BLASTX nr result

ID: Coptis23_contig00017298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017298
         (1908 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329013.1| predicted protein [Populus trichocarpa] gi|2...   419   e-114
ref|XP_002263706.1| PREDICTED: haloalkane dehalogenase [Vitis vi...   408   e-111
ref|NP_175660.2| alpha/beta-hydrolase domain-containing protein ...   407   e-111
ref|XP_002894382.1| hydrolase, alpha/beta fold family protein [A...   407   e-111
ref|XP_004135862.1| PREDICTED: haloalkane dehalogenase 1-like [C...   407   e-111

>ref|XP_002329013.1| predicted protein [Populus trichocarpa] gi|222839684|gb|EEE78007.1|
            predicted protein [Populus trichocarpa]
          Length = 338

 Score =  419 bits (1078), Expect = e-114
 Identities = 202/255 (79%), Positives = 224/255 (87%), Gaps = 4/255 (1%)
 Frame = -3

Query: 1903 NTDDNNKK----PAFNPFGFVTDNPSSRAAIQLPESPAEDGNVGQMLYRIEDXXXXXXXX 1736
            N+  +N+K    PAFNPFGFVTDNPSSR++IQLPESPAEDGNVGQMLYRIED        
Sbjct: 4    NSSQDNEKDKDAPAFNPFGFVTDNPSSRSSIQLPESPAEDGNVGQMLYRIEDKGKENGSY 63

Query: 1735 XXXXKLRWFVRETGSSESRRGTVVFLHGAPTQSYSYRVVMAQMENAGFHCYAPDWIGFGF 1556
                +L WFVRETGS +SRRGT++FLHGAP QSYSYRVVM+QM +AGFHC+APDWIGFGF
Sbjct: 64   VKSGELIWFVRETGSPDSRRGTIIFLHGAPAQSYSYRVVMSQMSDAGFHCFAPDWIGFGF 123

Query: 1555 SDQPQPGYGFDYTEEEFHVEFDKLLGVLGIESPFFLVVQGFLVGSYGLTWALKNSSRVSK 1376
            SD+PQPGYGFDYTE+EFH   DKLL VLG++SPFFLVVQGFLVGSYGLTWALKN S++SK
Sbjct: 124  SDKPQPGYGFDYTEKEFHEALDKLLDVLGVKSPFFLVVQGFLVGSYGLTWALKNKSKISK 183

Query: 1375 LVILNTPLTVGSPIPGLFQQLRIPLFGEFTCQNAVMAERFIEAGSAYVLKLEKADVYRLP 1196
            L ILN+P+TV SP+PGLFQQLRIPL+GEFTCQNAVMAERFIEAGS YVLKLEKADVYRLP
Sbjct: 184  LAILNSPVTVSSPVPGLFQQLRIPLYGEFTCQNAVMAERFIEAGSPYVLKLEKADVYRLP 243

Query: 1195 YLASSGPGFALLETA 1151
            YLASSGPGFALLE A
Sbjct: 244  YLASSGPGFALLEAA 258



 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 33/38 (86%), Positives = 35/38 (92%)
 Frame = -2

Query: 1010 EEFQKGNPTIVKLKLIEGAGHMPQEDWPEKVVDSLRMF 897
            EEFQKGNP  VKLKLIEGAGHMPQEDWPEKVV +LR+F
Sbjct: 300  EEFQKGNPNAVKLKLIEGAGHMPQEDWPEKVVYALRVF 337


>ref|XP_002263706.1| PREDICTED: haloalkane dehalogenase [Vitis vinifera]
            gi|297743495|emb|CBI36362.3| unnamed protein product
            [Vitis vinifera]
          Length = 383

 Score =  408 bits (1048), Expect = e-111
 Identities = 195/249 (78%), Positives = 216/249 (86%)
 Frame = -3

Query: 1897 DDNNKKPAFNPFGFVTDNPSSRAAIQLPESPAEDGNVGQMLYRIEDXXXXXXXXXXXXKL 1718
            +     PAFNPFGFVTDNPSSR+AIQLPESPAEDGNVGQMLYRIED            + 
Sbjct: 55   EQGKDSPAFNPFGFVTDNPSSRSAIQLPESPAEDGNVGQMLYRIEDKGKEYGSYIRSGEF 114

Query: 1717 RWFVRETGSSESRRGTVVFLHGAPTQSYSYRVVMAQMENAGFHCYAPDWIGFGFSDQPQP 1538
             WFVRETGS +SRRGT++FLHGAPTQSYSYRVVM+QM + GFHC+APDWIGFGFS++P  
Sbjct: 115  VWFVRETGSPDSRRGTIIFLHGAPTQSYSYRVVMSQMSDVGFHCFAPDWIGFGFSEKPYS 174

Query: 1537 GYGFDYTEEEFHVEFDKLLGVLGIESPFFLVVQGFLVGSYGLTWALKNSSRVSKLVILNT 1358
            GYGFDYTE+EFH EFDKLL VL ++SPF LVVQGFLVGS+GLTWALKN SR+SKL ILN+
Sbjct: 175  GYGFDYTEKEFHDEFDKLLDVLEVKSPFLLVVQGFLVGSFGLTWALKNPSRISKLAILNS 234

