BLASTX nr result

ID: Coptis23_contig00017271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017271
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161414.1| PREDICTED: LOW QUALITY PROTEIN: telomerase r...   103   2e-20
ref|XP_004149615.1| PREDICTED: telomerase reverse transcriptase-...   103   2e-20
gb|AFG16840.1| telomerase reverse transcriptase variant C, parti...   102   4e-20
gb|AFG16839.1| telomerase reverse transcriptase variant C, parti...   102   4e-20
gb|AEB33870.1| telomerase reverse transcriptase, partial [Nicoti...   102   4e-20

>ref|XP_004161414.1| PREDICTED: LOW QUALITY PROTEIN: telomerase reverse transcriptase-like
            [Cucumis sativus]
          Length = 1146

 Score =  103 bits (257), Expect = 2e-20
 Identities = 46/64 (71%), Positives = 55/64 (85%)
 Frame = +3

Query: 3    RTLEIQADYTRYLDIHVSSTLTVQWQNKPSCHLKDKLCSYLQPKCHPIFYDSNINSATTV 182
            +TLEIQADYT+YL+ H+SS+LTV WQ KP  +LK+KLC YL+PKCHPIFYD NIN+A  V
Sbjct: 955  QTLEIQADYTKYLNNHLSSSLTVSWQGKPGHNLKEKLCDYLRPKCHPIFYDMNINTAAVV 1014

Query: 183  RLNI 194
            RLNI
Sbjct: 1015 RLNI 1018



 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
 Frame = +2

Query: 326  MIMSSLRYMHRLIRRRIFTVNGTGV-HPVLHLKKIEVLWLGLKAYIRVLEKKQPRHSRLL 502
            +I+ SLRYM  LI+ ++ ++    +  P L L   EV WLGL AY++VL +KQ RH+RLL
Sbjct: 1050 IILRSLRYMDVLIKNKMSSIQLDSLPRPSLQLADREVEWLGLNAYVQVLTRKQARHTRLL 1109

Query: 503  YLLRSEML 526
             LL+S +L
Sbjct: 1110 SLLKSRLL 1117


>ref|XP_004149615.1| PREDICTED: telomerase reverse transcriptase-like [Cucumis sativus]
          Length = 1146

 Score =  103 bits (257), Expect = 2e-20
 Identities = 46/64 (71%), Positives = 55/64 (85%)
 Frame = +3

Query: 3    RTLEIQADYTRYLDIHVSSTLTVQWQNKPSCHLKDKLCSYLQPKCHPIFYDSNINSATTV 182
            +TLEIQADYT+YL+ H+SS+LTV WQ KP  +LK+KLC YL+PKCHPIFYD NIN+A  V
Sbjct: 955  QTLEIQADYTKYLNNHLSSSLTVSWQGKPGHNLKEKLCDYLRPKCHPIFYDMNINTAAVV 1014

Query: 183  RLNI 194
            RLNI
Sbjct: 1015 RLNI 1018



 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
 Frame = +2

Query: 326  MIMSSLRYMHRLIRRRIFTVNGTGV-HPVLHLKKIEVLWLGLKAYIRVLEKKQPRHSRLL 502
            +I+ SLRYM  LI+ ++ ++    +  P L L   EV WLGL AY++VL +KQ RH+RLL
Sbjct: 1050 IILRSLRYMDVLIKNKMSSIQLDSLPRPSLQLADREVEWLGLNAYVQVLTRKQARHTRLL 1109

Query: 503  YLLRSEML 526
             LL+S +L
Sbjct: 1110 SLLKSRLL 1117


>gb|AFG16840.1| telomerase reverse transcriptase variant C, partial [Nicotiana
           tomentosiformis]
          Length = 673

 Score =  102 bits (254), Expect = 4e-20
 Identities = 49/63 (77%), Positives = 52/63 (82%)
 Frame = +3

