BLASTX nr result
ID: Coptis23_contig00017249
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00017249 (915 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF22900.1|AC006932_17 T27G7.17 [Arabidopsis thaliana] 87 7e-28 ref|NP_172325.2| cysteine desulfurase 2 [Arabidopsis thaliana] g... 87 7e-28 ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloropla... 84 7e-28 emb|CAN74051.1| hypothetical protein VITISV_014856 [Vitis vinifera] 84 7e-28 ref|XP_002892460.1| hypothetical protein ARALYDRAFT_470910 [Arab... 87 1e-27 >gb|AAF22900.1|AC006932_17 T27G7.17 [Arabidopsis thaliana] Length = 526 Score = 87.4 bits (215), Expect(2) = 7e-28 Identities = 41/56 (73%), Positives = 51/56 (91%) Frame = -3 Query: 910 DEYESARIKVSRFINASESTEIVFSQNATEAMNLVAYSWDLLNLRPGDEIILTIAD 743 DE+E AR KV+RFINAS+S EIVF++NATEA+NLVAYSW L NL+PGDE+ILT+A+ Sbjct: 116 DEFELARKKVARFINASDSREIVFTRNATEAINLVAYSWGLSNLKPGDEVILTVAE 171 Score = 63.5 bits (153), Expect(2) = 7e-28 Identities = 32/55 (58%), Positives = 37/55 (67%) Frame = -2 Query: 743 HHSVIVPFQIVAQKTGATLKFVSLTEEEVPDIDXXXXXXXXXXXLVVTHHFSNTL 579 HHS IVP+QIV+QKTGA LKFV+L E+EVPDI+ LV HH SN L Sbjct: 172 HHSCIVPWQIVSQKTGAVLKFVTLNEDEVPDINKLRELISPKTKLVAVHHVSNVL 226 >ref|NP_172325.2| cysteine desulfurase 2 [Arabidopsis thaliana] gi|75249321|sp|Q93WX6.1|NFS2_ARATH RecName: Full=Cysteine desulfurase 2, chloroplastic; AltName: Full=NIFS-like protein; AltName: Full=Plastid sufS-like protein; AltName: Full=Protein AtCpNifS; AltName: Full=Selenocysteine lyase; Flags: Precursor gi|16152176|gb|AAL14994.1|AF419347_1 NIFS-like protein CpNifsp precursor [Arabidopsis thaliana] gi|20453112|gb|AAM19798.1| At1g08490/T27G7_14 [Arabidopsis thaliana] gi|23506185|gb|AAN31104.1| At1g08490/T27G7_14 [Arabidopsis thaliana] gi|27085243|gb|AAL79956.1| cysteine desulfurase [Arabidopsis thaliana] gi|332190177|gb|AEE28298.1| cysteine desulfurase 2 [Arabidopsis thaliana] Length = 463 Score = 87.4 bits (215), Expect(2) = 7e-28 Identities = 41/56 (73%), Positives = 51/56 (91%) Frame = -3 Query: 910 DEYESARIKVSRFINASESTEIVFSQNATEAMNLVAYSWDLLNLRPGDEIILTIAD 743 DE+E AR KV+RFINAS+S EIVF++NATEA+NLVAYSW L NL+PGDE+ILT+A+ Sbjct: 116 DEFELARKKVARFINASDSREIVFTRNATEAINLVAYSWGLSNLKPGDEVILTVAE 171 Score = 63.5 bits (153), Expect(2) = 7e-28 Identities = 32/55 (58%), Positives = 37/55 (67%) Frame = -2 Query: 743 HHSVIVPFQIVAQKTGATLKFVSLTEEEVPDIDXXXXXXXXXXXLVVTHHFSNTL 