BLASTX nr result

ID: Coptis23_contig00017249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017249
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF22900.1|AC006932_17 T27G7.17 [Arabidopsis thaliana]              87   7e-28
ref|NP_172325.2| cysteine desulfurase 2 [Arabidopsis thaliana] g...    87   7e-28
ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloropla...    84   7e-28
emb|CAN74051.1| hypothetical protein VITISV_014856 [Vitis vinifera]    84   7e-28
ref|XP_002892460.1| hypothetical protein ARALYDRAFT_470910 [Arab...    87   1e-27

>gb|AAF22900.1|AC006932_17 T27G7.17 [Arabidopsis thaliana]
          Length = 526

 Score = 87.4 bits (215), Expect(2) = 7e-28
 Identities = 41/56 (73%), Positives = 51/56 (91%)
 Frame = -3

Query: 910 DEYESARIKVSRFINASESTEIVFSQNATEAMNLVAYSWDLLNLRPGDEIILTIAD 743
           DE+E AR KV+RFINAS+S EIVF++NATEA+NLVAYSW L NL+PGDE+ILT+A+
Sbjct: 116 DEFELARKKVARFINASDSREIVFTRNATEAINLVAYSWGLSNLKPGDEVILTVAE 171



 Score = 63.5 bits (153), Expect(2) = 7e-28
 Identities = 32/55 (58%), Positives = 37/55 (67%)
 Frame = -2

Query: 743 HHSVIVPFQIVAQKTGATLKFVSLTEEEVPDIDXXXXXXXXXXXLVVTHHFSNTL 579
           HHS IVP+QIV+QKTGA LKFV+L E+EVPDI+           LV  HH SN L
Sbjct: 172 HHSCIVPWQIVSQKTGAVLKFVTLNEDEVPDINKLRELISPKTKLVAVHHVSNVL 226


>ref|NP_172325.2| cysteine desulfurase 2 [Arabidopsis thaliana]
           gi|75249321|sp|Q93WX6.1|NFS2_ARATH RecName:
           Full=Cysteine desulfurase 2, chloroplastic; AltName:
           Full=NIFS-like protein; AltName: Full=Plastid sufS-like
           protein; AltName: Full=Protein AtCpNifS; AltName:
           Full=Selenocysteine lyase; Flags: Precursor
           gi|16152176|gb|AAL14994.1|AF419347_1 NIFS-like protein
           CpNifsp precursor [Arabidopsis thaliana]
           gi|20453112|gb|AAM19798.1| At1g08490/T27G7_14
           [Arabidopsis thaliana] gi|23506185|gb|AAN31104.1|
           At1g08490/T27G7_14 [Arabidopsis thaliana]
           gi|27085243|gb|AAL79956.1| cysteine desulfurase
           [Arabidopsis thaliana] gi|332190177|gb|AEE28298.1|
           cysteine desulfurase 2 [Arabidopsis thaliana]
          Length = 463

 Score = 87.4 bits (215), Expect(2) = 7e-28
 Identities = 41/56 (73%), Positives = 51/56 (91%)
 Frame = -3

Query: 910 DEYESARIKVSRFINASESTEIVFSQNATEAMNLVAYSWDLLNLRPGDEIILTIAD 743
           DE+E AR KV+RFINAS+S EIVF++NATEA+NLVAYSW L NL+PGDE+ILT+A+
Sbjct: 116 DEFELARKKVARFINASDSREIVFTRNATEAINLVAYSWGLSNLKPGDEVILTVAE 171



 Score = 63.5 bits (153), Expect(2) = 7e-28
 Identities = 32/55 (58%), Positives = 37/55 (67%)
 Frame = -2

Query: 743 HHSVIVPFQIVAQKTGATLKFVSLTEEEVPDIDXXXXXXXXXXXLVVTHHFSNTL 579
           HHS IVP+QIV+QKTGA LKFV+L E+EVPDI+           LV  HH SN L
Sbjct: 172 HHSCIVPWQIVSQKTGAVLKFVTLNEDEVPDINKLRELISPKTKLVAVHHVSNVL 226


>ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloroplastic [Vitis vinifera]
           gi|296083920|emb|CBI24308.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score = 84.3 bits (207), Expect(2) = 7e-28
 Identities = 40/56 (71%), Positives = 49/56 (87%)
 Frame = -3

Query: 910 DEYESARIKVSRFINASESTEIVFSQNATEAMNLVAYSWDLLNLRPGDEIILTIAD 743
           DEYESAR KV+ FINASE  EI+F++NATEA+NLVAYSW L NL+P DEI+LT+A+
Sbjct: 116 DEYESARRKVAAFINASEPGEIIFTRNATEAINLVAYSWGLSNLKPEDEIVLTVAE 171



 Score = 66.6 bits (161), Expect(2) = 7e-28
 Identities = 32/55 (58%), Positives = 39/55 (70%)
 Frame = -2

Query: 743 HHSVIVPFQIVAQKTGATLKFVSLTEEEVPDIDXXXXXXXXXXXLVVTHHFSNTL 579
           HHS IVP+Q+VAQKTGA LKFV+LTE+EVPD++           L+V HH SN L
Sbjct: 172 HHSAIVPWQLVAQKTGAILKFVNLTEDEVPDVEKLKEMISRKTKLLVVHHISNVL 226


>emb|CAN74051.1| hypothetical protein VITISV_014856 [Vitis vinifera]
          Length = 427

 Score = 84.3 bits (207), Expect(2) = 7e-28
 Identities = 40/56 (71%), Positives = 49/56 (87%)
 Frame = -3

Query: 910 DEYESARIKVSRFINASESTEIVFSQNATEAMNLVAYSWDLLNLRPGDEIILTIAD 743
           DEYESAR KV+ FINASE  EI+F++NATEA+NLVAYSW L NL+P DEI+LT+A+
Sbjct: 11  DEYESARRKVAAFINASEPGEIIFTRNATEAINLVAYSWGLSNLKPEDEIVLTVAE 66



 Score = 66.6 bits (161), Expect(2) = 7e-28
 Identities = 32/55 (58%), Positives = 39/55 (70%)
 Frame = -2

Query: 743 HHSVIVPFQIVAQKTGATLKFVSLTEEEVPDIDXXXXXXXXXXXLVVTHHFSNTL 579
           HHS IVP+Q+VAQKTGA LKFV+LTE+EVPD++           L+V HH SN L
Sbjct: 67  HHSAIVPWQLVAQKTGAILKFVNLTEDEVPDVEKLKEMISRKTKLLVVHHISNVL 121


>ref|XP_002892460.1| hypothetical protein ARALYDRAFT_470910 [Arabidopsis lyrata subsp.
           lyrata] gi|297338302|gb|EFH68719.1| hypothetical protein
           ARALYDRAFT_470910 [Arabidopsis lyrata subsp. lyrata]
          Length = 466

 Score = 87.4 bits (215), Expect(2) = 1e-27
 Identities = 41/56 (73%), Positives = 51/56 (91%)
 Frame = -3

Query: 910 DEYESARIKVSRFINASESTEIVFSQNATEAMNLVAYSWDLLNLRPGDEIILTIAD 743
           DE+E AR KV+RFINAS+S EIVF++NATEA+NLVAYSW L NL+PGDE+ILT+A+
Sbjct: 119 DEFELARKKVARFINASDSREIVFTRNATEAINLVAYSWGLSNLKPGDEVILTVAE 174



 Score = 62.8 bits (151), Expect(2) = 1e-27
 Identities = 31/55 (56%), Positives = 37/55 (67%)
 Frame = -2

Query: 743 HHSVIVPFQIVAQKTGATLKFVSLTEEEVPDIDXXXXXXXXXXXLVVTHHFSNTL 579
           HHS IVP+QIV+QKTGA LKFV+L ++EVPDI+           LV  HH SN L
Sbjct: 175 HHSCIVPWQIVSQKTGAVLKFVTLNDDEVPDIEKLREMISPKTKLVAVHHVSNVL 229


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