BLASTX nr result

ID: Coptis23_contig00017236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017236
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26236.1| unknown [Picea sitchensis]                             120   9e-26
ref|XP_002283455.1| PREDICTED: uncharacterized protein C20orf24 ...   116   2e-24
gb|ACJ84168.1| unknown [Medicago truncatula]                          111   7e-23
ref|XP_002866329.1| hypothetical protein ARALYDRAFT_919171 [Arab...   110   9e-23
ref|XP_003597363.1| hypothetical protein MTR_2g097270 [Medicago ...   110   9e-23

>gb|ABK26236.1| unknown [Picea sitchensis]
          Length = 126

 Score =  120 bits (302), Expect = 9e-26
 Identities = 52/69 (75%), Positives = 64/69 (92%)
 Frame = +3

Query: 30  GEVPPFNYSKLLDPDASWDKDQLGDVLHWIRQGAGLLCGLLFGSIPVVGALWILIFLVLS 209
           GEVPPF+++KLLDP+ASWDKDQLGDVLHWIRQ   L+CGLL+G+IP+VGA+WI++FL+LS
Sbjct: 17  GEVPPFSFNKLLDPEASWDKDQLGDVLHWIRQAVALICGLLWGAIPLVGAIWIVLFLLLS 76

Query: 210 SAIVYGYYA 236
           S IVY YYA
Sbjct: 77  SGIVYCYYA 85


>ref|XP_002283455.1| PREDICTED: uncharacterized protein C20orf24 homolog [Vitis
           vinifera] gi|297746059|emb|CBI16115.3| unnamed protein
           product [Vitis vinifera]
          Length = 129

 Score =  116 bits (290), Expect = 2e-24
 Identities = 48/69 (69%), Positives = 61/69 (88%)
 Frame = +3

Query: 30  GEVPPFNYSKLLDPDASWDKDQLGDVLHWIRQGAGLLCGLLFGSIPVVGALWILIFLVLS 209
           G + PF ++KLLDP+ASWDKDQLGDVLHWIRQ   L+CGLL+GSIP+VG +WI++FL++S
Sbjct: 20  GHLSPFKFAKLLDPEASWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWIILFLLIS 79

Query: 210 SAIVYGYYA 236
           S I+YGYYA
Sbjct: 80  SGIIYGYYA 88


>gb|ACJ84168.1| unknown [Medicago truncatula]
          Length = 124

 Score =  111 bits (277), Expect = 7e-23
 Identities = 47/69 (68%), Positives = 58/69 (84%)
 Frame = +3

Query: 30  GEVPPFNYSKLLDPDASWDKDQLGDVLHWIRQGAGLLCGLLFGSIPVVGALWILIFLVLS 209
           G + PF ++KLLDP+ASWDKDQLGDVLHWIRQ  GL+ GLL+G+ PVVG  W ++FLVLS
Sbjct: 15  GHLSPFKFAKLLDPEASWDKDQLGDVLHWIRQATGLVFGLLWGAFPVVGGFWFMLFLVLS 74

Query: 210 SAIVYGYYA 236
           S I+YGYY+
Sbjct: 75  SGIIYGYYS 83


>ref|XP_002866329.1| hypothetical protein ARALYDRAFT_919171 [Arabidopsis lyrata subsp.
           lyrata] gi|297312164|gb|EFH42588.1| hypothetical protein
           ARALYDRAFT_919171 [Arabidopsis lyrata subsp. lyrata]
          Length = 129

 Score =  110 bits (276), Expect = 9e-23
 Identities = 48/65 (73%), Positives = 56/65 (86%)
 Frame = +3

Query: 42  PFNYSKLLDPDASWDKDQLGDVLHWIRQGAGLLCGLLFGSIPVVGALWILIFLVLSSAIV 221
           P   +KL DPDASWDKDQLGDVLHWIRQ  GL+CGLL+GSIP+VG +WI++FL +SS IV
Sbjct: 24  PSKLAKLFDPDASWDKDQLGDVLHWIRQVVGLICGLLWGSIPLVGGIWIILFLAISSGIV 83

Query: 222 YGYYA 236
           YGYYA
Sbjct: 84  YGYYA 88


>ref|XP_003597363.1| hypothetical protein MTR_2g097270 [Medicago truncatula]
           gi|217075418|gb|ACJ86069.1| unknown [Medicago
           truncatula] gi|217075680|gb|ACJ86200.1| unknown
           [Medicago truncatula] gi|355486411|gb|AES67614.1|
           hypothetical protein MTR_2g097270 [Medicago truncatula]
           gi|388520519|gb|AFK48321.1| unknown [Medicago
           truncatula]
          Length = 124

 Score =  110 bits (276), Expect = 9e-23
 Identities = 47/69 (68%), Positives = 58/69 (84%)
 Frame = +3

Query: 30  GEVPPFNYSKLLDPDASWDKDQLGDVLHWIRQGAGLLCGLLFGSIPVVGALWILIFLVLS 209
           G + PF ++KLLDP+ASWDKDQLGDVLHWIRQ  GL+ GLL+G+ PVVG  W ++FLVLS
Sbjct: 15  GHLSPFKFAKLLDPEASWDKDQLGDVLHWIRQAMGLVFGLLWGAFPVVGGFWFMLFLVLS 74

Query: 210 SAIVYGYYA 236
           S I+YGYY+
Sbjct: 75  SGIIYGYYS 83


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