BLASTX nr result

ID: Coptis23_contig00017279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017279
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera]   226   3e-57
ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis v...   226   4e-57
ref|XP_002298127.1| 2-oxoglutarate-dependent dioxygenase [Populu...   216   4e-54
ref|XP_002298131.1| 2-oxoglutarate-dependent dioxygenase [Populu...   213   4e-53
emb|CAN77851.1| hypothetical protein VITISV_030994 [Vitis vinifera]   212   5e-53

>emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera]
          Length = 311

 Score =  226 bits (576), Expect = 3e-57
 Identities = 109/193 (56%), Positives = 137/193 (70%), Gaps = 12/193 (6%)
 Frame = -2

Query: 673 GNPSFC------------MEQMVKRMVCESFNVEQYYDTLEESTYYLLRVMNYRAPRMNE 530
           GN  FC            +EQMVK+MV ES++ E+YYD+  +ST YLLR++ YR P+ NE
Sbjct: 119 GNDHFCETVLSYSKLVSELEQMVKKMVFESYDAEKYYDSHIQSTTYLLRLIKYRGPQKNE 178

Query: 529 TNVGLFPHTDKTFITVLSQNQVNGLEIQAKDGDWIGVTPGASSFVVMIGDAFMAWSNGRL 350
           T +G   HTDK+FITVL QN+V GLEI+ KDG+WI   P  SS+VVM GDA +AWSNGR+
Sbjct: 179 TCIGTSCHTDKSFITVLHQNEVCGLEIRTKDGEWISFKPSPSSYVVMAGDALLAWSNGRI 238

Query: 349 YCPPHRVRMNGGNTRYSMGLFSFSKGIVQTPEELVDEEHPLLFKPFDHMGLRHFVNTREG 170
           + P HRV MNG   RYS+GLF++ +GI++ PEEL DEEHPL FKPF+H GL HF  T + 
Sbjct: 239 HSPEHRVIMNGNKARYSIGLFAYHRGIIEIPEELADEEHPLQFKPFNHYGLLHFYFTNKA 298

Query: 169 PKDESVIKAYCGV 131
            + ES  KAYCGV
Sbjct: 299 GQTESTAKAYCGV 311


>ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis vinifera]
           gi|297743336|emb|CBI36203.3| unnamed protein product
           [Vitis vinifera]
          Length = 311

 Score =  226 bits (575), Expect = 4e-57
 Identities = 109/193 (56%), Positives = 137/193 (70%), Gaps = 12/193 (6%)
 Frame = -2

Query: 673 GNPSFC------------MEQMVKRMVCESFNVEQYYDTLEESTYYLLRVMNYRAPRMNE 530
           GN  FC            +EQMVK+MV ES++ E+YYD+  +ST YLLR++ YR P+ NE
Sbjct: 119 GNDHFCETVLSYSKLVSELEQMVKKMVFESYDAEKYYDSHIQSTTYLLRLIKYRGPQKNE 178

Query: 529 TNVGLFPHTDKTFITVLSQNQVNGLEIQAKDGDWIGVTPGASSFVVMIGDAFMAWSNGRL 350
           T +G   HTDK+FITVL QN+V GLEI+ KDG+WI   P  SS+VVM GDA +AWSNGR+
Sbjct: 179 TCIGTSCHTDKSFITVLHQNEVCGLEIRTKDGEWISFKPSPSSYVVMAGDALLAWSNGRI 238

Query: 349 YCPPHRVRMNGGNTRYSMGLFSFSKGIVQTPEELVDEEHPLLFKPFDHMGLRHFVNTREG 170
           + P HRV MNG   RYS+GLF++ +GI++ PEEL DEEHPL FKPF+H GL HF  T + 
Sbjct: 239 HSPEHRVIMNGNKARYSIGLFAYHRGIIEIPEELADEEHPLQFKPFNHYGLLHFYFTNKA 298

Query: 169 PKDESVIKAYCGV 131
            + ES  KAYCGV
Sbjct: 299 GQAESTAKAYCGV 311


>ref|XP_002298127.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
           gi|222845385|gb|EEE82932.1| 2-oxoglutarate-dependent
           dioxygenase [Populus trichocarpa]
          Length = 313

 Score =  216 bits (549), Expect = 4e-54
 Identities = 106/194 (54%), Positives = 135/194 (69%), Gaps = 12/194 (6%)
 Frame = -2

Query: 676 DGNPSFC------------MEQMVKRMVCESFNVEQYYDTLEESTYYLLRVMNYRAPRMN 533
           +GN  FC            +++MV RMV ES+ VE+Y+D+  EST YLLR++  R P+++
Sbjct: 120 NGNDRFCECVLKYANLAAELDRMVTRMVFESYGVEKYHDSYVESTTYLLRLLKNRPPKVD 179