579 HHS IVP+QIV+QKTGA LKFV+L E+EVPDI+ LV HH SN L Sbjct: 172 HHSCIVPWQIVSQKTGAVLKFVTLNEDEVPDINKLRELISPKTKLVAVHHVSNVL 226 >ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloroplastic [Vitis vinifera] gi|296083920|emb|CBI24308.3| unnamed protein product [Vitis vinifera] Length = 463 Score = 84.3 bits (207), Expect(2) = 7e-28 Identities = 40/56 (71%), Positives = 49/56 (87%) Frame = -3 Query: 910 DEYESARIKVSRFINASESTEIVFSQNATEAMNLVAYSWDLLNLRPGDEIILTIAD 743 DEYESAR KV+ FINASE EI+F++NATEA+NLVAYSW L NL+P DEI+LT+A+ Sbjct: 116 DEYESARRKVAAFINASEPGEIIFTRNATEAINLVAYSWGLSNLKPEDEIVLTVAE 171 Score = 66.6 bits (161), Expect(2) = 7e-28 Identities = 32/55 (58%), Positives = 39/55 (70%) Frame = -2 Query: 743 HHSVIVPFQIVAQKTGATLKFVSLTEEEVPDIDXXXXXXXXXXXLVVTHHFSNTL 579 HHS IVP+Q+VAQKTGA LKFV+LTE+EVPD++ L+V HH SN L Sbjct: 172 HHSAIVPWQLVAQKTGAILKFVNLTEDEVPDVEKLKEMISRKTKLLVVHHISNVL 226 >emb|CAN74051.1| hypothetical protein VITISV_014856 [Vitis vinifera] Length = 427 Score = 84.3 bits (207), Expect(2) = 7e-28 Identities = 40/56 (71%), Positives = 49/56 (87%) Frame = -3 Query: 910 DEYESARIKVSRFINASESTEIVFSQNATEAMNLVAYSWDLLNLRPGDEIILTIAD 743 DEYESAR KV+ FINASE EI+F++NATEA+NLVAYSW L NL+P DEI+LT+A+ Sbjct: 11 DEYESARRKVAAFINASEPGEIIFTRNATEAINLVAYSWGLSNLKPEDEIVLTVAE 66 Score = 66.6 bits (161), Expect(2) = 7e-28 Identities = 32/55 (58%), Positives = 39/55 (70%) Frame = -2 Query: 743 HHSVIVPFQIVAQKTGATLKFVSLTEEEVPDIDXXXXXXXXXXXLVVTHHFSNTL 579 HHS IVP+Q+VAQKTGA LKFV+LTE+EVPD++ L+V HH SN L Sbjct: 67 HHSAIVPWQLVAQKTGAILKFVNLTEDEVPDVEKLKEMISRKTKLLVVHHISNVL 121 >ref|XP_002892460.1| hypothetical protein ARALYDRAFT_470910 [Arabidopsis lyrata subsp. lyrata] gi|297338302|gb|EFH68719.1| hypothetical protein ARALYDRAFT_470910 [Arabidopsis lyrata subsp. lyrata] Length = 466 Score = 87.4 bits (215), Expect(2) = 1e-27 Identities = 41/56 (73%), Positives = 51/56 (91%) Frame = -3 Query: 910 DEYESARIKVSRFINASESTEIVFSQNATEAMNLVAYSWDLLNLRPGDEIILTIAD 743 DE+E AR KV+RFINAS+S EIVF++NATEA+NLVAYSW L NL+PGDE+ILT+A+ Sbjct: 119 DEFELARKKVARFINASDSREIVFTRNATEAINLVAYSWGLSNLKPGDEVILTVAE 174 Score = 62.8 bits (151), Expect(2) = 1e-27 Identities = 31/55 (56%), Positives = 37/55 (67%) Frame = -2 Query: 743 HHSVIVPFQIVAQKTGATLKFVSLTEEEVPDIDXXXXXXXXXXXLVVTHHFSNTL 579 HHS IVP+QIV+QKTGA LKFV+L ++EVPDI+ LV HH SN L Sbjct: 175 HHSCIVPWQIVSQKTGAVLKFVTLNDDEVPDIEKLREMISPKTKLVAVHHVSNVL 229