BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017308
         (1320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267236.1| PREDICTED: 5'-3' exonuclease-like [Vitis vin...   439   e-120
emb|CBI18184.3| unnamed protein product [Vitis vinifera]              439   e-120
gb|ABK93472.1| unknown [Populus trichocarpa]                          436   e-120
ref|XP_002327332.1| predicted protein [Populus trichocarpa] gi|2...   428   e-117
ref|XP_003548949.1| PREDICTED: 5'-3' exonuclease-like [Glycine max]   410   e-112

>ref|XP_002267236.1| PREDICTED: 5'-3' exonuclease-like [Vitis vinifera]
          Length = 366

 Score =  439 bits (1128), Expect = e-120
 Identities = 224/346 (64%), Positives = 261/346 (75%), Gaps = 4/346 (1%)
 Frame = +1

Query: 13   SFSLPWRTRTSPPPTNLTPALSCFPS----SIALYQPSGWRLAMCSNNKDNLTTSKKSRE 180
            S SLPW+   S     +T A +   S    + AL Q  G  L      +++     +S++
Sbjct: 13   SLSLPWKKLRSKTRLKITVADATGNSRGSFTWALNQTVGGLLLP---RRESCEEKVRSKK 69

Query: 181  RVFFLDVNPLCYNGSSPNLHSFAHWISLFFSQVSLTDPVIAVIDGEGGNEYRRKLLPSYK 360
            RVFFLDVNPLCY GS+P+LHSF HW+SLFF QVSL+DPVIAVIDGE  NEYR+KLLPSYK
Sbjct: 70   RVFFLDVNPLCYTGSTPSLHSFGHWVSLFFQQVSLSDPVIAVIDGERCNEYRQKLLPSYK 129

Query: 361  AHRRKLTTQFPPSHQFPRGVGEREHAIKDVLNKCNVPVVKVEGHEADDVIATLAEQALQN 540
            AHRRK + Q P         G     ++DVL KCNVPV+K+EG EADDV+ATL  Q LQ 
Sbjct: 130  AHRRKFSKQLPSQRFSSVSAGRSRQVVRDVLRKCNVPVLKIEGCEADDVVATLVGQVLQR 189

Query: 541  GTRVVIGSPDKDFKQLITEDLQIVMPMPELGRWSFYTLKHYIDQYTCDPSSDLSLRCILG 720
            G RVVI SPDKDFKQLI+E++QIVMPMPE GRWSFYTLKHYI QY CDP SDLSLRCI+G
Sbjct: 190  GYRVVIASPDKDFKQLISEEVQIVMPMPEFGRWSFYTLKHYIAQYNCDPCSDLSLRCIMG 249

Query: 721  DEVDGVPGIQHVAPGFGRKTALKLLKKHGSLECLLSAAKVRTVGKQYVQEALNKHADYLL 900
            DEVDGVPGIQHVAPGFGRKTALKLLKKHGSLE LL+AA VRTVG+QY Q AL K+AD+L 
Sbjct: 250  DEVDGVPGIQHVAPGFGRKTALKLLKKHGSLENLLNAAAVRTVGRQYAQNALTKYADFLR 309

Query: 901  KNYEVLSLRRDVGVHLDDEWLQKRETSNDAATLSEFARLLGEPQKL 1038
            +NYE+LSLRRDV V L++EWL  R++ ND+  LS F +LLGE QKL
Sbjct: 310  RNYEILSLRRDVDVQLEEEWLFDRDSRNDSVVLSNFFKLLGETQKL 355


>emb|CBI18184.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  439 bits (1128), Expect = e-120
 Identities = 224/346 (64%), Positives = 261/346 (75%), Gaps = 4/346 (1%)
 Frame = +1

Query: 13   SFSLPWRTRTSPPPTNLTPALSCFPS----SIALYQPSGWRLAMCSNNKDNLTTSKKSRE 180
            S SLPW+   S     +T A +   S    + AL Q  G  L      +++     +S++
Sbjct: 27   SLSLPWKKLRSKTRLKITVADATGNSRGSFTWALNQTVGGLLLP---RRESCEEKVRSKK 83

Query: 181  RVFFLDVNPLCYNGSSPNLHSFAHWISLFFSQVSLTDPVIAVIDGEGGNEYRRKLLPSYK 360
            RVFFLDVNPLCY GS+P+LHSF HW+SLFF QVSL+DPVIAVIDGE  NEYR+KLLPSYK
Sbjct: 84   RVFFLDVNPLCYTGSTPSLHSFGHWVSLFFQQVSLSDPVIAVIDGERCNEYRQKLLPSYK 143

Query: 361  AHRRKLTTQFPPSHQFPRGVGEREHAIKDVLNKCNVPVVKVEGHEADDVIATLAEQALQN 540
            AHRRK + Q P         G     ++DVL KCNVPV+K+EG EADDV+ATL  Q LQ 
Sbjct: 144  AHRRKFSKQLPSQRFSSVSAGRSRQVVRDVLRKCNVPVLKIEGCEADDVVATLVGQVLQR 203

