BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017372
         (1134 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vi...   491   e-136
ref|XP_002528949.1| ribonuclease z, chloroplast, putative [Ricin...   476   e-132
ref|XP_002321158.1| predicted protein [Populus trichocarpa] gi|2...   470   e-130
ref|NP_001242565.1| uncharacterized protein LOC100807082 [Glycin...   466   e-129
ref|XP_004156084.1| PREDICTED: ribonuclease Z, chloroplastic-lik...   464   e-128

>ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vitis vinifera]
            gi|297739240|emb|CBI28891.3| unnamed protein product
            [Vitis vinifera]
          Length = 354

 Score =  491 bits (1263), Expect = e-136
 Identities = 239/326 (73%), Positives = 276/326 (84%), Gaps = 1/326 (0%)
 Frame = +1

Query: 52   IPLPTLHNNRSIKNHTLYALRGSGFLSAVDRVIEEEE-YRKYRAQTNRKGVDLEGYVIEG 228
            + +P  H    I  H+    +GSG+LS + R IEEEE YRK RA+  R GVDLEGY IEG
Sbjct: 27   LTIPKPHPKSYITAHSSRP-KGSGYLSLIGRAIEEEEEYRKARAEVARNGVDLEGYSIEG 85

Query: 229  VSIGGHETCIVVPRLNAAFDIGRCPSRAIQQDFLFITHAHLDHIGGLPMYVATRGLYSLK 408
            +SIGGHETC+++P L +AFDIGRCPSRAIQQ+FLFITHAHLDHIGGLPMYVATRGLY+LK
Sbjct: 86   ISIGGHETCVIIPELKSAFDIGRCPSRAIQQNFLFITHAHLDHIGGLPMYVATRGLYNLK 145

Query: 409  PPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXXGETYELRNDLVVRPFKTHHVIP 588
            PPTIFVPPCIKEDVEKLF+IHR +SQ            GETYE+RN+LVVRPFKTHHVIP
Sbjct: 146  PPTIFVPPCIKEDVEKLFDIHRALSQVELKLDLVALDVGETYEMRNNLVVRPFKTHHVIP 205

Query: 589  SQGYVIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDVVLSPEMAFTGDTTSDFLLDPRN 768
            SQGYVIY++RKKLKKQY HLKGKQIEKLK  G+EITD +LSPE+AFTGDT SDF+L+PRN
Sbjct: 206  SQGYVIYTVRKKLKKQYIHLKGKQIEKLKNSGIEITDTILSPEVAFTGDTRSDFMLEPRN 265

Query: 769  ADALRAKILITEATFLDGGISIEHARQHGHTHLFELIEHAKWMRNEAILLTHFSSRYKIQ 948
            ADALRAK+LITEATFLD GISI+HAR+HGHTHLFE+IE+A+W+RN+A+LLTHFSSRY I+
Sbjct: 266  ADALRAKVLITEATFLDNGISIDHAREHGHTHLFEIIENAEWIRNKAVLLTHFSSRYHIE 325

Query: 949  DIDEAVSKLQQKVPGKVVALKEGFKS 1026
            DI +AVSKLQ KV  +VV L EGFKS
Sbjct: 326  DIRKAVSKLQSKVSARVVPLMEGFKS 351


>ref|XP_002528949.1| ribonuclease z, chloroplast, putative [Ricinus communis]
            gi|223531595|gb|EEF33423.1| ribonuclease z, chloroplast,
            putative [Ricinus communis]
          Length = 361

 Score =  476 bits (1226), Expect = e-132
 Identities = 229/311 (73%), Positives = 267/311 (85%), Gaps = 1/311 (0%)
 Frame = +1

Query: 106  ALRGSGFLSAVDRVIEEEE-YRKYRAQTNRKGVDLEGYVIEGVSIGGHETCIVVPRLNAA 282
            +L+ +G+LSA+ RVIEEEE YRK RA   RKG+DLEGY IEG+SIGG ETC+++P    A
Sbjct: 51   SLKSTGYLSAIGRVIEEEEEYRKARAAVIRKGIDLEGYSIEGLSIGGQETCLIIPEFKCA 110

Query: 283  FDIGRCPSRAIQQDFLFITHAHLDHIGGLPMYVATRGLYSLKPPTIFVPPCIKEDVEKLF 462
            FDIGRCPSRAI Q+F+FITHAHLDHIGGLPMYVA+RGLY+LKPPT+FVPPCIKEDVEKLF
Sbjct: 111  FDIGRCPSRAIHQNFVFITHAHLDHIGGLPMYVASRGLYNLKPPTVFVPPCIKEDVEKLF 170

