BLASTX nr result

ID: Coptis23_contig00017247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017247
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17902.3| unnamed protein product [Vitis vinifera]              107   3e-21
ref|XP_002263344.1| PREDICTED: uncharacterized protein LOC100263...   107   3e-21
ref|XP_002530843.1| conserved hypothetical protein [Ricinus comm...   103   7e-20
ref|XP_002314010.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-17
ref|XP_002298459.1| predicted protein [Populus trichocarpa] gi|2...    93   1e-16

>emb|CBI17902.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  107 bits (268), Expect = 3e-21
 Identities = 67/141 (47%), Positives = 87/141 (61%), Gaps = 13/141 (9%)
 Frame = -1

Query: 883 SSADINSEGRWKVAKAWNPCPIGMLPCALGSTGVLPVLDRVVILPEVQKLP----GGKES 716
           ++ D  +  RW VAK+WNPCPIGMLP ALGS+G LP LD      + QK+P      +E 
Sbjct: 411 TNGDDGNHSRWVVAKSWNPCPIGMLPRALGSSGRLPALDH----NDNQKMPPESSERREL 466

Query: 715 WEWNTCS---GMTYDVGLLEKTNAIEERNAVED-----GQADDPDL-LLNPVKGQLMIGG 563
           WE   CS      +D+ +L+ ++  + R  VED       +DD D+ L   VKGQL+I G
Sbjct: 467 WELKHCSRKREACFDIEMLDNSSVKKMRETVEDQTIEGHDSDDKDVTLCEGVKGQLLING 526

Query: 562 VYKKVWAEELLAIESAVRILV 500
           V+KKV  EELLAI+SAVRILV
Sbjct: 527 VWKKVEREELLAIKSAVRILV 547


>ref|XP_002263344.1| PREDICTED: uncharacterized protein LOC100263330 [Vitis vinifera]
          Length = 597

 Score =  107 bits (268), Expect = 3e-21
 Identities = 67/141 (47%), Positives = 87/141 (61%), Gaps = 13/141 (9%)
 Frame = -1

Query: 883 SSADINSEGRWKVAKAWNPCPIGMLPCALGSTGVLPVLDRVVILPEVQKLP----GGKES 716
           ++ D  +  RW VAK+WNPCPIGMLP ALGS+G LP LD      + QK+P      +E 
Sbjct: 461 TNGDDGNHSRWVVAKSWNPCPIGMLPRALGSSGRLPALDH----NDNQKMPPESSERREL 516

Query: 715 WEWNTCS---GMTYDVGLLEKTNAIEERNAVED-----GQADDPDL-LLNPVKGQLMIGG 563
           WE   CS      +D+ +L+ ++  + R  VED       +DD D+ L   VKGQL+I G
Sbjct: 517 WELKHCSRKREACFDIEMLDNSSVKKMRETVEDQTIEGHDSDDKDVTLCEGVKGQLLING 576

Query: 562 VYKKVWAEELLAIESAVRILV 500
           V+KKV  EELLAI+SAVRILV
Sbjct: 577 VWKKVEREELLAIKSAVRILV 597


>ref|XP_002530843.1| conserved hypothetical protein [Ricinus communis]
           gi|223529607|gb|EEF31556.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 589

 Score =  103 bits (256), Expect = 7e-20
 Identities = 61/150 (40%), Positives = 83/150 (55%), Gaps = 22/150 (14%)
 Frame = -1

Query: 883 SSADINSEGRWKVAKAWNPCPIGMLPCALGSTGVLPVLDRVVILPEVQKLPGGKESWEWN 704
           +  D+    RW VAK+WNPCPIGMLP  LGS+G LP LD   +  E+  L G   +WE  
Sbjct: 442 ADGDLKGGDRWAVAKSWNPCPIGMLPRDLGSSGCLPDLDHHYVDKELVNLSG--RTWELK 499

Query: 703 TCSGM---------------------TYDVGLLEKTNAIEERNAVEDGQADDPDLLL-NP 590
            C G+                     +YD+ LL++++  + R  VE  ++   D LL   
Sbjct: 500 QCGGVEEPSSDIHSNNSQVERSKREASYDICLLDRSSVKKMREMVESYESGGKDALLPTD 559

Query: 589 VKGQLMIGGVYKKVWAEELLAIESAVRILV 500
           +KG LMI GV+KK+  EELLAI+S +RILV
Sbjct: 560 IKGCLMINGVWKKIEEEELLAIKSGIRILV 589


>ref|XP_002314010.1| predicted protein [Populus trichocarpa] gi|222850418|gb|EEE87965.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 65/150 (43%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
 Frame = -1

Query: 916 RNKGKAASMVASSADINSEGRWKVAKAWNPCPIGMLPCALGSTGVLPVLDRVVILPEVQK 737
           R K K A    +  D+ S GRW VAK+WNPCPIGMLP  LGS+G LPVLD      +   
Sbjct: 470 RTKSKVAKR--TDGDVGSSGRWIVAKSWNPCPIGMLPRDLGSSGCLPVLDCDDDGKKSVH 527

Query: 736 LPGGKESWE---WNTCSGMT-------YDVGLLEKTNAIEERNAVEDGQADDPDLLLN-P 590
               K+ WE   + T    T        D+ LL+K +  + R   +  +++  ++LL+  
Sbjct: 528 ASERKQIWELKQYYTSVERTGSKREADSDIYLLDKASVKKMRETADSFESEGENVLLSKD 587

Query: 589 VKGQLMIGGVYKKVWAEELLAIESAVRILV 500
            KG LMI GV+KKV  EELLAI S VRILV
Sbjct: 588 DKGCLMINGVWKKVGEEELLAIMSDVRILV 617


>ref|XP_002298459.1| predicted protein [Populus trichocarpa] gi|222845717|gb|EEE83264.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 64/157 (40%), Positives = 85/157 (54%), Gaps = 18/157 (11%)
 Frame = -1

Query: 916 RNKGKAASMVASSADINSEGRWKVAKAWNPCPIGMLPCALGSTGVLPVLDRVVILPEVQK 737
           R K KA     +  ++ S G W VAK+WNPCPIGMLP  LGS+G LPVLD      +   
Sbjct: 472 RTKSKAVKR--TDGEVGSSGGWAVAKSWNPCPIGMLPRDLGSSGHLPVLDCADDGKKPVH 529

Query: 736 LPGGKESWEWNTCSG----MTY-------------DVGLLEKTNAIEERNAVEDGQADDP 608
               K+SWE    S      +Y             D+ LL+K++A + R   +  ++D  
Sbjct: 530 SSEWKQSWELKQGSSGDIRFSYGVERTSSKREAGCDIYLLDKSSAKKMRETADSFESDCE 589

Query: 607 DLLLN-PVKGQLMIGGVYKKVWAEELLAIESAVRILV 500
           ++LL+   KG LMI GV+KK+  EELL I S VRILV
Sbjct: 590 NVLLSGDDKGCLMINGVWKKIGEEELLTIMSDVRILV 626


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