Query: 541  GTRVVIGSPDKDFKQLITEDLQIVMPMPELGRWSFYTLKHYIDQYTCDPSSDLSLRCILG 720
            G RVVI SPDKDFKQLI+E++QIVMPMPE GRWSFYTLKHYI QY CDP SDLSLRCI+G
Sbjct: 204  GYRVVIASPDKDFKQLISEEVQIVMPMPEFGRWSFYTLKHYIAQYNCDPCSDLSLRCIMG 263

Query: 721  DEVDGVPGIQHVAPGFGRKTALKLLKKHGSLECLLSAAKVRTVGKQYVQEALNKHADYLL 900
            DEVDGVPGIQHVAPGFGRKTALKLLKKHGSLE LL+AA VRTVG+QY Q AL K+AD+L 
Sbjct: 264  DEVDGVPGIQHVAPGFGRKTALKLLKKHGSLENLLNAAAVRTVGRQYAQNALTKYADFLR 323

Query: 901  KNYEVLSLRRDVGVHLDDEWLQKRETSNDAATLSEFARLLGEPQKL 1038
            +NYE+LSLRRDV V L++EWL  R++ ND+  LS F +LLGE QKL
Sbjct: 324  RNYEILSLRRDVDVQLEEEWLFDRDSRNDSVVLSNFFKLLGETQKL 369


>gb|ABK93472.1| unknown [Populus trichocarpa]
          Length = 375

 Score =  436 bits (1120), Expect = e-120
 Identities = 222/348 (63%), Positives = 268/348 (77%), Gaps = 6/348 (1%)
 Frame = +1

Query: 10   PSFSLP-WRTRTSPPPTNLTPALSCFPS-SIALYQPSG---W-RLAMCSNNKDNLTTSKK 171
            PS S+  W  R  P  T      + F S S + +   G   W R  +C +NK+     + 
Sbjct: 23   PSASISTWNLRKKPRETTKRKLGAVFASISSSSHDTIGEELWPRSELCGSNKEK----RA 78

Query: 172  SRERVFFLDVNPLCYNGSSPNLHSFAHWISLFFSQVSLTDPVIAVIDGEGGNEYRRKLLP 351
            S++RVFFLDVNPLCY GS+P+LHSFAHWISLFFSQVSLTDPVIAV+DG+GG+E+RR+LLP
Sbjct: 79   SKKRVFFLDVNPLCYAGSTPSLHSFAHWISLFFSQVSLTDPVIAVLDGDGGSEHRRQLLP 138

Query: 352  SYKAHRRKLTTQFPPSHQFPRGVGEREHAIKDVLNKCNVPVVKVEGHEADDVIATLAEQA 531
            SYKAHRRK + +     ++P    ER H + DVL KCNVPVVK+EGHEADDV+ATLA Q 
Sbjct: 139  SYKAHRRKFSRKSSAPQKYP---AERSHVVMDVLTKCNVPVVKIEGHEADDVVATLAGQV 195

Query: 532  LQNGTRVVIGSPDKDFKQLITEDLQIVMPMPELGRWSFYTLKHYIDQYTCDPSSDLSLRC 711
            LQNG +VVI SPDKDFKQLI+ED+QIV+P+ EL RWSFYTLKHYI QY CDP SDLS RC
Sbjct: 196  LQNGHKVVIASPDKDFKQLISEDVQIVLPIAELNRWSFYTLKHYISQYNCDPCSDLSFRC 255

Query: 712  ILGDEVDGVPGIQHVAPGFGRKTALKLLKKHGSLECLLSAAKVRTVGKQYVQEALNKHAD 891
            I+GDEVDGVPGIQ+VAPGFGRKTALKLLKKHGSL+ LL AA VRTVGK+Y Q+AL KH+D
Sbjct: 256  IMGDEVDGVPGIQNVAPGFGRKTALKLLKKHGSLQNLLDAAAVRTVGKKYAQDALTKHSD 315

Query: 892  YLLKNYEVLSLRRDVGVHLDDEWLQKRETSNDAATLSEFARLLGEPQK 1035
            YL +NYE+L+LRRDV V L +EWL +R+  ND+  LS F +LL + ++
Sbjct: 316  YLRRNYEILALRRDVDVQLKEEWLVERDRCNDSIILSNFFKLLEQSKR 363


>ref|XP_002327332.1| predicted protein [Populus trichocarpa] gi|222835702|gb|EEE74137.1|
            predicted protein [Populus trichocarpa]
          Length = 368

 Score =  428 bits (1100), Expect = e-117
 Identities = 221/349 (63%), Positives = 267/349 (76%), Gaps = 7/349 (2%)
 Frame = +1

Query: 10   PSFSLP-WRTRTSPPPTNLTPALSCFPS-SIALYQPSG---W-RLAMCSNNKDNLTTSKK 171
            PS S+  W  R  P  T      + F S S + +   G   W R  +C +NK+     + 
Sbjct: 15   PSASISTWNLRKKPRETTKRKLGAVFASISSSSHDTIGEELWPRSELCGSNKEK----RA 70

