BLASTX nr result

ID: Coptis23_contig00017376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017376
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281856.1| PREDICTED: protein SEC13 homolog [Vitis vini...   106   2e-21
ref|XP_004150601.1| PREDICTED: protein SEC13 homolog [Cucumis sa...   105   4e-21
ref|XP_003551800.1| PREDICTED: protein SEC13 homolog [Glycine max]    105   5e-21
ref|XP_003532149.1| PREDICTED: protein SEC13 homolog [Glycine max]    105   5e-21
gb|ACU20139.1| unknown [Glycine max]                                  105   5e-21

>ref|XP_002281856.1| PREDICTED: protein SEC13 homolog [Vitis vinifera]
           gi|147809687|emb|CAN73348.1| hypothetical protein
           VITISV_040760 [Vitis vinifera]
          Length = 301

 Score =  106 bits (264), Expect = 2e-21
 Identities = 61/96 (63%), Positives = 66/96 (68%), Gaps = 12/96 (12%)
 Frame = -1

Query: 254 MPGQKIETGHTDTDTQFMMW*W----IITSSDTTIKIVGVSSTASQHLATLSGHQGPVWQ 87
           MP QKIETGH DT     M  +       SSDTTIKI+GVS+ ASQHLATL GHQGPVWQ
Sbjct: 1   MPSQKIETGHQDTVHDVAMDYYGKRVATASSDTTIKIIGVSNNASQHLATLIGHQGPVWQ 60

Query: 86  VL--------NLGSRSYDGGRVIIWKEGNQNEWSQA 3
           V+         L S SYD GRVIIWKEGNQNEW+QA
Sbjct: 61  VVWAHPKFGSILASCSYD-GRVIIWKEGNQNEWTQA 95


>ref|XP_004150601.1| PREDICTED: protein SEC13 homolog [Cucumis sativus]
           gi|449528945|ref|XP_004171462.1| PREDICTED: protein
           SEC13 homolog [Cucumis sativus]
          Length = 301

 Score =  105 bits (262), Expect = 4e-21
 Identities = 61/96 (63%), Positives = 66/96 (68%), Gaps = 12/96 (12%)
 Frame = -1

Query: 254 MPGQKIETGHTDTDTQFMMW*W----IITSSDTTIKIVGVSSTASQHLATLSGHQGPVWQ 87
           MPGQKIETGH DT     M  +       SSD TIKI GVS++A+QHLATL+GHQGPVWQ
Sbjct: 1   MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ 60

Query: 86  VL--------NLGSRSYDGGRVIIWKEGNQNEWSQA 3
           V          L S SYD GRVIIWKEGNQNEWSQA
Sbjct: 61  VAWAHPKFGPLLASCSYD-GRVIIWKEGNQNEWSQA 95


>ref|XP_003551800.1| PREDICTED: protein SEC13 homolog [Glycine max]
          Length = 301

 Score =  105 bits (261), Expect = 5e-21
 Identities = 59/96 (61%), Positives = 66/96 (68%), Gaps = 12/96 (12%)
 Frame = -1

Query: 254 MPGQKIETGHTDTDTQFMMW*W----IITSSDTTIKIVGVSSTASQHLATLSGHQGPVWQ 87
           MP QK+ETGH DT     M  +       SSD TIKI+GVS+TASQHLATL+GHQGPVWQ
Sbjct: 1   MPSQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLTGHQGPVWQ 60

Query: 86  VL--------NLGSRSYDGGRVIIWKEGNQNEWSQA 3
           V          L S SYD GRVI+WKEGNQNEW+QA
Sbjct: 61  VAWAHPKFGSLLASCSYD-GRVIVWKEGNQNEWTQA 95


>ref|XP_003532149.1| PREDICTED: protein SEC13 homolog [Glycine max]
          Length = 301

 Score =  105 bits (261), Expect = 5e-21
 Identities = 59/96 (61%), Positives = 66/96 (68%), Gaps = 12/96 (12%)
 Frame = -1

Query: 254 MPGQKIETGHTDTDTQFMMW*W----IITSSDTTIKIVGVSSTASQHLATLSGHQGPVWQ 87
           MP QK+ETGH DT     M  +       SSD TIKI+GVS+TASQHLATL+GHQGPVWQ
Sbjct: 1   MPSQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLTGHQGPVWQ 60

Query: 86  VL--------NLGSRSYDGGRVIIWKEGNQNEWSQA 3
           V          L S SYD GRVI+WKEGNQNEW+QA
Sbjct: 61  VAWAHPKFGSLLASCSYD-GRVIVWKEGNQNEWTQA 95


>gb|ACU20139.1| unknown [Glycine max]
          Length = 301

 Score =  105 bits (261), Expect = 5e-21
 Identities = 59/96 (61%), Positives = 66/96 (68%), Gaps = 12/96 (12%)
 Frame = -1

Query: 254 MPGQKIETGHTDTDTQFMMW*W----IITSSDTTIKIVGVSSTASQHLATLSGHQGPVWQ 87
           MP QK+ETGH DT     M  +       SSD TIKI+GVS+TASQHLATL+GHQGPVWQ
Sbjct: 1   MPSQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLTGHQGPVWQ 60

Query: 86  VL--------NLGSRSYDGGRVIIWKEGNQNEWSQA 3
           V          L S SYD GRVI+WKEGNQNEW+QA
Sbjct: 61  VAWAHPKFGSLLASCSYD-GRVIVWKEGNQNEWTQA 95


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