Query: 1357 PLTVGSPIPGLFQQLRIPLFGEFTCQNAVMAERFIEAGSAYVLKLEKADVYRLPYLASSG 1178
            PLT  SP+PGLFQ+LRIPL+GEFTCQNAVMAERFIEAGSAYVLKLEKADVYRLPYL+SSG
Sbjct: 235  PLTASSPVPGLFQKLRIPLYGEFTCQNAVMAERFIEAGSAYVLKLEKADVYRLPYLSSSG 294

Query: 1177 PGFALLETA 1151
            PGFALLE A
Sbjct: 295  PGFALLEAA 303



 Score = 74.7 bits (182), Expect = 8e-11
 Identities = 33/38 (86%), Positives = 35/38 (92%)
 Frame = -2

Query: 1010 EEFQKGNPTIVKLKLIEGAGHMPQEDWPEKVVDSLRMF 897
            EEFQKGNP  +KLKLIEGAGHMPQEDWPEKVVD+LR F
Sbjct: 345  EEFQKGNPDYIKLKLIEGAGHMPQEDWPEKVVDALRAF 382


>ref|NP_175660.2| alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana]
            gi|17528996|gb|AAL38708.1| unknown protein [Arabidopsis
            thaliana] gi|21436161|gb|AAM51368.1| unknown protein
            [Arabidopsis thaliana] gi|51968998|dbj|BAD43191.1|
            unknown protein [Arabidopsis thaliana]
            gi|51971086|dbj|BAD44235.1| unknown protein [Arabidopsis
            thaliana] gi|332194695|gb|AEE32816.1|
            alpha/beta-hydrolase domain-containing protein
            [Arabidopsis thaliana]
          Length = 380

 Score =  407 bits (1047), Expect = e-111
 Identities = 193/249 (77%), Positives = 219/249 (87%)
 Frame = -3

Query: 1897 DDNNKKPAFNPFGFVTDNPSSRAAIQLPESPAEDGNVGQMLYRIEDXXXXXXXXXXXXKL 1718
            +D ++ P+FNPFGFVTDNPSSR+AIQLPESPAEDGNVGQMLYR ED            KL
Sbjct: 52   NDRDEDPSFNPFGFVTDNPSSRSAIQLPESPAEDGNVGQMLYRTEDKGKEYGSTIKSGKL 111

Query: 1717 RWFVRETGSSESRRGTVVFLHGAPTQSYSYRVVMAQMENAGFHCYAPDWIGFGFSDQPQP 1538
            RWFVRETGS ESRRGT+VF+HGAPTQS+SYR VM+++ +AGFHC+APDWIGFGFSD+PQP
Sbjct: 112  RWFVRETGSKESRRGTIVFVHGAPTQSFSYRTVMSELSDAGFHCFAPDWIGFGFSDKPQP 171

Query: 1537 GYGFDYTEEEFHVEFDKLLGVLGIESPFFLVVQGFLVGSYGLTWALKNSSRVSKLVILNT 1358
            GYGF+YTE+E+H  FDKLL VL ++SPFFLVVQGFLVGSYGLTWALKN S+V KL ILN+
Sbjct: 172  GYGFNYTEKEYHEAFDKLLEVLEVKSPFFLVVQGFLVGSYGLTWALKNPSKVEKLAILNS 231

Query: 1357 PLTVGSPIPGLFQQLRIPLFGEFTCQNAVMAERFIEAGSAYVLKLEKADVYRLPYLASSG 1178
            PLTV SP+PGLF+QLRIPLFGEFTCQNA++AERFIE GS YVLK EKADVYRLPYL+S G
Sbjct: 232  PLTVSSPVPGLFKQLRIPLFGEFTCQNAILAERFIEGGSPYVLKNEKADVYRLPYLSSGG 291

Query: 1177 PGFALLETA 1151
            PGFALLETA
Sbjct: 292  PGFALLETA 300



 Score = 64.7 bits (156), Expect = 8e-08
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -2

Query: 1010 EEFQKGNPTIVKLKLIEGAGHMPQEDWPEKVVDSLRMF 897
            EEF+K NP  VKL+LIEGAGH+PQEDWPEKVV +LR F
Sbjct: 342  EEFEKQNPQNVKLRLIEGAGHLPQEDWPEKVVAALRAF 379


>ref|XP_002894382.1| hydrolase, alpha/beta fold family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297340224|gb|EFH70641.1| hydrolase, alpha/beta
            fold family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 380

 Score =  407 bits (1047), Expect = e-111
 Identities = 193/248 (77%), Positives = 218/248 (87%)
 Frame = -3