Query: 463  EIHRKMSQXXXXXXXXXXXXGETYELRNDLVVRPFKTHHVIPSQGYVIYSIRKKLKKQYT 642
            +IHR M Q            GETYELRN++VVRPF+T HVIPSQGYVIYS+RKKLKKQYT
Sbjct: 171  DIHRSMGQVELNLELVALDVGETYELRNNVVVRPFRTQHVIPSQGYVIYSVRKKLKKQYT 230

Query: 643  HLKGKQIEKLKKQGVEITDVVLSPEMAFTGDTTSDFLLDPRNADALRAKILITEATFLDG 822
            HLKGKQIEKLKK GVEITD++LSPE+AFTGDTT++++LDP NADALRAK+LITEATFLD 
Sbjct: 231  HLKGKQIEKLKKSGVEITDIMLSPEVAFTGDTTAEYMLDPHNADALRAKVLITEATFLDE 290

Query: 823  GISIEHARQHGHTHLFELIEHAKWMRNEAILLTHFSSRYKIQDIDEAVSKLQQKVPGKVV 1002
            G SIEHARQHGHTHL E+IE+A+W+RN+++LLTHFSSRY ++DI +AV KLQ KV  KVV
Sbjct: 291  GFSIEHARQHGHTHLLEIIENAEWIRNKSVLLTHFSSRYTVEDIRQAVLKLQSKVSAKVV 350

Query: 1003 ALKEGFKSAES 1035
             L EGFKS  S
Sbjct: 351  PLTEGFKSTYS 361


>ref|XP_002321158.1| predicted protein [Populus trichocarpa] gi|222861931|gb|EEE99473.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  470 bits (1209), Expect = e-130
 Identities = 232/318 (72%), Positives = 265/318 (83%), Gaps = 1/318 (0%)
 Frame = +1

Query: 85   IKNHTLYALRGSGFLSAVDRVIEEEE-YRKYRAQTNRKGVDLEGYVIEGVSIGGHETCIV 261
            IKN   + ++ S FLS + R IEEEE YRK RA   RKG+DL GY IEG+SIGG ETCI+
Sbjct: 50   IKNKP-FIVKASSFLSEIGRAIEEEEDYRKARAAVIRKGIDLGGYAIEGLSIGGQETCII 108

Query: 262  VPRLNAAFDIGRCPSRAIQQDFLFITHAHLDHIGGLPMYVATRGLYSLKPPTIFVPPCIK 441
            +P    AFDIGRCP+RAI Q+F+FITHAHLDHIGGLPMYVA+RGLYSLKPPTIFVPPCIK
Sbjct: 109  IPEFKCAFDIGRCPTRAIHQNFVFITHAHLDHIGGLPMYVASRGLYSLKPPTIFVPPCIK 168

Query: 442  EDVEKLFEIHRKMSQXXXXXXXXXXXXGETYELRNDLVVRPFKTHHVIPSQGYVIYSIRK 621
            +DVEKLF+IHR M Q            GETYELRND+VVRPF+T HVIPSQGYVIYS+RK
Sbjct: 169  DDVEKLFDIHRAMGQVELNFDLVALDVGETYELRNDVVVRPFRTQHVIPSQGYVIYSVRK 228

Query: 622  KLKKQYTHLKGKQIEKLKKQGVEITDVVLSPEMAFTGDTTSDFLLDPRNADALRAKILIT 801
            KLKKQY HLKGKQIEKLKK GVEITD++LSPE+AFTGDTT++++LDPRNADALRAK+LIT
Sbjct: 229  KLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFTGDTTAEYMLDPRNADALRAKVLIT 288

Query: 802  EATFLDGGISIEHARQHGHTHLFELIEHAKWMRNEAILLTHFSSRYKIQDIDEAVSKLQQ 981
            EATFLD   + EHARQ GHTHLFE+IE+AKW+R++AILLTHFSSRY I+DI EAVSKLQ 
Sbjct: 289  EATFLDEDFTTEHARQRGHTHLFEIIENAKWIRSKAILLTHFSSRYSIEDIREAVSKLQS 348

Query: 982  KVPGKVVALKEGFKSAES 1035
            +V  KVV L EGFKS  S
Sbjct: 349  RVSAKVVPLTEGFKSMYS 366


>ref|NP_001242565.1| uncharacterized protein LOC100807082 [Glycine max]
            gi|255636804|gb|ACU18735.1| unknown [Glycine max]
          Length = 353

 Score =  466 bits (1199), Expect = e-129
 Identities = 228/329 (69%), Positives = 270/329 (82%), Gaps = 2/329 (0%)
 Frame = +1

Query: 55   PLPTLHNNRSIKNHTLYALRGS-GFLSAVDRVIE-EEEYRKYRAQTNRKGVDLEGYVIEG 228
            P P L++  S ++H    L+GS G+LS + +VI+ EE+YR  R+Q +RK +DLEGY IEG
Sbjct: 25   PKPPLNHQVSTQSHVSNVLKGSSGYLSEISKVIDHEEQYRVARSQVSRKVLDLEGYSIEG 84

