BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017261
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542905.1| PREDICTED: putative E3 ubiquitin-protein lig...    65   6e-09
ref|XP_002516824.1| conserved hypothetical protein [Ricinus comm...    62   4e-08
ref|XP_003528662.1| PREDICTED: putative E3 ubiquitin-protein lig...    59   5e-07
ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein lig...    58   7e-07
ref|XP_003550520.1| PREDICTED: putative E3 ubiquitin-protein lig...    57   1e-06

>ref|XP_003542905.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
           max]
          Length = 883

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/79 (44%), Positives = 48/79 (60%)
 Frame = +1

Query: 199 SIFKAGSSGILATIVVQETGSRNKRKFLSDLPLIDPNEAPGSPPHYVCIGNEFSGEELQD 378
           S+  +GSS +  ++ VQE GSRNKRKF +D PL +PN+   SP H   + NEFS E+ + 
Sbjct: 3   SLVASGSSQMAPSVSVQEKGSRNKRKFRADPPLGEPNKIIPSPQH-ESLSNEFSAEKFEI 61

Query: 379 IAIHDQYGLCDMCGCSRDN 435
              H Q    DMC  S+D+
Sbjct: 62  TTGHGQASASDMCSVSQDH 80


>ref|XP_002516824.1| conserved hypothetical protein [Ricinus communis]
           gi|223543912|gb|EEF45438.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 894

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/73 (42%), Positives = 45/73 (61%)
 Frame = +1

Query: 217 SSGILATIVVQETGSRNKRKFLSDLPLIDPNEAPGSPPHYVCIGNEFSGEELQDIAIHDQ 396
           S+ + + + VQE GSRNKRKF +D PL DP +   SP +  C G EFS E+ +    H  
Sbjct: 14  STQVSSLVSVQEKGSRNKRKFRADTPLGDPGKIIPSPQN-ECSGYEFSAEKFEATPAHGP 72

Query: 397 YGLCDMCGCSRDN 435
             +CD+CG ++D+
Sbjct: 73  SSVCDLCGVNQDH 85


>ref|XP_003528662.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
           max]
          Length = 890

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/79 (40%), Positives = 44/79 (55%)
 Frame = +1

Query: 196 VSIFKAGSSGILATIVVQETGSRNKRKFLSDLPLIDPNEAPGSPPHYVCIGNEFSGEELQ 375
           +S+  + SS +  ++  QE GSRNKRKF  D PL +PN+   + P   C   EFS E  +
Sbjct: 2   ISLVASCSSQMSPSVSCQEKGSRNKRKFRVDPPLGEPNKFIPA-PQLKCFSYEFSAERFE 60

Query: 376 DIAIHDQYGLCDMCGCSRD 432
               H Q   CD+CG S+D
Sbjct: 61  ITPGHGQAAACDLCGVSQD 79


>ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Vitis
           vinifera]
          Length = 893

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/67 (43%), Positives = 40/67 (59%)
 Frame = +1

Query: 235 TIVVQETGSRNKRKFLSDLPLIDPNEAPGSPPHYVCIGNEFSGEELQDIAIHDQYGLCDM 414
           ++  QE GSRNKRKF +D PL DPN+   S     C+  EFS E+ +  + H Q G C M
Sbjct: 19  SVSAQEKGSRNKRKFRADPPLGDPNKIVSSQDQ--CLSYEFSAEKFEVTSSHGQPGACGM 76

Query: 415 CGCSRDN 435
           C  ++D+
Sbjct: 77  CNLNQDH 83


>ref|XP_003550520.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
           max]
          Length = 877

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/63 (46%), Positives = 39/63 (61%)
 Frame = +1

Query: 247 QETGSRNKRKFLSDLPLIDPNEAPGSPPHYVCIGNEFSGEELQDIAIHDQYGLCDMCGCS 426
           QE GSRNKRKF +D PL +PN+   +P    C+  EFS E+ +    H Q   CD+CG S
Sbjct: 8   QEKGSRNKRKFRADPPLGEPNKFIPAP-QLECLSYEFSAEKFEITPGHRQVAACDLCGLS 66

Query: 427 RDN 435
           +D+
Sbjct: 67  QDH 69