BLASTX nr result

ID: Coptis23_contig00017283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017283
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    55   8e-06
gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japo...    55   8e-06

>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/69 (34%), Positives = 42/69 (60%)
 Frame = +1

Query: 241 PITATSASMMSWNCRGLGTPATIQNLKDLIRQHEADVIYLSETKATYSSIRTISKKIKFG 420
           P  A + S ++WNCRGLG  AT+Q+L+ LI++  + +++L ET+ +   +  + +K+ F 
Sbjct: 630 PGAAGAMSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFR 689

Query: 421 GVFSVPGVG 447
           G   V   G
Sbjct: 690 GFVGVSSEG 698


>gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japonica Group]
          Length = 1170

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/60 (38%), Positives = 35/60 (58%)
 Frame = +1

Query: 268 MSWNCRGLGTPATIQNLKDLIRQHEADVIYLSETKATYSSIRTISKKIKFGGVFSVPGVG 447
           +SWNCRGLG P  +Q L  +++ H   V++LSET+     +  I  +I   G  +V G+G
Sbjct: 95  LSWNCRGLGRPRAVQELVCMVQTHRPKVVFLSETRQNQGFVENIKWQIGLRGCLAVNGIG 154


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