BLASTX nr result

ID: Coptis23_contig00017345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017345
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333207.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002333207.1| predicted protein [Populus trichocarpa] gi|222835096|gb|EEE73545.1|
           predicted protein [Populus trichocarpa]
          Length = 729

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   RPSMMPMM-GIWKIRYHDTCKEVKELFLKRDMRSRHQLGQAIDMLFGLPTDIRPAAVKGK 177
           +P+MM  + GI KIR+ DTC E +  F +RD+ S  + G A D + G+ T+++P  VKG 
Sbjct: 583 QPAMMAAVAGIGKIRFRDTCAEAERFFKRRDLGSNKEWG-ACDSILGVNTEVKPVDVKGD 641

Query: 178 QNKSALF 198
           ++KS LF
Sbjct: 642 RSKSVLF 648


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