BLASTX nr result

ID: Coptis23_contig00017371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017371
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331053.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002262947.2| PREDICTED: protein OS-9-like [Vitis vinifera]      67   1e-09
emb|CBI25568.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_003546580.1| PREDICTED: protein OS-9-like [Glycine max]         64   1e-08
gb|AFK33913.1| unknown [Lotus japonicus]                               63   2e-08

>ref|XP_002331053.1| predicted protein [Populus trichocarpa] gi|222872983|gb|EEF10114.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/46 (69%), Positives = 36/46 (78%)
 Frame = -2

Query: 144 VLSNQIFSIHGGGGFGRSSHEPKYKIEFHEPHSPFHPGDDQESMVM 7
           VL++QI+  H GG F RSS EPKY+IEFH   SPFHP DDQESMVM
Sbjct: 17  VLADQIYPTHAGGTFSRSSREPKYQIEFHSEESPFHPDDDQESMVM 62


>ref|XP_002262947.2| PREDICTED: protein OS-9-like [Vitis vinifera]
          Length = 299

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = -2

Query: 144 VLSNQIFSIHGGGGFGRSSHEPKYKIEFHEPHSPFHPGDDQESMVM 7
           V ++Q+F  +GGG FG  S EPKYKIEFH   SPFHP DDQES++M
Sbjct: 22  VTADQVFPAYGGGTFGSGSLEPKYKIEFHSEDSPFHPDDDQESVIM 67


>emb|CBI25568.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = -2

Query: 144 VLSNQIFSIHGGGGFGRSSHEPKYKIEFHEPHSPFHPGDDQESMVM 7
           V ++Q+F  +GGG FG  S EPKYKIEFH   SPFHP DDQES++M
Sbjct: 19  VTADQVFPAYGGGTFGSGSLEPKYKIEFHSEDSPFHPDDDQESVIM 64


>ref|XP_003546580.1| PREDICTED: protein OS-9-like [Glycine max]
          Length = 294

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/54 (64%), Positives = 37/54 (68%), Gaps = 5/54 (9%)
 Frame = -2

Query: 147 SVLSNQIF-----SIHGGGGFGRSSHEPKYKIEFHEPHSPFHPGDDQESMVMSD 1
           S  + QIF     SI GGGG GRS  EPKYKIEFH   SPFHP DDQES+VM D
Sbjct: 14  SYATEQIFPAHIGSIFGGGGGGRS-REPKYKIEFHPEDSPFHPDDDQESIVMPD 66


>gb|AFK33913.1| unknown [Lotus japonicus]
          Length = 203

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/54 (57%), Positives = 35/54 (64%), Gaps = 8/54 (14%)
 Frame = -2

Query: 138 SNQIFSIH--------GGGGFGRSSHEPKYKIEFHEPHSPFHPGDDQESMVMSD 1
           + QIF +H        GGGG   SS EPKYKIEFH   SPFHP DDQES++M D
Sbjct: 19  AEQIFPVHIASIFGGGGGGGGTSSSREPKYKIEFHPEDSPFHPEDDQESIIMPD 72


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