAVAAIKLQVQP 657


>gb|ABA94541.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1347

 Score =  143 bits (360), Expect = 1e-31
 Identities = 100/334 (29%), Positives = 160/334 (47%), Gaps = 4/334 (1%)
 Frame = +3

Query: 33   KYPKLDFPHFDGTNPRCWVRKCRKFFQIYHVDECQKVNIASLYFEGKADSWFLDYQEGKN 212
            + PK +FP FDG NP+ W +K  K+F +Y V      + A+L+F G A  W   Y+E   
Sbjct: 130  RLPKTEFPKFDGDNPKLWKKKSEKYFDMYQVPYATWASFATLHFVGNAALWLQTYEELHA 189

Query: 213  LITWEELIVELYERFGDVTRDNYVGEFNKLSQTATVTEYQEQFEELKYLMVSKNRHLTDE 392
            + +W EL V +  +FG      ++ + + L Q  T+ EY  +FEEL + ++  NR   + 
Sbjct: 190  VESWSELCVAVNGKFGRDRYQQFLEKLDNLKQEGTIEEYYSRFEELMHKVLVYNRGYDET 249

Query: 393  YFVLSFLSGLKDEIRTSVQMFRPTNLNQAIYLVKMQESTL-EIQXXXXXXXXXXXXXANS 569
            +FV  FL GLK EI+ ++++ RP  ++ A+ L K QE  L E+               N+
Sbjct: 250  FFVTKFLGGLKTEIKAAIKLHRPGTVDAALSLAKTQEELLMEVNLKAYHKTTIKESFKNN 309

Query: 570  YFXXXXXXXXXXXXXXQSQNNLXXXXXXXXXXXXXXXXXXXXXXKRLTPAQMRARREKGL 749
            +               + +                           L  A+ RAR   G 
Sbjct: 310  FKVPSLAKGILGPPPDEIKKT-------------EERPKWEEQYDSLNAAR-RAR---GE 352

Query: 750  CYNCDEQYKPGHFC-KSQQL*MLVSNEEDQDEVDKGTVSEEEGLLQEIETNME--ISVNA 920
            C+ C E++ PGH C K+ QL +L       + ++    S+E G ++E  ++ E  +S NA
Sbjct: 353  CFKCGEKFGPGHKCPKAVQLHVL------DELLEVFQFSDEPGQVEESSSDEELLLSENA 406

Query: 921  LAGNVSQNTIRIQGLLKKRHITILIDSGSPHSFI 1022
            L G   + TI +QGL+++  + ILIDSGS  SF+
Sbjct: 407  LFGTEGKRTIWLQGLIQQ--VLILIDSGSSSSFM 438


>ref|XP_002337925.1| predicted protein [Populus trichocarpa] gi|222870020|gb|EEF07151.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score =  132 bits (331), Expect = 3e-28
 Identities = 86/267 (32%), Positives = 126/267 (47%), Gaps = 2/267 (0%)
 Frame = +3

Query: 39  PKLDFPHFDGTNPRCWVRKCRKFFQIYHVDECQKVNIASLYFEGKADSWFLDYQEG-KNL 215
           P++D   F G NPR W+R+C KFF++      + V +ASLY EGKA+ WF  Y  G + +
Sbjct: 92  PRMDLTTFWGDNPRGWLRRCNKFFKLNTTPFQRWVELASLYLEGKAEIWFEGYMCGVEGV 151

Query: 216 ITWEELIVELYERFGDVTRDNYVGEFNKLSQTATVTEYQEQFEELKYLMVSKNRHLTDEY 395
           +  EE    +  RFG+  R + V EFNKL Q   V EY ++FEELK LM S N  L + Y
Sbjct: 152 VDEEEFSRAICSRFGN--RTDIVEEFNKLMQEGDVDEYVKRFEELKSLMHSLNSLLPESY 209

Query: 396 FVLSFLSGLKDEIRTSVQMFRPTNLNQAIYLVKMQESTLEIQXXXXXXXXXXXXXANSYF 575
           ++ SF+SGLK++I+  +++ +P  L  A    K QE +  +               N + 
Sbjct: 210 YISSFISGLKEDIKPMLKILKPVTLMIAFDQAKWQEESNNV-----------LARDNKFM 258

Query: 576 XXXXXXXXXXXXXXQSQNNLXXXXXXXXXXXXXXXXXXXXXXKRLTPAQM-RARREKGLC 752
                           Q N                       K+  P  M   RR  G C
Sbjct: 259 PRPAAVVQMGIPIGNRQTN----------------YVNDNQQKQKVPKTMHEQRRRLGQC 302

Query: 753 YNCDEQYKPGHFCKSQQL*MLVSNEED 833
           + C +++ PGH C  ++L M+  NEE+
Sbjct: 303 FKCGDKFMPGHKCNVKELHMIEGNEEE 329