BLASTX nr result

ID: Coptis23_contig00017245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017245
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331186.1| predicted protein [Populus trichocarpa] gi|2...   115   8e-24
ref|XP_004141816.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   109   8e-22
ref|XP_002272317.2| PREDICTED: uncharacterized protein LOC100265...   105   1e-20
ref|XP_004155965.1| PREDICTED: uncharacterized LOC101212313 [Cuc...   101   2e-19
ref|XP_003627348.1| Protein FAM48A [Medicago truncatula] gi|3555...    97   4e-18

>ref|XP_002331186.1| predicted protein [Populus trichocarpa] gi|222873307|gb|EEF10438.1|
            predicted protein [Populus trichocarpa]
          Length = 1341

 Score =  115 bits (289), Expect = 8e-24
 Identities = 73/178 (41%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
 Frame = +3

Query: 3    GFSMLGQTLNRSNINPLQRTNLAAMGPPKMIPGPNFFMNXXXXXXXXXXXXXXXXXXXXX 182
            GFSMLGQ LNR+N+N +QR+ +  MGPPKM+ G N +M                      
Sbjct: 1163 GFSMLGQPLNRTNMNVIQRSPMGHMGPPKMMAGMNHYMQQQQLQQQQQQLQQQQQPQLQQ 1222

Query: 183  XXXXXXXXI-----------SSPLQAVVSSPQVGSPSAMAXXXXXXXXXXXXXXXXXXXX 329
                                +S LQAVV+  QVGSPS M                     
Sbjct: 1223 LQQQLQPHQHQQLLLQQQQETSSLQAVVAPSQVGSPSTMGIPLLNQQTQQQPSPQQMSQR 1282

Query: 330  XXMSPRLSSGTLPPLNTTNAGTGPPSPQLSSQTLGSVGSITSSSMELQGVNKSNSMNN 503
              MSP+LSSG +  +++ N   GP SPQLSSQTLGSVGSIT+S MELQ VNK NS++N
Sbjct: 1283 TPMSPQLSSGAIHAISSGNPEAGPASPQLSSQTLGSVGSITNSPMELQAVNKRNSVSN 1340


>ref|XP_004141816.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101212313
            [Cucumis sativus]
          Length = 1307

 Score =  109 bits (272), Expect = 8e-22
 Identities = 72/170 (42%), Positives = 91/170 (53%), Gaps = 3/170 (1%)
 Frame = +3

Query: 3    GFSMLGQTLNRSNINPLQRTNLAAMGPPKMIPGPNFFMNXXXXXXXXXXXXXXXXXXXXX 182
            G SMLGQTLNR+++ P+QR  + +MGPPK++ G N +MN                     
Sbjct: 1142 GLSMLGQTLNRASLTPMQRA-VVSMGPPKLVTGMNPYMNQQQQQQLQQQIQQQQLQPQQL 1200

Query: 183  XXXXXXXXISSPLQAVVSSPQVGSPSAMAXXXXXXXXXXXXXXXXXXXXXX--MSPR-LS 353
                     ++PLQAVVS  QVGSPS M                         MSP+ +S
Sbjct: 1201 QHPET----TTPLQAVVSPQQVGSPSTMGVQQLNQQQQQQQTASPQQMNQRTPMSPQQMS 1256

Query: 354  SGTLPPLNTTNAGTGPPSPQLSSQTLGSVGSITSSSMELQGVNKSNSMNN 503
            SGT+  L+  N    P SPQLSSQTLGSV SI +S M++QGVNKSNS+NN
Sbjct: 1257 SGTIHALSAGNPEVCPASPQLSSQTLGSVSSIANSPMDMQGVNKSNSVNN 1306


>ref|XP_002272317.2| PREDICTED: uncharacterized protein LOC100265246 [Vitis vinifera]
          Length = 1359

 Score =  105 bits (261), Expect = 1e-20
 Identities = 76/202 (37%), Positives = 92/202 (45%), Gaps = 35/202 (17%)
 Frame = +3

Query: 3    GFSMLGQTLNRSNINPLQRTNLAAMGPPKMIPGPNFFMNXXXXXXXXXXXXXXXXXXXXX 182
            G SMLGQ L+R  +NP+QRT +  MGPPK++ G N +MN                     
Sbjct: 1158 GLSMLGQNLHRP-MNPMQRTGMGPMGPPKLMTGMNLYMNQQQQPQQQFHLQQMQQQQQHH 1216

