BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017331
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [...   147   7e-34
ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communi...   136   2e-30
ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002886225.1| transducin family protein [Arabidopsis lyrat...   133   2e-29
ref|NP_671857.2| transducin/WD-40 repeat-containing protein [Ara...   132   3e-29

>ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera]
           gi|297744762|emb|CBI38024.3| unnamed protein product
           [Vitis vinifera]
          Length = 477

 Score =  147 bits (372), Expect = 7e-34
 Identities = 76/113 (67%), Positives = 83/113 (73%)
 Frame = +3

Query: 15  SHAPVRHRFEVESWSSSRDLRGLNQAXXXXXXXXXXXXXXXXXXXKVEPAYSFVGMHCIF 194
           S AP+   FEV+SWSSSRDLR   QA                   KVEPAYSFVGMHCIF
Sbjct: 103 SPAPLSLLFEVDSWSSSRDLRSGYQASSHRTSFSSSASDNDPPVRKVEPAYSFVGMHCIF 162

Query: 195 DTCKSSVTVLKFGRMSSDLLAYGASDGTLTVCSISQPPSIIKELRGHSKDVIE 353
           D CK+SVTVLKFG  SSDLLAYGA+DGTLTVC++SQPPSIIKELRGHSKDV +
Sbjct: 163 DQCKASVTVLKFGNKSSDLLAYGAADGTLTVCTVSQPPSIIKELRGHSKDVTD 215


>ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communis]
           gi|223547972|gb|EEF49464.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 500

 Score =  136 bits (342), Expect = 2e-30
 Identities = 68/116 (58%), Positives = 83/116 (71%)
 Frame = +3

Query: 6   QCFSHAPVRHRFEVESWSSSRDLRGLNQAXXXXXXXXXXXXXXXXXXXKVEPAYSFVGMH 185
           QC S  P+ H F+ ESWSSSR+L G   +                    VEPAYSFVGMH
Sbjct: 120 QCPS-PPLSHMFDAESWSSSRNLSGNLASTHRTSFSSSVSDNDRPRRRGVEPAYSFVGMH 178

Query: 186 CIFDTCKSSVTVLKFGRMSSDLLAYGASDGTLTVCSISQPPSIIKELRGHSKDVIE 353
           CIFD CKS+VTVLKFG MSS+LLAYGASDG+LTVC++S+PPS++K+L+GHSKDV +
Sbjct: 179 CIFDQCKSAVTVLKFGHMSSNLLAYGASDGSLTVCTVSEPPSVLKQLKGHSKDVTD 234


>ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|222849089|gb|EEE86636.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/114 (60%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
 Frame = +3

Query: 15  SHAPVRHRFEVESWSSSRDLRGLNQAXXXXXXXXXXXXXXXXXXXK-VEPAYSFVGMHCI 191
           S  P  H FEV+SW+SSRDLR  N                     +  EPAYSFVGMHCI
Sbjct: 127 STTPPSHLFEVDSWTSSRDLRSTNLPSTHRTSFSSTASDNDSLRRRGAEPAYSFVGMHCI 186

Query: 192 FDTCKSSVTVLKFGRMSSDLLAYGASDGTLTVCSISQPPSIIKELRGHSKDVIE 353
           FD CK++VTVLKFG MSSDLLAYGASDGTLTVC +S PPS+IK+L GHSKDV +
Sbjct: 187 FDQCKAAVTVLKFGHMSSDLLAYGASDGTLTVCLVSDPPSVIKKLEGHSKDVTD 240


>ref|XP_002886225.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332065|gb|EFH62484.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 482

 Score =  133 bits (334), Expect = 2e-29
 Identities = 68/115 (59%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
 Frame = +3

Query: 15  SHAPVRHRFEVESWSSSRDLRGLNQAXXXXXXXXXXXXXXXXXXXK--VEPAYSFVGMHC 188
           S +P+ H+FE ES++SSRDLR +NQ                    +  VE AYSFVGMHC
Sbjct: 107 SPSPLSHQFEAESFTSSRDLRSVNQVSSHRASFSSSLSDGDNSYRRGGVEHAYSFVGMHC 166

Query: 189 IFDTCKSSVTVLKFGRMSSDLLAYGASDGTLTVCSISQPPSIIKELRGHSKDVIE 353
           IFD CKSSVTVLKFG MSSDLLAYGASDG+LTVCS+ + PS++K+L GHSKDV +
Sbjct: 167 IFDQCKSSVTVLKFGHMSSDLLAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTD 221


>ref|NP_671857.2| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
           gi|111074218|gb|ABH04482.1| At2g16405 [Arabidopsis
           thaliana] gi|330251400|gb|AEC06494.1| transducin/WD-40
           repeat-containing protein [Arabidopsis thaliana]
          Length = 482

 Score =  132 bits (332), Expect = 3e-29
 Identities = 67/115 (58%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
 Frame = +3

Query: 15  SHAPVRHRFEVESWSSSRDLRGLNQAXXXXXXXXXXXXXXXXXXXK--VEPAYSFVGMHC 188
           S +P+ H+FE ES++SSRDLR +NQ                    +  VE AYSFVGMHC
Sbjct: 107 SPSPLSHQFEAESFTSSRDLRSVNQVSSRRASFSSSLSDGDNSYRRGGVEHAYSFVGMHC 166

Query: 189 IFDTCKSSVTVLKFGRMSSDLLAYGASDGTLTVCSISQPPSIIKELRGHSKDVIE 353
           IFD CKSSVTVLKFG MSSD+LAYGASDG+LTVCS+ + PS++K+L GHSKDV +
Sbjct: 167 IFDQCKSSVTVLKFGHMSSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTD 221