Query: 1894 DNNKKPAFNPFGFVTDNPSSRAAIQLPESPAEDGNVGQMLYRIEDXXXXXXXXXXXXKLR 1715
            D ++ P+FNPFGFVTDNPSSR+AIQLPESPAEDGNVGQMLYR ED            KLR
Sbjct: 53   DRDEDPSFNPFGFVTDNPSSRSAIQLPESPAEDGNVGQMLYRTEDKGKEYGSIIKSGKLR 112

Query: 1714 WFVRETGSSESRRGTVVFLHGAPTQSYSYRVVMAQMENAGFHCYAPDWIGFGFSDQPQPG 1535
            WFVRETGS ESRRGT+VF+HGAPTQS+SYR VM++M +AGFHC+APDWIGFGFSD+PQPG
Sbjct: 113  WFVRETGSKESRRGTIVFVHGAPTQSFSYRTVMSEMSDAGFHCFAPDWIGFGFSDKPQPG 172

Query: 1534 YGFDYTEEEFHVEFDKLLGVLGIESPFFLVVQGFLVGSYGLTWALKNSSRVSKLVILNTP 1355
            YGF+YTE+E+H  FDKLL VL ++SPFFLVVQGFLVGSYGLTWALKN S+V K+ ILN+P
Sbjct: 173  YGFNYTEKEYHEAFDKLLEVLEVKSPFFLVVQGFLVGSYGLTWALKNPSKVEKIAILNSP 232

Query: 1354 LTVGSPIPGLFQQLRIPLFGEFTCQNAVMAERFIEAGSAYVLKLEKADVYRLPYLASSGP 1175
            LTV SP+PGLF+QLRIPLFGEFTCQNA++AERFIE GS YVLK EKADVYRLPYL+S GP
Sbjct: 233  LTVSSPVPGLFKQLRIPLFGEFTCQNAILAERFIEGGSPYVLKNEKADVYRLPYLSSGGP 292

Query: 1174 GFALLETA 1151
            GFALLETA
Sbjct: 293  GFALLETA 300



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -2

Query: 1010 EEFQKGNPTIVKLKLIEGAGHMPQEDWPEKVVDSLRMF 897
            EEF+K NP  VKL+LIEGAGH+PQEDWPEKVV +LR F
Sbjct: 342  EEFEKLNPQNVKLRLIEGAGHLPQEDWPEKVVAALRAF 379


>ref|XP_004135862.1| PREDICTED: haloalkane dehalogenase 1-like [Cucumis sativus]
            gi|449491053|ref|XP_004158785.1| PREDICTED: haloalkane
            dehalogenase 1-like [Cucumis sativus]
          Length = 387

 Score =  407 bits (1046), Expect = e-111
 Identities = 196/249 (78%), Positives = 216/249 (86%)
 Frame = -3

Query: 1897 DDNNKKPAFNPFGFVTDNPSSRAAIQLPESPAEDGNVGQMLYRIEDXXXXXXXXXXXXKL 1718
            D +     FNPFGFVTDNPSSR+AIQLPESPAEDGNVGQMLYRIED            K 
Sbjct: 59   DGDADSTGFNPFGFVTDNPSSRSAIQLPESPAEDGNVGQMLYRIEDKGKEYGSYVKAGKF 118

Query: 1717 RWFVRETGSSESRRGTVVFLHGAPTQSYSYRVVMAQMENAGFHCYAPDWIGFGFSDQPQP 1538
            RWFVRETGS++SRRGT+VFLHGAPTQSYSYRVVM+++   GFHC+APDWIGFGFSD+PQP
Sbjct: 119  RWFVRETGSAKSRRGTIVFLHGAPTQSYSYRVVMSELSAFGFHCFAPDWIGFGFSDKPQP 178

Query: 1537 GYGFDYTEEEFHVEFDKLLGVLGIESPFFLVVQGFLVGSYGLTWALKNSSRVSKLVILNT 1358
            GYGF+YTE+E+H   DKLL +LGI +PF LV+QGFLVGSYGLTWALKN SR+SK+ ILNT
Sbjct: 179  GYGFNYTEKEYHEALDKLLDMLGINTPFNLVIQGFLVGSYGLTWALKNQSRISKISILNT 238

Query: 1357 PLTVGSPIPGLFQQLRIPLFGEFTCQNAVMAERFIEAGSAYVLKLEKADVYRLPYLASSG 1178
            PLTV SP+PGLFQQLRIPLFGEFTCQNAVMAERFIEAGSAYVLKLEKADVYRLPYL+S G
Sbjct: 239  PLTVSSPVPGLFQQLRIPLFGEFTCQNAVMAERFIEAGSAYVLKLEKADVYRLPYLSSGG 298

Query: 1177 PGFALLETA 1151
            PGFALLE A
Sbjct: 299  PGFALLEAA 307



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = -2

Query: 1010 EEFQKGNPTIVKLKLIEGAGHMPQEDWPEKVVDSLRMF 897
            EEFQK N T ++LKLIEGAGHMPQEDWPEKV+++LR F
Sbjct: 349  EEFQKQNSTTIQLKLIEGAGHMPQEDWPEKVIEALRSF 386


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