BLASTX nr result

ID: Coptis23_contig00017230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00017230
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519325.1| DNA binding protein, putative [Ricinus commu...    62   4e-08
ref|XP_002315467.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]    59   5e-07
ref|XP_002312763.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245...    58   7e-07

>ref|XP_002519325.1| DNA binding protein, putative [Ricinus communis]
           gi|223541640|gb|EEF43189.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 186

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/64 (54%), Positives = 46/64 (71%)
 Frame = +2

Query: 8   IDVNLARVLVAASKIASISMGKAAIGKRVEAENRLKESALARKVAIEALELFAVADDNEK 187
           ID++ AR LVAA+KIA++SM KAA   R+EAE R+KE+ LA+K A EALE  A     +K
Sbjct: 111 IDIDSARALVAAAKIAAVSMAKAAALARLEAERRVKEATLAKKRAREALERLAFLSAQDK 170

Query: 188 GKNS 199
            K+S
Sbjct: 171 LKHS 174


>ref|XP_002315467.1| predicted protein [Populus trichocarpa] gi|222864507|gb|EEF01638.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 45/94 (47%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
 Frame = +2

Query: 2   KIIDVNLARVLVAASKIASISMGKAAIGKRVEAENRLKESALARKVAIEALELFA--VAD 175
           + ID + AR LVAA+KIASISM KAA   RVEAE R+KE+  A+K A EALE  A   A 
Sbjct: 114 RFIDKDSARALVAAAKIASISMTKAAALARVEAEKRVKEATYAKKRAREALERLAYLAAK 173

Query: 176 DNEKGKNSEKDSMMSAI--DGMDEKSVKMNNVVG 271
           +NE         MM  I   G+D+ + K  N  G
Sbjct: 174 ENE---------MMEDIKGGGVDDAANKRGNSNG 198


>emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]
          Length = 1076

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
 Frame = +2

Query: 2    KIIDVNLARVLVAASKIASISMGKAAIGKRVEAENRLKESALARKVAIEALELFAVADDN 181
            + ID+N A+V+  A++I+ ++M KAA+  R E+E R+KE+A A+K A E+L+        
Sbjct: 877  RYIDLNSAKVVACAARISFLTMRKAAVASRGESERRVKEAAFAKKRARESLQ-------- 928

Query: 182  EKGKNSEKDSMMSAIDGMDEKSVKMNNVVG--DVIADDKQSHKKMKTDRKEDKSVKVKVN 355
                N+ K+   S +    +K  K N +VG   VI  ++  +     D   D S +V  N
Sbjct: 929  HVESNAAKEKARSVVVDAKDKIGKGNCIVGGVGVILAERDRYPNDDRDDGLDNSCEVSAN 988

Query: 356  LNNLGCSENVMDKNEKGLVMSSMDRKEK 439
            L +         ++    V  S D KE+
Sbjct: 989  LEDKERMAGFRAQSISNGVSMSTDDKER 1016


>ref|XP_002312763.1| predicted protein [Populus trichocarpa] gi|222852583|gb|EEE90130.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/62 (54%), Positives = 43/62 (69%)
 Frame = +2

Query: 2   KIIDVNLARVLVAASKIASISMGKAAIGKRVEAENRLKESALARKVAIEALELFAVADDN 181
           +IID + AR LVAA+KIA++SM KAA   +VEAE R+KE+  A+K A EALE  A     
Sbjct: 114 RIIDRDSARALVAAAKIAAVSMTKAAAMAKVEAEKRVKEATYAKKRAREALERLAYLAAK 173

Query: 182 EK 187
           EK
Sbjct: 174 EK 175


>ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245891 [Vitis vinifera]
          Length = 314

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
 Frame = +2

Query: 2   KIIDVNLARVLVAASKIASISMGKAAIGKRVEAENRLKESALARKVAIEALELFAVADDN 181
           + ID+N A+V+  A++I+ ++M KAA+  R E+E R+KE+A A+K A E+L+        
Sbjct: 115 RYIDLNSAKVVACAARISFLTMRKAAVASRGESERRVKEAAFAKKRARESLQ-------- 166

Query: 182 EKGKNSEKDSMMSAIDGMDEKSVKMNNVVGDVIADDKQSHKKMKTDRKE--DKSVKVKVN 355
               N+ K+   S +    +K  K N +VG V     +  +    DR +  D S +V  N
Sbjct: 167 HVESNAAKEKARSVVVDAKDKIGKGNCIVGGVGMTLAERDRYPNDDRDDGLDNSCEVSAN 226

Query: 356 LNNLGCSENVMDKNEKGLVMSSMDRKEK 439
           L +         ++    V  S D KE+
Sbjct: 227 LEDKERMTGFRAQSISNGVSMSTDDKER 254


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