Query: 229  VSIGGHETCIVVPRLNAAFDIGRCPSRAIQQDFLFITHAHLDHIGGLPMYVATRGLYSLK 408
            +S+GG ETCI++P    +FDIGRCPSRAIQQ+FLFITHAHLDHIGGLPMYVA+RGL++LK
Sbjct: 85   LSVGGQETCIIIPEFKCSFDIGRCPSRAIQQNFLFITHAHLDHIGGLPMYVASRGLFNLK 144

Query: 409  PPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXXGETYELRNDLVVRPFKTHHVIP 588
            PPT+FVPPCIKEDVEKL +IHR M Q            GETYE+RN+LVVRPFKT HVIP
Sbjct: 145  PPTVFVPPCIKEDVEKLLDIHRTMGQVELNAEVVALDVGETYEIRNNLVVRPFKTQHVIP 204

Query: 589  SQGYVIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDVVLSPEMAFTGDTTSDFLLDPRN 768
            SQGYV+YSIRKKL+KQY HL GKQIEKLKK GVEITD++LSPE+AFTGDTTSDF+LDP N
Sbjct: 205  SQGYVVYSIRKKLRKQYAHLNGKQIEKLKKSGVEITDMMLSPEVAFTGDTTSDFMLDPCN 264

Query: 769  ADALRAKILITEATFLDGGISIEHARQHGHTHLFELIEHAKWMRNEAILLTHFSSRYKIQ 948
            ADALRAKI ITEATFLD   SI+HARQHGHTHLFE+I +A+W+RNEA+LLTHFS RY I+
Sbjct: 265  ADALRAKIFITEATFLDDSFSIDHARQHGHTHLFEIIANAQWIRNEAVLLTHFSPRYTIE 324

Query: 949  DIDEAVSKLQQKVPGKVVALKEGFKSAES 1035
            DI +A SKLQ ++  KVV L EGFKS  S
Sbjct: 325  DIRQAASKLQSRLSAKVVPLTEGFKSMYS 353


>ref|XP_004156084.1| PREDICTED: ribonuclease Z, chloroplastic-like [Cucumis sativus]
          Length = 347

 Score =  464 bits (1193), Expect = e-128
 Identities = 230/328 (70%), Positives = 266/328 (81%), Gaps = 6/328 (1%)
 Frame = +1

Query: 61   PTLHNNR----SIKNHT--LYALRGSGFLSAVDRVIEEEEYRKYRAQTNRKGVDLEGYVI 222
            P LH  +    ++++H   + + R SG LS +     EEEYR+ R+Q NRKGVDLEGY I
Sbjct: 21   PLLHTPKPHGVALQSHLNPVNSFRDSGLLSTIG---VEEEYRRARSQVNRKGVDLEGYSI 77

Query: 223  EGVSIGGHETCIVVPRLNAAFDIGRCPSRAIQQDFLFITHAHLDHIGGLPMYVATRGLYS 402
            EG+S+GG ETC+++P    AFDIGRCPSRAIQQ+F+FITHAHLDHIGGLPMYVA+RGLYS
Sbjct: 78   EGISVGGQETCVIIPEFKCAFDIGRCPSRAIQQNFVFITHAHLDHIGGLPMYVASRGLYS 137

Query: 403  LKPPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXXGETYELRNDLVVRPFKTHHV 582
            L PPT+F+P  IKEDVEKL EIHR M Q            GETYE+RN+LV R F+THHV
Sbjct: 138  LSPPTVFLPASIKEDVEKLLEIHRNMGQVELDVDLVALDVGETYEMRNNLVCRAFETHHV 197

Query: 583  IPSQGYVIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDVVLSPEMAFTGDTTSDFLLDP 762
            IPSQGYVIYS+RKKLKKQY HLKGKQIEKLKK GVEITD +LSPE+AFTGDTT DF+LDP
Sbjct: 198  IPSQGYVIYSVRKKLKKQYMHLKGKQIEKLKKSGVEITDTILSPEVAFTGDTTPDFMLDP 257

Query: 763  RNADALRAKILITEATFLDGGISIEHARQHGHTHLFELIEHAKWMRNEAILLTHFSSRYK 942
            RNADALRAKILITEATFLD  +SIEHARQHGHTH+FE+IE+A+W+RN+AILLTHFSSRY 
Sbjct: 258  RNADALRAKILITEATFLDEAVSIEHARQHGHTHIFEIIENAQWIRNKAILLTHFSSRYH 317

Query: 943  IQDIDEAVSKLQQKVPGKVVALKEGFKS 1026
            I+DI +AVSKLQ  V  KVV L EGFKS
Sbjct: 318  IEDIRKAVSKLQSNVTAKVVPLTEGFKS 345