BLASTX nr result

ID: Coptis23_contig00017346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017346
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333207.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002528769.1| conserved hypothetical protein [Ricinus comm...    68   9e-10
emb|CBI20385.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002265618.1| PREDICTED: uncharacterized protein LOC100255...    63   2e-08
ref|XP_003535480.1| PREDICTED: uncharacterized protein LOC100819...    62   4e-08

>ref|XP_002333207.1| predicted protein [Populus trichocarpa] gi|222835096|gb|EEE73545.1|
           predicted protein [Populus trichocarpa]
          Length = 729

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   VMRPSMMPMM-GIWKIRYHDTCKEVKELFHKRGMRSRHQLGQAIDMLFGLPTDIRPAAVK 179
           +M+P+MM  + GI KIR+ DTC E +  F +R + S  + G A D + G+ T+++P  VK
Sbjct: 581 IMQPAMMAAVAGIGKIRFRDTCAEAERFFKRRDLGSNKEWG-ACDSILGVNTEVKPVDVK 639

Query: 180 GKRNKSALFDAIILANQLLELEMRW 254
           G R+KS LFDA  LA  L   E RW
Sbjct: 640 GDRSKSVLFDACRLAKLLEREEKRW 664


>ref|XP_002528769.1| conserved hypothetical protein [Ricinus communis]
           gi|223531772|gb|EEF33591.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 769

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
 Frame = +3

Query: 3   VMRPSMMPMM-GIWKIRYHDTCKEVKELFHKRGMRSRHQLGQAIDMLFGLPTDIRPAAVK 179
           +M+P +M  + GI KIR+ DTC E    F ++G+RS H+  +A   +  + T+++P AVK
Sbjct: 620 IMQPGIMQAVAGIGKIRFRDTCAETVRFFVRKGLRS-HEEKRACQCILEVDTEVKPIAVK 678

Query: 180 GKRNKSALFDAIILANQLLEL-EMRW 254
           G R+KS LFD  +LA +L +L E +W
Sbjct: 679 GDRSKSVLFDGSMLAQELQKLKEKKW 704


>emb|CBI20385.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = +3

Query: 3   VMRPSMMPMM-GIWKIRYHDTCKEVKELFHKRGMRSRHQLGQAIDMLFGLPTDIRPAAVK 179
           VMRP+MM  + GI +IR+ DTC E K+ F +      +Q+ +  + L  + T + P  VK
Sbjct: 6   VMRPTMMSAVAGIGQIRFRDTCAEAKKFFRRGQQEPNYQISEYCEQLLSVDTVVNPIEVK 65

Query: 180 GKRNKSALFDAIILANQLLELE--MRW 254
           G R+KS LFDA +LA  L +L    RW
Sbjct: 66  GDRSKSVLFDACMLAKDLRKLNKTKRW 92


>ref|XP_002265618.1| PREDICTED: uncharacterized protein LOC100255511 [Vitis vinifera]
          Length = 714

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
 Frame = +3

Query: 3   VMRPSMMPMM-GIWKIRYHDTCKEVKELFHKRGM---RSRHQLGQAIDMLFGLPTDIRPA 170
           VMRP+MM  + GI +IR+ DTC+E K+ F ++ +       ++ +A   L  + T ++P 
Sbjct: 560 VMRPTMMSAVAGIGQIRFRDTCEEAKKFFRRKDIIPGGKFKEIEEACKALLLIETVVKPI 619

Query: 171 AVKGKRNKSALFDAIILANQLLELEMR 251
            VKG R+KS LFDA ILA +L +++ R
Sbjct: 620 EVKGDRSKSVLFDACILAKELKKMDER 646


>ref|XP_003535480.1| PREDICTED: uncharacterized protein LOC100819249 [Glycine max]
          Length = 686

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
 Frame = +3

Query: 3   VMRPSMMPMMGIWKIRYHDTCKEVKELFHKRGMRSRHQLGQAIDMLFGLPTDIRPAAVKG 182
           VM P M+P  GI +IR+ DTC E +E+  +R   S     Q ++++  + TD+ P+ VKG
Sbjct: 534 VMCPFMLPN-GIGQIRFEDTCAEAREVLQERKYISDRD--QVLEVILRVKTDVLPSEVKG 590

Query: 183 KRNKSALFDAIILANQL--LELEMRWS 257
            R+KS LFDA  LA  +  LE E +WS
Sbjct: 591 DRSKSVLFDARRLAKSIESLEREKKWS 617


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