Query: 6   TLEIQADYTRYLDIHVSSTLTVQWQNKPSCHLKDKLCSYLQPKCHPIFYDSNINSATTVR 185
           TLEIQADYTRYL+  +SSTLTV W NKP   LK KLC YL+PKCHPIFYDSNINSA  VR
Sbjct: 483 TLEIQADYTRYLNFPLSSTLTVGWLNKPGRDLKVKLCGYLRPKCHPIFYDSNINSAAVVR 542

Query: 186 LNI 194
           LNI
Sbjct: 543 LNI 545



 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = +2

Query: 338 SLRYMHRLIRRRIFTVN-GTGVHPVLHLKKIEVLWLGLKAYIRVLEKKQPRHSRLLYLLR 514
           SLRYM +LI+RR+F+   G    P+L L K E+ WLGL AYIRVL++KQ R+  LL +L 
Sbjct: 581 SLRYMKKLIKRRMFSFKTGLDCRPILELGKGEIEWLGLTAYIRVLKRKQSRYKELLRVLD 640

Query: 515 SEMLGFLEVES 547
           S+++   + ES
Sbjct: 641 SKLMALGKQES 651


>gb|AFG16839.1| telomerase reverse transcriptase variant C, partial [Nicotiana
           sylvestris]
          Length = 347

 Score =  102 bits (254), Expect = 4e-20
 Identities = 49/63 (77%), Positives = 52/63 (82%)
 Frame = +3

Query: 6   TLEIQADYTRYLDIHVSSTLTVQWQNKPSCHLKDKLCSYLQPKCHPIFYDSNINSATTVR 185
           TLEIQADYTRYL+  +SSTLTV W NKP   LK KLC YL+PKCHPIFYDSNINSA  VR
Sbjct: 157 TLEIQADYTRYLNFPLSSTLTVGWLNKPGRDLKVKLCGYLRPKCHPIFYDSNINSAAVVR 216

Query: 186 LNI 194
           LNI
Sbjct: 217 LNI 219



 Score = 65.1 bits (157), Expect = 8e-09
 Identities = 34/71 (47%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
 Frame = +2

Query: 338 SLRYMHRLIRRRIFTVN-GTGVHPVLHLKKIEVLWLGLKAYIRVLEKKQPRHSRLLYLLR 514
           SLRYM +LI+RR+F+   G+   P+L + K E+ WLGL AYIRVL++KQ R+  LL +L 
Sbjct: 255 SLRYMTKLIKRRMFSFKTGSDFRPILEVGKGEIEWLGLTAYIRVLKRKQSRYKELLRVLD 314

Query: 515 SEMLGFLEVES 547
           S+++   + ES
Sbjct: 315 SKLMALGKQES 325


>gb|AEB33870.1| telomerase reverse transcriptase, partial [Nicotiana tabacum]
          Length = 673

 Score =  102 bits (254), Expect = 4e-20
 Identities = 49/63 (77%), Positives = 52/63 (82%)
 Frame = +3

Query: 6   TLEIQADYTRYLDIHVSSTLTVQWQNKPSCHLKDKLCSYLQPKCHPIFYDSNINSATTVR 185
           TLEIQADYTRYL+  +SSTLTV W NKP   LK KLC YL+PKCHPIFYDSNINSA  VR
Sbjct: 483 TLEIQADYTRYLNFPLSSTLTVGWLNKPGRDLKVKLCGYLRPKCHPIFYDSNINSAAVVR 542

Query: 186 LNI 194
           LNI
Sbjct: 543 LNI 545



 Score = 65.1 bits (157), Expect = 8e-09
 Identities = 34/71 (47%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
 Frame = +2

Query: 338 SLRYMHRLIRRRIFTVN-GTGVHPVLHLKKIEVLWLGLKAYIRVLEKKQPRHSRLLYLLR 514
           SLRYM +LI+RR+F+   G+   P+L + K E+ WLGL AYIRVL++KQ R+  LL +L 
Sbjct: 581 SLRYMTKLIKRRMFSFKTGSDFRPILEVGKGEIEWLGLTAYIRVLKRKQSRYKELLRVLD 640

Query: 515 SEMLGFLEVES 547
           S+++   + ES
Sbjct: 641 SKLMALGKQES 651


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