Query: 532 ETNVGLFPHTDKTFITVLSQNQVNGLEIQAKDGDWIGVTPGASSFVVMIGDAFMAWSNGR 353
           E N+G   HTDK+F T+L QN++NGLE+  KDG  I V    SSFVV+ GDA MAWSN R
Sbjct: 180 EHNLGFVTHTDKSFTTILHQNEINGLEVDTKDGKKINVELSPSSFVVIAGDALMAWSNDR 239

Query: 352 LYCPPHRVRMNGGNTRYSMGLFSFSKGIVQTPEELVDEEHPLLFKPFDHMGLRHFVNTRE 173
           +  P HRV MNG   RYS+ LF+F+KGI+Q PEELVDEEHPL++KP DH+GL HF  T E
Sbjct: 240 VISPSHRVIMNGKIDRYSLALFAFNKGILQVPEELVDEEHPLMYKPLDHIGLLHFYRTEE 299

Query: 172 GPKDESVIKAYCGV 131
           G K +  IKAYCGV
Sbjct: 300 GYKSKCPIKAYCGV 313


>ref|XP_002298131.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
           gi|222845389|gb|EEE82936.1| 2-oxoglutarate-dependent
           dioxygenase [Populus trichocarpa]
          Length = 313

 Score =  213 bits (541), Expect = 4e-53
 Identities = 105/193 (54%), Positives = 133/193 (68%), Gaps = 12/193 (6%)
 Frame = -2

Query: 673 GNPSFC------------MEQMVKRMVCESFNVEQYYDTLEESTYYLLRVMNYRAPRMNE 530
           GN  FC            +EQMV RMV ES+ V Q++D+ +EST YL R+M YR P  NE
Sbjct: 121 GNDHFCKTVLSYSMLVSELEQMVVRMVFESYGVYQHHDSHKESTTYLFRMMKYRGPEKNE 180

Query: 529 TNVGLFPHTDKTFITVLSQNQVNGLEIQAKDGDWIGVTPGASSFVVMIGDAFMAWSNGRL 350
            NVG   HTDK+FITVL QNQV+GLE+++KDG W+G  P  SSF+VM G+A + WSN R+
Sbjct: 181 ANVGCDAHTDKSFITVLHQNQVSGLEVKSKDGQWMGFKPSPSSFIVMAGEALLGWSNDRI 240

Query: 349 YCPPHRVRMNGGNTRYSMGLFSFSKGIVQTPEELVDEEHPLLFKPFDHMGLRHFVNTREG 170
             P HRV M+    RYS+GLFSF KGI++ PE+L+DE++PL FKPF++ GL  +  T EG
Sbjct: 241 NAPFHRVVMSESEPRYSVGLFSFIKGIIKVPEKLIDEKNPLRFKPFENFGLLRYFFTEEG 300

Query: 169 PKDESVIKAYCGV 131
              ES IKAYCGV
Sbjct: 301 RGKESTIKAYCGV 313


>emb|CAN77851.1| hypothetical protein VITISV_030994 [Vitis vinifera]
          Length = 317

 Score =  212 bits (540), Expect = 5e-53
 Identities = 100/193 (51%), Positives = 134/193 (69%), Gaps = 12/193 (6%)
 Frame = -2

Query: 673 GNPSFC------------MEQMVKRMVCESFNVEQYYDTLEESTYYLLRVMNYRAPRMNE 530
           GN  FC            ++ +V +M+ ES+ V +YYD+  E   YLLRV+ ++AP++ E
Sbjct: 120 GNDHFCEITREFSKIALELDHLVTKMIFESYGVGKYYDSHLEPMSYLLRVLKHKAPKVKE 179

Query: 529 TNVGLFPHTDKTFITVLSQNQVNGLEIQAKDGDWIGVTPGASSFVVMIGDAFMAWSNGRL 350
            N+G   HTDK+FITVL QNQV GLE++ KDG+WI +    SSF V+ GDA +AWSNGRL
Sbjct: 180 PNLGFARHTDKSFITVLYQNQVKGLEVETKDGEWISLELSPSSFAVIAGDALVAWSNGRL 239

Query: 349 YCPPHRVRMNGGNTRYSMGLFSFSKGIVQTPEELVDEEHPLLFKPFDHMGLRHFVNTREG 170
           + P H+V M+G   RYS+GLF FS G++Q PEEL D+EHPL FK FDH+GL  F +T EG
Sbjct: 240 HSPYHKVMMSGNEERYSLGLFQFSSGMIQIPEELGDDEHPLQFKSFDHLGLLRFFHTEEG 299

Query: 169 PKDESVIKAYCGV 131
            K +S+IK+YCG+
Sbjct: 300 QKSKSLIKSYCGI 312


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