Query: 183  XXXXXXXX----------------ISSPLQAVVSSPQVGSPSAMAXXXXXXXXXXXXXXX 314
                                     +SPLQAVVS PQVGSPS M                
Sbjct: 1217 QQQQLQQQQLQQQQQQLQQQHQQETTSPLQAVVSPPQVGSPSTMGIPQQLNQQPQQQQPQ 1276

Query: 315  XXXXXXX------------------MSPR-LSSGTLPPLNTTNAGTGPPSPQLSSQTLGS 437
                                     MSP+ +SSG + P+ T N    P SPQLSSQTLGS
Sbjct: 1277 QQQASPQQMNQRTPMSPQQMNQRTPMSPQQMSSGAVHPMGTGNPEACPASPQLSSQTLGS 1336

Query: 438  VGSITSSSMELQGVNKSNSMNN 503
            VGSIT+S M+LQGVNKSNS++N
Sbjct: 1337 VGSITNSPMDLQGVNKSNSVSN 1358


>ref|XP_004155965.1| PREDICTED: uncharacterized LOC101212313 [Cucumis sativus]
          Length = 1331

 Score =  101 bits (252), Expect = 2e-19
 Identities = 72/190 (37%), Positives = 91/190 (47%), Gaps = 23/190 (12%)
 Frame = +3

Query: 3    GFSMLGQTLNRSNINPLQRTNLAAMGPPKMIPGPNFFMNXXXXXXXXXXXXXXXXXXXXX 182
            G SMLGQTLNR+++ P+QR  + +MGPPK++ G N +MN                     
Sbjct: 1142 GLSMLGQTLNRASLTPMQRA-VVSMGPPKLVTGMNPYMNQQQQQQLQQQIQQQQQQQMQQ 1200

Query: 183  XXXXXXXX--------------------ISSPLQAVVSSPQVGSPSAMAXXXXXXXXXXX 302
                                         ++PLQAVVS  QVGSPS M            
Sbjct: 1201 QQQQQQQQQQQQPPQQQQLQPQQLQHPETTTPLQAVVSPQQVGSPSTMGVQQLNQQQQQQ 1260

Query: 303  XXXXXXXXXXX--MSPR-LSSGTLPPLNTTNAGTGPPSPQLSSQTLGSVGSITSSSMELQ 473
                         MSP+ +SSGT+  L+  N    P SPQLSSQTLGSV SI +S M++Q
Sbjct: 1261 QTASPQQMNQRTPMSPQQMSSGTIHALSAGNPEVCPASPQLSSQTLGSVSSIANSPMDMQ 1320

Query: 474  GVNKSNSMNN 503
            GVNKSNS+NN
Sbjct: 1321 GVNKSNSVNN 1330


>ref|XP_003627348.1| Protein FAM48A [Medicago truncatula] gi|355521370|gb|AET01824.1|
            Protein FAM48A [Medicago truncatula]
          Length = 1296

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 70/181 (38%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
 Frame = +3

Query: 9    SMLGQTL-NRSNINPLQRTNLAAMGPPKMIPGPNFFMNXXXXXXXXXXXXXXXXXXXXXX 185
            S+L Q+L NR+N++ LQR  +  MGPPK++P  + +MN                      
Sbjct: 1115 SLLSQSLSNRTNMSTLQRA-MGPMGPPKLMPAMSLYMNRQQQQQHQQSQQQQHQQQLQLQ 1173

Query: 186  XXXXXXX--------------ISSPLQAVVSSPQVGSPSAMAXXXXXXXXXXXXXXXXXX 323
                                  +S LQAVVS PQVGSPS M                   
Sbjct: 1174 QQQQHIQQQLQQQLQQQQQQETTSQLQAVVSPPQVGSPSTMGVSSLSQQTHQQASPQQMS 1233

Query: 324  XXXXMSPR-LSSGTLPPLNTTNAGTGPPSPQLSSQTLGSVGSITSSSMELQGVNKSNSMN 500
                MSP+ +SSG +  +N  N   GP SPQLSSQTLGSV SIT+S M++QGVNKSNS+N
Sbjct: 1234 QRTPMSPQQMSSGAIHGMNAGNP-EGPASPQLSSQTLGSVSSITNSPMDMQGVNKSNSVN 1292

Query: 501  N 503
            N
Sbjct: 1293 N 1293


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