BLASTX nr result

ID: Coptis23_contig00017295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017295
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283267.1| PREDICTED: uncharacterized protein LOC100254...   152   3e-35
ref|XP_002306753.1| predicted protein [Populus trichocarpa] gi|2...   147   9e-34
ref|XP_002302134.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_002520368.1| conserved hypothetical protein [Ricinus comm...   133   1e-29
ref|XP_003561472.1| PREDICTED: uncharacterized protein LOC100838...   132   3e-29

>ref|XP_002283267.1| PREDICTED: uncharacterized protein LOC100254120 [Vitis vinifera]
           gi|302143523|emb|CBI22084.3| unnamed protein product
           [Vitis vinifera]
          Length = 500

 Score =  152 bits (384), Expect = 3e-35
 Identities = 79/118 (66%), Positives = 98/118 (83%), Gaps = 1/118 (0%)
 Frame = +3

Query: 3   SVKDREGLLAYVNALQAQVKRQQSDTK-QVLEERMESCSDTIDSLPLTKHVDLSDENVDK 179
           +VK+++ LLAYVN LQAQ++RQQ DTK QV EE+ ESCSD  ++ PLTKHVDLSDENVDK
Sbjct: 360 AVKEKQELLAYVNMLQAQLQRQQIDTKKQVFEEKTESCSDIGNTRPLTKHVDLSDENVDK 419

Query: 180 ACLSDSRSIPVSRDGVVQLDVDQVHPRSIGDGEWSDIQATDSRISDVREIMPEATGTS 353
           ACLS SR++PV  + VV L +DQV+ R +GDGEWSDIQAT++RI+DVREI PE  G+S
Sbjct: 420 ACLSVSRAVPVG-ENVVHLAMDQVNLRPVGDGEWSDIQATEARIADVREIAPETEGSS 476


>ref|XP_002306753.1| predicted protein [Populus trichocarpa] gi|222856202|gb|EEE93749.1|
           predicted protein [Populus trichocarpa]
          Length = 501

 Score =  147 bits (371), Expect = 9e-34
 Identities = 72/117 (61%), Positives = 93/117 (79%)
 Frame = +3

Query: 3   SVKDREGLLAYVNALQAQVKRQQSDTKQVLEERMESCSDTIDSLPLTKHVDLSDENVDKA 182
           +VK++E LLAYVN LQAQ++RQ  DTKQV +E+ME+ +    +LPLTKHVDLSDENVDKA
Sbjct: 361 AVKEKEELLAYVNMLQAQLQRQHKDTKQVFKEKMETPNVVDSTLPLTKHVDLSDENVDKA 420

Query: 183 CLSDSRSIPVSRDGVVQLDVDQVHPRSIGDGEWSDIQATDSRISDVREIMPEATGTS 353
           CLS SR++P + + VV + VDQ +PR + D EWSDIQAT+S I+DVRE+ PE  G+S
Sbjct: 421 CLSVSRAVPAAGENVVHMAVDQSNPRPVEDAEWSDIQATESTIADVREVAPEIDGSS 477


>ref|XP_002302134.1| predicted protein [Populus trichocarpa] gi|222843860|gb|EEE81407.1|
           predicted protein [Populus trichocarpa]
          Length = 501

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/117 (59%), Positives = 91/117 (77%)
 Frame = +3

Query: 3   SVKDREGLLAYVNALQAQVKRQQSDTKQVLEERMESCSDTIDSLPLTKHVDLSDENVDKA 182
           +VK++E LLAY N LQAQ++RQ  DT+QV EE+ E+ +    +LPLTKHVD+SDENVDKA
Sbjct: 361 AVKEKEELLAYANVLQAQLQRQHLDTEQVFEEKTETPNVVGRTLPLTKHVDMSDENVDKA 420

Query: 183 CLSDSRSIPVSRDGVVQLDVDQVHPRSIGDGEWSDIQATDSRISDVREIMPEATGTS 353
           CLS SR++P S + VV + VDQ +PR + D EWSDIQAT+S I+DVRE+ PE  G+S
Sbjct: 421 CLSVSRAVPASGESVVHMAVDQSNPRPVEDAEWSDIQATESTIADVREVAPETEGSS 477


>ref|XP_002520368.1| conserved hypothetical protein [Ricinus communis]
           gi|223540415|gb|EEF41984.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 499

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/117 (58%), Positives = 90/117 (76%)
 Frame = +3

Query: 3   SVKDREGLLAYVNALQAQVKRQQSDTKQVLEERMESCSDTIDSLPLTKHVDLSDENVDKA 182
           +V +++ LLAYVN LQAQ++RQ  DT+QV E + ES +   ++LPLTKHVDLS+ NVDKA
Sbjct: 360 AVNEKQELLAYVNMLQAQLQRQHIDTQQVFE-KAESSNAVGNTLPLTKHVDLSEANVDKA 418

Query: 183 CLSDSRSIPVSRDGVVQLDVDQVHPRSIGDGEWSDIQATDSRISDVREIMPEATGTS 353
           CLS SR +PVS + VV + VDQ + + IGD EWSDIQ T+SRI+DV+EI PE  G+S
Sbjct: 419 CLSVSRVLPVSEESVVDMGVDQANLQPIGDTEWSDIQPTESRIADVKEIAPETEGSS 475


>ref|XP_003561472.1| PREDICTED: uncharacterized protein LOC100838255 [Brachypodium
           distachyon]
          Length = 500

 Score =  132 bits (332), Expect = 3e-29
 Identities = 69/116 (59%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
 Frame = +3

Query: 9   KDREGLLAYVNALQAQVKRQQSDTKQVLEERMESCSDTIDSLPLTKHVDLSDENVDKACL 188
           K++E LLA +  LQ+QV+R+QS TKQV EER ESCS   +S PLTKHVD SD++VDKAC+
Sbjct: 363 KEKEELLALIGVLQSQVQREQSSTKQVCEERSESCSGADNSPPLTKHVDASDDDVDKACV 422

Query: 189 SDSRSIPVSRDGV-VQLDVDQVHPRSIGDGEWSDIQATDSRISDVREIMPEATGTS 353
           SDSRS+ VS D   VQL VD V  R IGD EW   Q +++ I+DVRE+ PEA G+S
Sbjct: 423 SDSRSVLVSNDSTEVQLAVDGVDIRPIGDAEWGGFQQSEALIADVREVSPEAEGSS 478


Top