BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017297
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523406.1| RNA binding protein, putative [Ricinus commu...   162   3e-38
emb|CBI29938.3| unnamed protein product [Vitis vinifera]              152   3e-35
ref|XP_002276886.1| PREDICTED: uncharacterized protein LOC100250...   152   3e-35
emb|CAN81897.1| hypothetical protein VITISV_009053 [Vitis vinifera]   152   3e-35
ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vi...   149   2e-34

>ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
           gi|223537356|gb|EEF38985.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 771

 Score =  162 bits (409), Expect = 3e-38
 Identities = 81/135 (60%), Positives = 101/135 (74%), Gaps = 1/135 (0%)
 Frame = +2

Query: 14  SIGGDESLYHVN-NEKVLPDDHFHHRSPILNSRSFPLDDQTSPGSSPDSVDLKFYNLRSQ 190
           S GG+ESL +++ N KVL + H  H     ++  F LD  +S   SPD +DLK  NLR Q
Sbjct: 354 SAGGNESLANLSQNGKVLLNGHLRHTLTPPSAECFQLDHLSSWDLSPDIIDLKSTNLRPQ 413

Query: 191 SPKYNSLDEVKGRIYLIAKDQHGCRFLQKKFTEGCAEDVDKIFTEIIGHIVELMTDPFGN 370
             KYNS+DEV GR+YL+AKDQHGCRFLQ+KF+EG  +D++KIF E+I HI ELMTDPFGN
Sbjct: 414 PQKYNSVDEVTGRVYLMAKDQHGCRFLQRKFSEGTPQDIEKIFLEVIDHIAELMTDPFGN 473

Query: 371 YLVQKLLEVCTKDQK 415
           YLVQKLLEVC +DQ+
Sbjct: 474 YLVQKLLEVCNEDQR 488


>emb|CBI29938.3| unnamed protein product [Vitis vinifera]
          Length = 714

 Score =  152 bits (384), Expect = 3e-35
 Identities = 72/123 (58%), Positives = 96/123 (78%)
 Frame = +2

Query: 47  NNEKVLPDDHFHHRSPILNSRSFPLDDQTSPGSSPDSVDLKFYNLRSQSPKYNSLDEVKG 226
           +N +++ + HF+H + I+ +RS P+D +       D+ D +  NLR Q+ KYNS+DEV G
Sbjct: 339 SNGRMISNGHFYHNAHIVGTRSSPVDGRKYWPQPLDTKDSRHDNLRLQTRKYNSVDEVTG 398

Query: 227 RIYLIAKDQHGCRFLQKKFTEGCAEDVDKIFTEIIGHIVELMTDPFGNYLVQKLLEVCTK 406
           RIYL+AKDQ GCRFLQ+K TEG AED++KIF EI+GH+VELMT PFGNYLVQKLLEVC++
Sbjct: 399 RIYLMAKDQSGCRFLQRKMTEGNAEDIEKIFLEIVGHVVELMTHPFGNYLVQKLLEVCSE 458

Query: 407 DQK 415
           DQ+
Sbjct: 459 DQR 461


>ref|XP_002276886.1| PREDICTED: uncharacterized protein LOC100250413 [Vitis vinifera]
          Length = 815

 Score =  152 bits (384), Expect = 3e-35
 Identities = 72/123 (58%), Positives = 96/123 (78%)
 Frame = +2

Query: 47  NNEKVLPDDHFHHRSPILNSRSFPLDDQTSPGSSPDSVDLKFYNLRSQSPKYNSLDEVKG 226
           +N +++ + HF+H + I+ +RS P+D +       D+ D +  NLR Q+ KYNS+DEV G
Sbjct: 440 SNGRMISNGHFYHNAHIVGTRSSPVDGRKYWPQPLDTKDSRHDNLRLQTRKYNSVDEVTG 499

Query: 227 RIYLIAKDQHGCRFLQKKFTEGCAEDVDKIFTEIIGHIVELMTDPFGNYLVQKLLEVCTK 406
           RIYL+AKDQ GCRFLQ+K TEG AED++KIF EI+GH+VELMT PFGNYLVQKLLEVC++
Sbjct: 500 RIYLMAKDQSGCRFLQRKMTEGNAEDIEKIFLEIVGHVVELMTHPFGNYLVQKLLEVCSE 559

Query: 407 DQK 415
           DQ+
Sbjct: 560 DQR 562


>emb|CAN81897.1| hypothetical protein VITISV_009053 [Vitis vinifera]
          Length = 815

 Score =  152 bits (384), Expect = 3e-35
 Identities = 72/123 (58%), Positives = 96/123 (78%)
 Frame = +2

Query: 47  NNEKVLPDDHFHHRSPILNSRSFPLDDQTSPGSSPDSVDLKFYNLRSQSPKYNSLDEVKG 226
           +N +++ + HF+H + I+ +RS P+D +       D+ D +  NLR Q+ KYNS+DEV G
Sbjct: 440 SNGRMISNGHFYHNAHIVGTRSSPVDGRKYWPQPLDTKDSRHDNLRLQTRKYNSVDEVTG 499

Query: 227 RIYLIAKDQHGCRFLQKKFTEGCAEDVDKIFTEIIGHIVELMTDPFGNYLVQKLLEVCTK 406
           RIYL+AKDQ GCRFLQ+K TEG AED++KIF EI+GH+VELMT PFGNYLVQKLLEVC++
Sbjct: 500 RIYLMAKDQSGCRFLQRKMTEGNAEDIEKIFLEIVGHVVELMTHPFGNYLVQKLLEVCSE 559

Query: 407 DQK 415
           DQ+
Sbjct: 560 DQR 562


>ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera]
          Length = 711

 Score =  149 bits (377), Expect = 2e-34
 Identities = 80/136 (58%), Positives = 96/136 (70%), Gaps = 1/136 (0%)
 Frame = +2

Query: 11  GSIGGDESLYHVN-NEKVLPDDHFHHRSPILNSRSFPLDDQTSPGSSPDSVDLKFYNLRS 187
           GSI  +E+  HVN N +V+P+ HF  R     +    LD   +   S D+  LK   LR 
Sbjct: 325 GSIRENEAGTHVNQNGRVIPNGHFRQRLSSPTAGHLQLDSLCTWSLSTDTAHLKTNILRP 384

Query: 188 QSPKYNSLDEVKGRIYLIAKDQHGCRFLQKKFTEGCAEDVDKIFTEIIGHIVELMTDPFG 367
           Q  KYNS+DEV GRIY ++KDQ+GCRFLQ+KFT+G  EDV KIF EII HIVELMTDPFG
Sbjct: 385 QPQKYNSVDEVVGRIYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFG 444

Query: 368 NYLVQKLLEVCTKDQK 415
           NYLVQKLLEVCT+DQ+
Sbjct: 445 NYLVQKLLEVCTEDQQ 460