BLASTX nr result

ID: Coptis23_contig00017234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017234
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555886.1| PREDICTED: uncharacterized protein LOC100809...   127   1e-27
ref|XP_003536695.1| PREDICTED: uncharacterized protein LOC100776...   127   1e-27
emb|CBI31404.3| unnamed protein product [Vitis vinifera]              127   1e-27
gb|ACU23136.1| unknown [Glycine max]                                  127   1e-27
ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleop...   127   1e-27

>ref|XP_003555886.1| PREDICTED: uncharacterized protein LOC100809519 [Glycine max]
          Length = 279

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/102 (60%), Positives = 68/102 (66%)
 Frame = +3

Query: 3   IMLERDTGRPRGFGFVTFADHRGMEDAIREMHGRELGDRIISVNKAQPKMXXXXXXXXXX 182
           IM+ERDTGRPRGFGF+TFAD RGMEDAI+EMHGRE+GDRIISVNKAQPKM          
Sbjct: 38  IMMERDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKM--GGDDVDQG 95

Query: 183 XXXXXXXXXXXXXXXXXXXXXTECFKCGRPGHWARECPSAGG 308
                                 +CFKCGRPGHWAR+CP AGG
Sbjct: 96  YRGGYSSGGRGSYGAGDRVGQDDCFKCGRPGHWARDCPLAGG 137


>ref|XP_003536695.1| PREDICTED: uncharacterized protein LOC100776333 [Glycine max]
          Length = 279

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/102 (60%), Positives = 68/102 (66%)
 Frame = +3

Query: 3   IMLERDTGRPRGFGFVTFADHRGMEDAIREMHGRELGDRIISVNKAQPKMXXXXXXXXXX 182
           IM+ERDTGRPRGFGF+TFAD RGMEDAI+EMHGRE+GDRIISVNKAQPKM          
Sbjct: 38  IMMERDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKM--GGDDADQG 95

Query: 183 XXXXXXXXXXXXXXXXXXXXXTECFKCGRPGHWARECPSAGG 308
                                 +CFKCGRPGHWAR+CP AGG
Sbjct: 96  YRGGYSSGGRGSYGAGDRVGQDDCFKCGRPGHWARDCPLAGG 137


>emb|CBI31404.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/102 (60%), Positives = 68/102 (66%)
 Frame = +3

Query: 3   IMLERDTGRPRGFGFVTFADHRGMEDAIREMHGRELGDRIISVNKAQPKMXXXXXXXXXX 182
           IMLERDTGRPRGFGF+T+AD RGMEDAIREMHGR+ GDRIISVNKAQPKM          
Sbjct: 54  IMLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKM--GEDPDHGY 111

Query: 183 XXXXXXXXXXXXXXXXXXXXXTECFKCGRPGHWARECPSAGG 308
                                 +CFKCGRPGHWAR+CPS+GG
Sbjct: 112 NGGYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSSGG 153


>gb|ACU23136.1| unknown [Glycine max]
          Length = 279

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/102 (60%), Positives = 68/102 (66%)
 Frame = +3

Query: 3   IMLERDTGRPRGFGFVTFADHRGMEDAIREMHGRELGDRIISVNKAQPKMXXXXXXXXXX 182
           IM+ERDTGRPRGFGF+TFAD RGMEDAI+EMHGRE+GDRIISVNKAQPKM          
Sbjct: 38  IMMERDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKM--GGDDVDQG 95

Query: 183 XXXXXXXXXXXXXXXXXXXXXTECFKCGRPGHWARECPSAGG 308
                                 +CFKCGRPGHWAR+CP AGG
Sbjct: 96  YRGGYSSGGRGSYGAGDRVGQDDCFKCGRPGHWARDCPLAGG 137


>ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis
           vinifera]
          Length = 278

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/102 (60%), Positives = 68/102 (66%)
 Frame = +3

Query: 3   IMLERDTGRPRGFGFVTFADHRGMEDAIREMHGRELGDRIISVNKAQPKMXXXXXXXXXX 182
           IMLERDTGRPRGFGF+T+AD RGMEDAIREMHGR+ GDRIISVNKAQPKM          
Sbjct: 38  IMLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKM--GEDPDHGY 95

Query: 183 XXXXXXXXXXXXXXXXXXXXXTECFKCGRPGHWARECPSAGG 308
                                 +CFKCGRPGHWAR+CPS+GG
Sbjct: 96  NGGYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSSGG 137


Top