Query: 172  SRERVFFLDVNPLCYNGSSPNLHSFAHWISLFFSQVSLTDPVIAVIDGEGGNEYRRKLLP 351
            S++RVFFLDVNPLCY GS+P+LHSFAHWISLFFSQVSLTDPVIAV+DG+GG+E+RR+LLP
Sbjct: 71   SKKRVFFLDVNPLCYAGSTPSLHSFAHWISLFFSQVSLTDPVIAVLDGDGGSEHRRQLLP 130

Query: 352  SYKAHRRKLTTQFPPSHQFPRGVGEREHAIKDVLNKCNVPVVKVEGHEADDVIATLAEQA 531
            SYKAHRRK + +     ++P    ER H + DVL KCNVPVVK+EGHEADDV+ATLA Q 
Sbjct: 131  SYKAHRRKFSRKSSAPQKYP---AERSHVVMDVLTKCNVPVVKIEGHEADDVVATLAGQV 187

Query: 532  LQNGTRVVIGSPDKDFKQLITEDLQIVMPMPELGRWSFYTLKHYIDQYTCDPSSDLSLRC 711
            LQN  +VVI SPDKDFKQLI+ED+QIV+P+ EL RWSFYTLKHYI QY CDP SDLS RC
Sbjct: 188  LQNRHKVVIASPDKDFKQLISEDVQIVLPIAELNRWSFYTLKHYISQYNCDPCSDLSFRC 247

Query: 712  ILGDEVDGVPGIQHVAPGFGRKTALKLLKKHGSLECLLSAAKVRTVGKQYVQEALNKHAD 891
            I+GDEVDGVPGIQ+VAPGFGRKTALKLLKKHGSL+ LL AA VRTVGK+Y Q+AL KH+D
Sbjct: 248  IMGDEVDGVPGIQNVAPGFGRKTALKLLKKHGSLQNLLDAAAVRTVGKKYAQDALTKHSD 307

Query: 892  YLLKNYEVLSLRR-DVGVHLDDEWLQKRETSNDAATLSEFARLLGEPQK 1035
            YL +NYE+L+LRR DV V L +EWL +R+  ND+  LS F +LL + ++
Sbjct: 308  YLRRNYEILALRRWDVDVQLKEEWLVERDRCNDSIILSNFFKLLEQSKR 356


>ref|XP_003548949.1| PREDICTED: 5'-3' exonuclease-like [Glycine max]
          Length = 368

 Score =  410 bits (1054), Expect = e-112
 Identities = 209/344 (60%), Positives = 248/344 (72%), Gaps = 10/344 (2%)
 Frame = +1

Query: 52   PTNLTPALSCF------PSSIALYQPSGWRLAMCSNNKDNLTTSK---KSRERVFFLDVN 204
            P N  P LS         +S+ +  P     A+ + + D    ++   + ++RVFFLDVN
Sbjct: 19   PCNYNPTLSASCRTQKTATSLTVTTPKKTEKALFTESFDQTRDAQPLPEKKKRVFFLDVN 78

Query: 205  PLCYNGSSPNLHSFAHWISLFFSQVSLTDPVIAVIDGEGGNEYRRKLLPSYKAHRRKLTT 384
            PLCY GS P+LHS   W+SLF  QVS TDPVIAVIDGE G+E+RRKLLPSYKAHRRK T 
Sbjct: 79   PLCYEGSKPSLHSLGRWLSLFLEQVSHTDPVIAVIDGERGSEHRRKLLPSYKAHRRKFTR 138

Query: 385  QFPPSHQFPRG-VGEREHAIKDVLNKCNVPVVKVEGHEADDVIATLAEQALQNGTRVVIG 561
                  +F  G VG     I DVL KCNVPV+KV+GHEADDV+ATLA Q L  G RVVI 
Sbjct: 139  HISSLQRFSSGHVGRSLQVINDVLGKCNVPVIKVDGHEADDVVATLAGQVLNKGFRVVIA 198

Query: 562  SPDKDFKQLITEDLQIVMPMPELGRWSFYTLKHYIDQYTCDPSSDLSLRCILGDEVDGVP 741
            SPDKDFKQLI++D+QIVMP+PEL RWSFYTL+HY DQY CDP SDLSLRCI+GDEVDGVP
Sbjct: 199  SPDKDFKQLISDDVQIVMPLPELQRWSFYTLRHYRDQYNCDPESDLSLRCIVGDEVDGVP 258

Query: 742  GIQHVAPGFGRKTALKLLKKHGSLECLLSAAKVRTVGKQYVQEALNKHADYLLKNYEVLS 921
            GIQH+ P FGRKTALKL+KKHGSLE LL+AA +RTVG+ Y Q+AL  HADYL +NYEVL+
Sbjct: 259  GIQHLVPSFGRKTALKLIKKHGSLETLLNAAAIRTVGRPYAQDALKNHADYLRRNYEVLA 318

Query: 922  LRRDVGVHLDDEWLQKRETSNDAATLSEFARLLGEPQKLKEPKR 1053
            L+RDV V L +EWL KR+  ND   LS F + L E ++L    R
Sbjct: 319  LKRDVNVQLIEEWLIKRDNRNDKIALSAFFKYLEESKELTNSGR 362